version 1.0
Rhodobacter sphaeroides ATCC 17025, complete genome - 1..3217726 3111 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2107 62.07 -1 2158656..2159351 + 231 146278165 - Rsph17025_2128 - putative phage repressor 2108 66.19 0 2160686..2161105 + 139 146278166 - Rsph17025_2129 - HNH endonuclease 2109 62.47 -1 2161300..2161704 - 134 146278167 - Rsph17025_2130 - integrase catalytic subunit 2110 65.48 0 2163560..2164483 + 307 146278168 - Rsph17025_2132 - IstB ATP binding domain-containing protein 2111 63.08 -1 2164504..2164893 + 129 146278169 - Rsph17025_2133 - transposase, IS4 family protein 2112 63.14 -1 2164890..2165201 + 103 146278170 - Rsph17025_2134 - IstB ATP binding domain-containing protein 2113 66.67 0 2165374..2165568 - 64 146278171 - Rsph17025_2135 - DNA replication protein-like protein 2114 65.08 0 2165664..2165852 - 62 146278172 - Rsph17025_2136 - prevent-host-death family protein 2115 71.26 0 2166588..2167196 - 202 146278173 - Rsph17025_2137 - lysine exporter protein LysE/YggA 2116 66.44 0 2167193..2167636 - 147 146278174 - Rsph17025_2138 - AsnC family transcriptional regulator 2117 67.51 0 2167775..2168368 - 197 146278175 - Rsph17025_2139 - hypothetical protein 2118 69.81 0 2168584..2170395 - 603 146278176 - Rsph17025_2140 - ABC transporter related 2119 73.28 +1 2170453..2171616 - 387 146278177 - Rsph17025_2141 - lipid-A-disaccharide synthase 2120 75.55 +2 2171613..2172434 - 273 146278178 - Rsph17025_2142 - hypothetical protein 2121 70.50 0 2172431..2173213 - 260 146278179 - Rsph17025_2143 - UDP-N-acetylglucosamine acyltransferase 2122 65.17 0 2173217..2173684 - 155 146278180 - Rsph17025_2144 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2123 75.31 +2 2173770..2174417 - 215 146278181 - Rsph17025_2145 - outer membrane chaperone Skp (OmpH) 2124 65.20 0 2174417..2176795 - 792 146278182 - Rsph17025_2146 - surface antigen (D15) 2125 68.72 0 2176907..2177101 - 64 146278183 - Rsph17025_2147 - hypothetical protein 2126 68.76 0 2177213..2178547 - 444 146278184 - Rsph17025_2148 - putative membrane-associated zinc metalloprotease 2127 68.61 0 2178554..2179738 - 394 146278185 - Rsph17025_2149 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2128 69.10 0 2179747..2180568 - 273 146278186 - Rsph17025_2150 - phosphatidate cytidylyltransferase 2129 69.51 0 2180565..2181302 - 245 146278187 - Rsph17025_2151 - undecaprenyl diphosphate synthase 2130 65.43 0 2181375..2181941 - 188 146278188 - Rsph17025_2152 - ribosome recycling factor 2131 67.07 0 2182028..2182768 - 246 146278189 - Rsph17025_2153 - uridylate kinase 2132 72.37 +1 2182917..2183792 + 291 146278190 - Rsph17025_2154 - tRNA delta(2)-isopentenylpyrophosphate transferase 2133 71.59 0 2183868..2184659 + 263 146278191 - Rsph17025_2155 - helix-turn-helix domain-containing protein 2134 68.75 0 2184746..2186377 + 543 146278192 - Rsph17025_2156 - extracellular solute-binding protein 2135 69.71 0 2186421..2187407 + 328 146278193 - Rsph17025_2157 - binding-protein-dependent transport systems inner membrane component 2136 69.70 0 2187407..2188561 + 384 146278194 - Rsph17025_2158 - binding-protein-dependent transport systems inner membrane component 2137 74.21 +1 2188554..2190608 + 684 146278195 - Rsph17025_2159 - oligopeptide/dipeptide ABC transporter, ATPase subunit 2138 68.58 0 2190580..2192043 - 487 146278196 engA