version 1.0
Rhodobacter sphaeroides ATCC 17025, complete genome - 1..3217726 3111 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2303 72.24 +1 2370766..2374209 - 1147 146278361 - Rsph17025_2326 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 2304 69.08 0 2374320..2374775 + 151 146278362 - Rsph17025_2327 - AsnC family transcriptional regulator 2305 70.11 0 2374812..2375855 - 347 146278363 - Rsph17025_2328 - diguanylate cyclase 2306 67.37 0 2376023..2377018 - 331 146278364 - Rsph17025_2329 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 2307 68.15 0 2377166..2377705 + 179 146278365 - Rsph17025_2330 - hypothetical protein 2308 72.69 +1 2377763..2378692 + 309 146278366 - Rsph17025_2331 - hypothetical protein 2309 70.19 0 2378720..2379571 + 283 146278367 - Rsph17025_2332 - CHAD domain-containing protein 2310 71.27 0 2379568..2380587 - 339 146278368 - Rsph17025_2333 - diguanylate cyclase 2311 69.05 0 2380587..2381174 - 195 146278369 - Rsph17025_2334 - heme NO binding domain-containing protein 2312 72.66 +1 2381237..2382955 - 572 146278370 - Rsph17025_2335 - hypothetical protein 2313 71.55 0 2383059..2383754 - 231 146278371 - Rsph17025_2336 - HAD family hydrolase 2314 72.44 +1 2384212..2385597 + 461 146278372 - Rsph17025_2337 - response regulator receiver modulated diguanylate cyclase 2315 72.87 +1 2385679..2386194 - 171 146278373 - Rsph17025_2338 - hypothetical protein 2316 71.43 0 2386198..2386554 - 118 146278374 - Rsph17025_2339 - hypothetical protein 2317 73.40 +1 2386556..2387149 - 197 146278375 - Rsph17025_2340 - RNA polymerase sigma factor 2318 69.60 0 2387231..2387605 - 124 146278376 - Rsph17025_2341 - signal transduction protein 2319 66.18 0 2388065..2388475 + 136 146278377 - Rsph17025_2342 - hypothetical protein 2320 73.51 +1 2388444..2389130 + 228 146278378 - Rsph17025_2343 - NUDIX hydrolase 2321 70.93 0 2389138..2389512 - 124 146278379 - Rsph17025_2344 - hypothetical protein 2322 74.01 +1 2389528..2390031 - 167 146278380 - Rsph17025_2345 - Lipocalin family protein 2323 71.99 +1 2390019..2390450 - 143 146278381 - Rsph17025_2346 - hypothetical protein 2324 70.02 0 2390533..2391576 - 347 146278382 - Rsph17025_2347 - aldo/keto reductase 2325 75.76 +2 2391682..2392275 + 197 146278383 - Rsph17025_2348 - hypothetical protein 2326 66.72 0 2392383..2394101 + 572 146278384 - Rsph17025_2349 - methionyl-tRNA synthetase 2327 69.43 0 2394240..2396738 - 832 146278385 - Rsph17025_2350 - cyclic nucleotide-binding protein 2328 62.12 -1 2396814..2397143 - 109 146278386 - Rsph17025_2351 - hypothetical protein 2329 71.15 0 2397444..2398760 - 438 146278387 - Rsph17025_2352 - polyferredoxin-like protein 2330 69.31 0 2398906..2400762 + 618 146278388 - Rsph17025_2353 - ABC transporter related 2331 67.12 0 2400805..2401023 - 72 146278389 - Rsph17025_2354 - hypothetical protein 2332 73.50 +1 2401230..2402165 + 311 146278390 - Rsph17025_2355 - cobalamin biosynthesis protein CobD 2333 66.99 0 2402181..2403401 - 406 146278391 - Rsph17025_2356 - SufS subfamily cysteine desulfurase 2334 68.39 0 2403410..2403988 - 192 146278392 - Rsph17025_2357 - hypothetical protein 2335 66.67 0 2403985..2404464 - 159 146278393 - Rsph17025_2358 - hypothetical protein 2336 66.98 0 2404465..2405748 - 427 146278394 - Rsph17025_2359 - SufBD protein 2337 64.43 -1 2405748..2406506 - 252 146278395 - Rsph17025_2360 - FeS assembly ATPase SufC 2338 66.35 0 2406516..2406827 - 103 146278396 - Rsph17025_2361 - hypothetical protein 2339 64.18 -1 2407036..2408565 - 509 146278397 - Rsph17025_2362 - cysteine desulfurase activator complex subunit SufB 2340 70.77 0 2408641..2409687 - 348 146278398 - Rsph17025_2363 - cysteine desulfurase 2341 62.61 -1 2409769..2410236 - 155 146278399 - Rsph17025_2364 - BadM/Rrf2 family transcriptional regulator 2342 61.98 -1 2410324..2411049 + 241 146278400 - Rsph17025_2365 - alpha/beta fold family hydrolase-like protein 2343 68.89 0 2411046..2411630 + 194 146278401 - Rsph17025_2366 - HD superfamily hydrolase-like protein 2344 64.44 -1 2411716..2412930 + 404 146278402 - Rsph17025_2367 - isocitrate dehydrogenase 2345 65.04 0 2413130..2413744 + 204 146278403 - Rsph17025_2368 - hypothetical protein 2346 67.44 0 2413843..2415663 + 606 146278404 - Rsph17025_2369 - GTP-binding protein TypA 2347 69.94 0 2415698..2416492 - 264 146278405 - Rsph17025_2370 - glutamine amidotransferase-like protein 2348 68.73 0 2416645..2416935 - 96 146278406 - Rsph17025_2371 - hypothetical protein 2349 66.97 0 2416937..2419588 - 883 146278407 alaS Rsph17025_2372 - alanyl-tRNA synthetase 2350 61.92 -1 2419676..2420749 - 357 146278408 recA Rsph17025_2373 - recombinase A 2351 63.62 -1 2420947..2421537 + 196 146278409 - Rsph17025_2374 - hypothetical protein 2352 66.54 0 2421541..2423841 - 766 146278410 - Rsph17025_2375 - integral membrane sensor hybrid histidine kinase 2353 73.92 +1 2423945..2425144 - 399 146278411 - Rsph17025_2376 - Fmu (Sun) domain-containing protein 2354 67.85 0 2425198..2425959 + 253 146278412 - Rsph17025_2377 - DeoR family transcriptional regulator 2355 72.08 +1 2425969..2426652 - 227 146278413 - Rsph17025_2378 - hypothetical protein 2356 68.19 0 2426654..2427112 - 152 146278414 - Rsph17025_2379 - hypothetical protein 2357 64.92 0 2427368..2428453 + 361 146278415 - Rsph17025_2380 - hypothetical protein 2358 65.62 0 2428529..2428816 + 95 146278416 - Rsph17025_2381 - hypothetical protein 2359 68.96 0 2428795..2431980 - 1061 146278417 - Rsph17025_2382 - acriflavin resistance protein 2360 73.47 +1 2431973..2432971 - 332 146278418 - Rsph17025_2383 - RND family efflux transporter MFP subunit 2361 68.81 0 2433063..2433950 - 295 146278419 - Rsph17025_2384 - cation diffusion facilitator family transporter 2362 70.90 0 2434081..2434977 - 298 146278420 - Rsph17025_2385 - peptidase U32 2363 69.62 0 2434982..2435962 - 326 146278421 - Rsph17025_2386 - peptidase U32 2364 71.05 0 2435962..2436486 - 174 146278422 - Rsph17025_2387 - putative lipid carrier protein-like protein 2365 70.75 0 2436611..2438104 + 497 146278423 - Rsph17025_2388 - UbiD family decarboxylase 2366 73.51 +1 2438101..2438655 + 184 146278424 - Rsph17025_2389 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2367 69.27 0 2438674..2439864 - 396 146278425 - Rsph17025_2390 - hypothetical protein 2368 66.26 0 2439936..2440910 - 324 146278426 - Rsph17025_2391 - C4-dicarboxylate transporter/malic acid transport protein 2369 73.25 +1 2441040..2442557 - 505 146278427 - Rsph17025_2392 - kinase-like protein 2370 