version 1.0
Rhodobacter sphaeroides ATCC 17025, complete genome - 1..3217726 3111 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 70.25 0 51..329 + 92 146276059 rpsT Rsph17025_0001 - 30S ribosomal protein S20 2 65.44 0 842..2227 + 461 146276060 dnaA Rsph17025_0002 - chromosomal replication initiation protein 3 67.02 0 2344..3462 + 372 146276061 - Rsph17025_0003 - DNA polymerase III subunit beta 4 72.62 +1 3530..4621 + 363 146276062 recF Rsph17025_0004 - recombination protein F 5 70.21 0 4618..5040 + 140 146276063 - Rsph17025_0005 - glyoxalase/bleomycin resistance protein/dioxygenase 6 67.20 0 5131..7566 + 811 146276064 gyrB Rsph17025_0006 - DNA gyrase subunit B 7 66.67 0 7669..8745 + 358 146276065 - Rsph17025_0007 - AFG1 family ATPase 8 69.41 0 8786..9661 - 291 146276066 - Rsph17025_0008 - phosphoserine phosphatase SerB 9 68.13 0 9801..10958 + 385 146276067 - Rsph17025_0009 - phosphoserine aminotransferase 10 65.04 0 11037..12632 + 531 146276068 - Rsph17025_0010 - D-3-phosphoglycerate dehydrogenase 11 68.58 0 12675..13460 + 261 146276069 - Rsph17025_0011 - metallophosphoesterase 12 72.48 +1 13543..14712 + 389 146276070 - Rsph17025_0012 - beta-ketothiolase 13 74.22 +1 14722..16746 - 674 146276071 - Rsph17025_0013 - penicillin-binding protein 1C 14 71.90 +1 16743..22169 - 1808 146276072 - Rsph17025_0014 - alpha-2-macroglobulin domain-containing protein 15 68.78 0 22282..24888 + 868 146276073 - Rsph17025_0015 - histidine kinase 16 69.90 0 24904..25677 - 257 146276074 - Rsph17025_0016 - hypothetical protein 17 71.51 0 25677..27722 - 681 146276075 - Rsph17025_0017 - ATP-dependent DNA helicase RecQ 18 59.03 -2 27780..28067 - 95 146276076 - Rsph17025_0018 - protein of unknown function YGGT 19 70.08 0 28197..28724 + 175 146276077 - Rsph17025_0019 - hypothetical protein 20 69.15 0 28792..30162 + 456 146276078 - Rsph17025_0020 - major facilitator transporter 21 70.41 0 30162..31043 + 293 146276079 mepA Rsph17025_0021 - penicillin-insensitive murein endopeptidase 22 69.57 0 31016..31909 + 297 146276080 - Rsph17025_0022 - hypothetical protein 23 68.10 0 31991..32617 + 208 146276081 - Rsph17025_0023 - hypothetical protein 24 71.83 +1 32896..33321 + 141 146276082 - Rsph17025_0024 - hypothetical protein 25 65.74 0 33334..34626 - 430 146276083 - Rsph17025_0025 - nicotinate phosphoribosyltransferase 26 69.97 0 34628..35233 - 201 146276084 - Rsph17025_0026 - nicotinamidase 27 68.97 0 35345..36211 + 288 146276085 - Rsph17025_0027 - short-chain dehydrogenase/reductase SDR 28 71.32 0 36208..37131 + 307 146276086 - Rsph17025_0028 - 2-keto-3-deoxy-galactonokinase 29 66.79 0 37089..38699 - 536 146276087 - Rsph17025_0029 - alpha amylase, catalytic region 30 67.67 0 38934..40235 + 433 146276088 - Rsph17025_0030 - major facilitator transporter 31 70.84 0 40365..41537 + 390 146276089 - Rsph17025_0031 - major facilitator transporter 32 72.27 +1 41586..42620 + 344 146276090 - Rsph17025_0032 - glycosyl transferase, group 1 33 72.09 +1 42617..43243 + 208 146276091 - Rsph17025_0033 - hypothetical protein 34 64.32 -1 43357..44379 + 340 146276092 - Rsph17025_0034 - aspartate-semialdehyde dehydrogenase 35 68.53 0 44384..44974 + 196 146276093 - Rsph17025_0035 - hypothetical protein 36 65.27 0 44991..45635 - 214 146276094 - Rsph17025_0036 - carbonate dehydratase 37 66.13 0 45785..46159 + 124 146276095 - Rsph17025_0037 - hypothetical protein 38 71.21 0 46231..47616 + 461 146276096 - Rsph17025_0038 - leucyl aminopeptidase 39 69.99 0 47616..48428 + 270 146276097 - Rsph17025_0039 - NLP/P60 protein 40 72.35 +1 48444..49658 - 404 146276098 - Rsph17025_0040 - hypothetical protein 41 67.26 0 49673..50851 - 392 146276099 - Rsph17025_0041 - radical SAM protein 42 67.23 0 50977..51507 - 176 146276100 - Rsph17025_0042 - hypothetical protein 43 70.30 0 51674..52663 + 329 146276101 - Rsph17025_0043 - L-asparaginase II 44 66.11 0 52938..53297 + 119 146276102 - Rsph17025_0044 - hypothetical protein 45 65.06 0 53314..54120 - 268 146276103 - Rsph17025_0045 - hypothetical protein 46 67.52 0 54204..55028 + 274 146276104 dapD Rsph17025_0046 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 47 67.27 0 55115..55447 + 110 146276105 - Rsph17025_0047 - hypothetical protein 48 69.20 0 55504..56646 + 380 146276106 - Rsph17025_0048 - succinyl-diaminopimelate desuccinylase 49 70.98 0 56643..57059 + 138 146276107 - Rsph17025_0049 - GCN5-related N-acetyltransferase 50 70.75 0 57105..59357 + 750 146276108 - Rsph17025_0050 - ribonuclease R 51 73.30 +1 59542..60807 + 421 146276109 - Rsph17025_0051 - lytic murein transglycosylase 52 61.41 -1 60935..62380 + 481 146276110 - Rsph17025_0052 - hypothetical protein 53 60.94 -2 62387..63346 - 319 146276111 - Rsph17025_0053 - integrase catalytic subunit 54 66.67 0 63450..63587 + 45 146276112 - Rsph17025_0054 - hypothetical protein 55 74.98 +1 63639..65249 - 536 146276113 - Rsph17025_0055 - hypothetical protein 56 67.77 0 65319..65591 - 90 146276114 - Rsph17025_0056 - hypothetical protein 57 67.34 0 65804..66544 + 246 146276115 - Rsph17025_0057 - hypothetical protein 58 63.82 -1 66633..66878 + 81 146276116 - Rsph17025_0058 - hypothetical protein 59 73.65 +1 66891..68078 + 395 146276117 - Rsph17025_0059 - 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 60 74.67 +1 68078..69076 + 332 146276118 - Rsph17025_0060 - tetraacyldisaccharide 4'-kinase 61 70.77 0 69087..70232 - 381 146276119 - Rsph17025_0061 - L-carnitine dehydratase/bile acid-inducible protein F 62 64.88 0 70229..70900 - 223 146276120 - Rsph17025_0062 - DSBA oxidoreductase 63 71.00 0 70912..71442 - 176 146276121 - Rsph17025_0063 - hypothetical protein 64 72.61 +1 71524..72633 + 369 146276122 - Rsph17025_0064 - A/G-specific adenine glycosylase 65 67.61 0 72670..73947 + 425 146276123 - Rsph17025_0065 - alkane 1-monooxygenase 66 66.22 0 74102..75220 - 372 146276124 - Rsph17025_0066 - DNA methylase N-4/N-6 domain-containing protein 67 67.29 0 75309..75947 - 212 146276125 - Rsph17025_0067 - ribonuclease H 68 74.51 +1 76173..76427 - 84 146276126 - Rsph17025_0068 - hypothetical protein 69 73.43 +1 76424..76837 - 137 146276127 - Rsph17025_0069 - ribonuclease P protein component 70 69.63 0 76859..76993 - 44 146276128 - Rsph17025_0070 - ribosomal protein L34 71 70.30 0 77243..77902 + 219 146276129 - Rsph17025_0071 - ribosomal protein S16 72 72.19 +1 77902..79314 + 470 146276130 - Rsph17025_0072 - pyridine nucleotide-disulphide oxidoreductase dimerisation region 73 69.38 0 79371..80768 + 465 146276131 - Rsph17025_0073 - integral membrane sensor signal transduction histidine kinase 74 66.59 0 80830..82218 - 462 146276132 - Rsph17025_0074 - dihydrolipoamide dehydrogenase 75 68.44 0 82782..84302 - 506 146276133 - Rsph17025_0076 - dihydrolipoamide acetyltransferase 76 65.05 0 84305..87268 - 987 146276134 kgd Rsph17025_0077 - alpha-ketoglutarate decarboxylase 77 66.89 0 87324..88208 - 294 146276135 - Rsph17025_0078 - succinyl-CoA synthetase, alpha subunit 78 64.99 0 88213..89406 - 397 146276136 sucC Rsph17025_0079 - succinyl-CoA synthetase subunit beta 79 67.29 0 89636..90598 - 320 146276137 - Rsph17025_0080 - malate dehydrogenase 80 67.07 0 90800..91537 + 245 146276138 - Rsph17025_0081 - hypothetical protein 81 67.02 0 91624..92481 + 285 146276139 - Rsph17025_0082 - citrate (pro-3S)-lyase 82 66.49 0 92490..93044 + 184 146276140 - Rsph17025_0083 - NnrU family protein 83 64.22 -1 93041..93244 + 67 146276141 - Rsph17025_0084 - hypothetical protein 84 66.86 0 93245..94276 + 343 146276142 - Rsph17025_0085 - dehydratase 85 65.62 0 94492..94875 + 127 146276143 - Rsph17025_0086 - succinate dehydrogenase, cytochrome b subunit 86 65.05 0 94887..95258 + 123 146276144 - Rsph17025_0087 - hypothetical protein 87 68.05 0 95269..97071 + 600 146276145 sdhA Rsph17025_0088 - succinate dehydrogenase flavoprotein subunit 88 73.83 +1 97071..97391 + 106 146276146 - Rsph17025_0089 - hypothetical protein 89 70.33 0 97395..97667 + 90 146276147 - Rsph17025_0090 - hypothetical protein 90 63.45 -1 97686..98462 + 258 146276148 sdhB Rsph17025_0091 - succinate dehydrogenase iron-sulfur subunit 91 65.56 0 98514..98876 - 120 146276149 - Rsph17025_0092 - hypothetical protein 92 71.58 0 98970..99620 - 216 146276150 - Rsph17025_0093 - GntR family transcriptional regulator 93 70.45 0 99653..100339 - 228 146276151 - Rsph17025_0094 - hypothetical protein 94 61.15 -2 100453..100833 + 126 146276152 - Rsph17025_0095 - hypothetical protein 95 65.00 0 101961..102260 - 99 146276153 - Rsph17025_0096 - hypothetical protein 96 73.92 +1 102650..103228 - 192 146276154 - Rsph17025_0097 - hypothetical protein 97 61.90 -1 103498..104148 + 216 146276155 - Rsph17025_0098 - hypothetical protein 98 70.83 0 104316..104771 - 151 146276156 - Rsph17025_0099 - hypothetical protein 99 72.51 +1 104749..105159 - 136 146276157 - Rsph17025_0100 - hypothetical protein 100 73.88 +1 105143..105655 - 170 146276158 - Rsph17025_0101 - hypothetical protein 68.34 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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