Rsph17025_2160 - GTP-binding protein EngA 2139 72.67 +1 2192102..2193466 - 454 146278197 - Rsph17025_2161 - Pyrrolo-quinoline quinone 2140 73.92 +1 2193495..2194142 - 215 146278198 - Rsph17025_2162 - hypothetical protein 2141 67.23 0 2194376..2195263 + 295 146278199 - Rsph17025_2163 - hypothetical protein 2142 63.71 -1 2195315..2196463 + 382 146278200 - Rsph17025_2164 - membrane protein involved in aromatic hydrocarbon degradation 2143 65.86 0 2196636..2197505 + 289 146278201 - Rsph17025_2165 - hypothetical protein 2144 63.07 -1 2197533..2198450 + 305 146278202 - Rsph17025_2166 - homoserine O-succinyltransferase 2145 70.65 0 2198440..2199393 + 317 146278203 - Rsph17025_2167 - alpha/beta hydrolase fold 2146 66.89 0 2199435..2200319 + 294 146278204 - Rsph17025_2168 - hypothetical protein 2147 69.58 0 2200316..2200933 + 205 146278205 - Rsph17025_2169 - TetR family transcriptional regulator 2148 68.03 0 2201053..2202150 - 365 146278206 - Rsph17025_2170 - spermidine/putrescine ABC transporter ATPase subunit 2149 64.44 -1 2202147..2202953 - 268 146278207 - Rsph17025_2171 - binding-protein-dependent transport systems inner membrane component 2150 63.29 -1 2202950..2203837 - 295 146278208 - Rsph17025_2172 - binding-protein-dependent transport systems inner membrane component 2151 72.29 +1 2203916..2205319 - 467 146278209 - Rsph17025_2173 - GntR family transcriptional regulator 2152 73.33 +1 2205404..2205628 + 74 146278210 - Rsph17025_2174 - hypothetical protein 2153 67.70 0 2205754..2206236 - 160 146278211 rpsI Rsph17025_2175 - 30S ribosomal protein S9 2154 63.87 -1 2206240..2206704 - 154 146278212 rplM Rsph17025_2176 - 50S ribosomal protein L13 2155 72.62 +1 2206916..2207704 - 262 146278213 - Rsph17025_2177 - hypothetical protein 2156 65.54 0 2208273..2208806 + 177 146278214 - Rsph17025_2178 - dTDP-4-dehydrorhamnose 3,5-epimerase 2157 68.00 0 2208846..2210195 - 449 146278215 - Rsph17025_2179 - SAF domain-containing protein 2158 66.29 0 2210192..2211247 - 351 146278216 - Rsph17025_2180 - NAD-dependent epimerase/dehydratase 2159 74.49 +1 2211437..2212228 - 263 146278217 - Rsph17025_2181 - hypothetical protein 2160 72.47 +1 2212474..2213472 + 332 146278218 - Rsph17025_2182 - short chain dehydrogenase 2161 66.60 0 2213636..2215135 + 499 146278219 - Rsph17025_2183 - Acetyl-CoA hydrolase 2162 69.43 0 2215152..2217650 - 832 146278220 - Rsph17025_2184 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 2163 69.54 0 2217703..2217876 - 57 146278221 - Rsph17025_2185 - hypothetical protein 2164 72.26 +1 2218137..2218958 + 273 146278222 - Rsph17025_2186 - hypothetical protein 2165 67.88 0 2218999..2219985 - 328 146278223 - Rsph17025_2187 - glyoxylate reductase 2166 69.36 0 2220084..2220677 + 197 146278224 - Rsph17025_2188 - hypothetical protein 2167 65.39 0 2220978..2222618 - 546 146278225 groEL Rsph17025_2189 - chaperonin GroEL 2168 63.54 -1 2222703..2222990 - 95 146278226 groES Rsph17025_2190 - co-chaperonin GroES 2169 71.43 0 2223178..2224164 + 328 146278227 - Rsph17025_2191 - GumN family protein 2170 71.93 +1 2224217..2224330 - 37 146278228 - Rsph17025_2192 - hypothetical protein 2171 65.80 0 2224645..2225562 + 305 146278229 - Rsph17025_2193 - putative manganese-dependent inorganic pyrophosphatase 2172 68.90 0 2225697..2226590 + 297 146278230 - Rsph17025_2194 - HAD family hydrolase 2173 64.64 -1 2226805..2227248 + 147 146278231 - Rsph17025_2195 - dehydratase 2174 68.19 0 2227276..2228196 + 306 146278232 - Rsph17025_2196 - riboflavin biosynthesis protein RibF 2175 67.75 0 2228236..2228697 + 153 146278233 - Rsph17025_2197 - hypothetical protein 2176 72.71 +1 2228697..2229722 + 341 146278234 - Rsph17025_2198 - threonine aldolase 2177 64.31 -1 2229864..2230883 + 339 146278235 - Rsph17025_2199 - ribose-phosphate pyrophosphokinase 2178 69.17 0 2231062..2231460 - 132 146278236 - Rsph17025_2200 - F0F1 ATP synthase subunit epsilon 2179 66.04 0 2231470..2232897 - 475 146278237 - Rsph17025_2201 - F0F1 ATP synthase subunit beta 2180 66.21 0 2232915..2233784 - 289 146278238 - Rsph17025_2202 - F0F1 ATP synthase subunit gamma 2181 65.69 0 2233807..2235345 - 512 146278239 - Rsph17025_2203 - F0F1 ATP synthase subunit alpha 2182 66.49 0 2235346..2235906 - 186 146278240 - Rsph17025_2204 - ATP synthase F1, delta subunit 2183 69.46 0 2236211..2236999 - 262 146278241 - Rsph17025_2205 - hypothetical protein 2184 66.67 0 2237063..2237830 + 255 146278242 - Rsph17025_2206 - hydroxyacylglutathione hydrolase 2185 65.52 0 2237960..2240311 + 783 146278243 - Rsph17025_2207 - ATP-dependent Clp protease, ATP-binding subunit clpA 2186 70.98 0 2240425..2242002 - 525 146278244 - Rsph17025_2208 - hypothetical protein 2187 68.28 0 2242006..2243181 - 391 146278245 - Rsph17025_2209 - hypothetical protein 2188 67.76 0 2243254..2243802 - 182 146278246 - Rsph17025_2210 - ChaC family protein 2189 72.11 +1 2243806..2244669 - 287 146278247 - Rsph17025_2211 - extensin family protein 2190 69.02 0 2244675..2245610 - 311 146278248 - Rsph17025_2212 - cyclohexadienyl dehydrogenase 2191 67.96 0 2245610..2246695 - 361 146278249 - Rsph17025_2213 - histidinol-phosphate aminotransferase 2192 62.96 -1 2246911..2247531 - 206 146278250 rpsD Rsph17025_2214 - 30S ribosomal protein S4 2193 70.34 0 2247723..2248430 - 235 146278251 - Rsph17025_2215 - two component transcriptional regulator 2194 70.88 0 2248427..2250349 - 640 146278252 - Rsph17025_2216 - PAS/PAC sensor hybrid histidine kinase 2195 65.65 0 2250610..2252571 + 653 146278253 - Rsph17025_2217 - AMP-dependent synthetase and ligase 2196 64.36 -1 2252568..2253392 + 274 146278254 - Rsph17025_2218 - ABC transporter related 2197 64.95 0 2253512..2254501 + 329 146278255 - Rsph17025_2219 - inner-membrane translocator 2198 64.44 -1 2254505..2255581 + 358 146278256 - Rsph17025_2220 - inner-membrane translocator 2199 65.74 0 2255643..2256932 + 429 146278257 - Rsph17025_2221 - ABC-type branched-chain amino acid transport systems periplasmic component-like protein 2200 66.55 0 2256986..2257816 + 276 146278258 - Rsph17025_2222 - ABC transporter related 2201 70.21 0 2257831..2259045 + 404 146278259 - Rsph17025_2223 - coenzyme F390 synthetase-like protein 2202 72.58 +1 2259564..2260223 - 219 146278260 - Rsph17025_2224 - N-acetylmuramoyl-L-alanine amidase 2203 71.38 0 2260227..2261054 - 275 146278261 - Rsph17025_2225 - hypothetical protein 2204 67.89 0 2261069..2262544 - 491 146278262 gatA Rsph17025_2226 - aspartyl/glutamyl-tRNA amidotransferase subunit A 2205 67.71 0 2262541..2262828 - 95 146278263 - Rsph17025_2227 - glutamyl-tRNA(Gln) amidotransferase, C subunit 2206 70.81 0 2262860..2263510 - 216 146278264 - Rsph17025_2228 - hypothetical protein 68.34 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0