63.66 -1 2442705..2443037 + 110 146278428 - Rsph17025_2393 - hypothetical protein 2371 69.43 0 2443160..2443882 + 240 146278429 - Rsph17025_2394 - endonuclease/exonuclease/phosphatase 2372 70.21 0 2443879..2445429 + 516 146278430 - Rsph17025_2395 - phospholipase D/transphosphatidylase 2373 67.56 0 2445650..2446099 + 149 146278431 - Rsph17025_2396 - cytochrome c, class II 2374 68.17 0 2446103..2446699 + 198 146278432 - Rsph17025_2397 - cytochrome B561 2375 69.15 0 2446746..2447390 - 214 146278433 - Rsph17025_2398 - L-fuculose-phosphate aldolase 2376 69.78 0 2447547..2448221 + 224 146278434 - Rsph17025_2399 - hypothetical protein 2377 74.42 +1 2448278..2449774 + 498 146278435 - Rsph17025_2400 - hypothetical protein 2378 65.07 0 2450312..2450686 - 124 146278436 - Rsph17025_2402 - IS66 Orf2 family protein 2379 70.87 0 2450743..2451885 - 380 146278437 - Rsph17025_2403 - lysine--tRNA ligase 2380 64.37 -1 2451897..2452463 + 188 146278438 - Rsph17025_2404 - elongation factor P 2381 70.58 0 2452534..2453913 - 459 146278439 - Rsph17025_2405 - fructuronate reductase 2382 69.97 0 2453903..2454628 - 241 146278440 - Rsph17025_2406 - 2-deoxy-D-gluconate 3-dehydrogenase 2383 67.03 0 2454625..2455449 - 274 146278441 - Rsph17025_2407 - 5-keto-4-deoxyuronate isomerase 2384 67.66 0 2455461..2455763 - 100 146278442 - Rsph17025_2408 - cupin 2 domain-containing protein 2385 66.74 0 2455772..2457052 - 426 146278443 - Rsph17025_2409 - TRAP dicarboxylate transporter, DctM subunit 2386 67.40 0 2457055..2457600 - 181 146278444 - Rsph17025_2410 - tripartite ATP-independent periplasmic transporter DctQ 2387 63.39 -1 2457659..2458636 - 325 146278445 - Rsph17025_2411 - TRAP dicarboxylate transporter, DctP subunit 2388 68.87 0 2458662..2460068 - 468 146278446 - Rsph17025_2412 - glucuronate isomerase 2389 66.95 0 2460172..2460888 + 238 146278447 - Rsph17025_2413 - GntR family transcriptional regulator 2390 72.72 +1 2460870..2461778 + 302 146278448 - Rsph17025_2414 - ribokinase-like domain-containing protein 2391 71.09 0 2461791..2463215 - 474 146278449 - Rsph17025_2415 - hypothetical protein 2392 72.72 +1 2463215..2465164 - 649 146278450 - Rsph17025_2416 - hypothetical protein 2393 73.17 +1 2465489..2466703 + 404 146278451 - Rsph17025_2417 - peptidase S1 and S6, chymotrypsin/Hap 2394 73.99 +1 2466703..2467794 + 363 146278452 - Rsph17025_2418 - hypothetical protein 2395 70.91 0 2467798..2469093 + 431 146278453 - Rsph17025_2419 - hypothetical protein 2396 72.02 +1 2469090..2471498 + 802 146278454 - Rsph17025_2420 - DNA/RNA non-specific endonuclease 2397 72.18 +1 2471609..2472007 + 132 146278455 - Rsph17025_2421 - rhodanese domain-containing protein 2398 70.05 0 2472034..2472624 + 196 146278456 - Rsph17025_2422 - two component LuxR family transcriptional regulator 2399 72.43 +1 2472851..2474863 + 670 146278457 - Rsph17025_2423 - PAS/PAC sensor hybrid histidine kinase 2400 68.59 0 2474860..2476263 - 467 146278458 - Rsph17025_2424 - glycoside hydrolase family protein 2401 69.03 0 2476436..2477449 - 337 146278459 - Rsph17025_2425 - NAD-dependent epimerase/dehydratase 2402 71.96 +1 2477515..2478591 - 358 146278460 - Rsph17025_2426 - hypothetical protein 68.34 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0