version 1.0
Rhodobacter sphaeroides ATCC 17025, complete genome - 1..3217726 3111 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1511 70.72 0 1567929..1568471 - 180 146277569 - Rsph17025_1529 - shikimate kinase 1512 73.79 +1 1568784..1570355 + 523 146277570 - Rsph17025_1530 - hypothetical protein 1513 70.94 0 1570355..1571290 + 311 146277571 - Rsph17025_1531 - phage integrase family protein 1514 65.31 0 1571466..1572794 + 442 146277572 - Rsph17025_1532 - hypothetical protein 1515 73.16 +1 1572764..1573903 - 379 146277573 - Rsph17025_1533 - hypothetical protein 1516 71.38 0 1574119..1574394 + 91 146277574 - Rsph17025_1534 - hypothetical protein 1517 67.84 0 1574564..1574905 - 113 146277575 - Rsph17025_1535 - hypothetical protein 1518 69.92 0 1575104..1575934 + 276 146277576 - Rsph17025_1536 - peptidase C26 1519 69.38 0 1575947..1576978 - 343 146277577 - Rsph17025_1537 - periplasmic binding protein/LacI transcriptional regulator 1520 71.48 0 1577082..1577849 - 255 146277578 - Rsph17025_1538 - enoyl-CoA hydratase/isomerase 1521 65.01 0 1577846..1578328 - 160 146277579 - Rsph17025_1539 - dehydratase 1522 70.94 0 1578325..1579119 - 264 146277580 - Rsph17025_1540 - 2-dehydro-3-deoxyglucarate aldolase 1523 71.97 +1 1579116..1580642 - 508 146277581 - Rsph17025_1541 - coenzyme A transferase 1524 66.96 0 1580672..1581685 - 337 146277582 - Rsph17025_1542 - TRAP dicarboxylate transporter- DctP subunit 1525 67.27 0 1581708..1582703 - 331 146277583 - Rsph17025_1543 - TRAP dicarboxylate transporter- DctP subunit 1526 67.13 0 1582768..1584066 - 432 146277584 - Rsph17025_1544 - TRAP dicarboxylate transporter, DctM subunit 1527 67.06 0 1584069..1584581 - 170 146277585 - Rsph17025_1545 - tripartite ATP-independent periplasmic transporter DctQ 1528 73.46 +1 1584578..1585342 - 254 146277586 - Rsph17025_1546 - enoyl-CoA hydratase/isomerase 1529 70.68 0 1585339..1587081 - 580 146277587 - Rsph17025_1547 - L-aspartate oxidase 1530 69.82 0 1587078..1588250 - 390 146277588 - Rsph17025_1548 - acyl-CoA dehydrogenase domain-containing protein 1531 69.68 0 1588371..1588868 - 165 146277589 - Rsph17025_1549 - TRAP-type mannitol/chloroaromatic compound transport system small permease component-like protein 1532 66.94 0 1588895..1589986 - 363 146277590 - Rsph17025_1550 - TRAP dicarboxylate transporter- DctP subunit 1533 66.88 0 1590246..1591169 + 307 146277591 - Rsph17025_1551 - amidohydrolase 2 1534 66.89 0 1591237..1592559 + 440 146277592 - Rsph17025_1552 - TRAP dicarboxylate transporter, DctM subunit 1535 71.53 0 1592560..1593525 - 321 146277593 - Rsph17025_1553 - hypothetical protein 1536 70.98 0 1593751..1594515 - 254 146277594 - Rsph17025_1554 - short-chain dehydrogenase/reductase SDR 1537 69.04 0 1594512..1596110 - 532 146277595 - Rsph17025_1555 - coenzyme A transferase 1538 70.17 0 1596285..1596998 + 237 146277596 - Rsph17025_1556 - GntR family transcriptional regulator 1539 65.10 0 1597158..1597667 - 169 146277597 - Rsph17025_1557 - CarD family transcriptional regulator 1540 62.83 -1 1597948..1598286 - 112 146277598 - Rsph17025_1558 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1541 72.28 +1 1598341..1598643 - 100 146277599 - Rsph17025_1559 - RNA-binding S4 domain-containing protein 1542 68.76 0 1601507..1602079 - 190 146277600 - Rsph17025_1561 - TPR repeat-containing protein 1543 64.56 -1 1602155..1602439 + 94 146277601 - Rsph17025_1562 - sterol-binding domain-containing protein 1544 71.55 0 1602436..1603398 + 320 146277602 - Rsph17025_1563 - alpha/beta hydrolase fold 1545 65.01 0 1603379..1604104 - 241 146277603 - Rsph17025_1564 - 20S proteasome, A and B subunits 1546 72.49 +1 1604137..1604943 - 268 146277604 - Rsph17025_1565 - transglutaminase domain-containing protein 1547 64.77 -1 1604972..1605922 - 316 146277605 - Rsph17025_1566 - hypothetical protein 1548 66.88 0 1605930..1607348 - 472 146277606 - Rsph17025_1567 - hypothetical protein 1549 72.42 +1 1607520..1608596 + 358 146277607 - Rsph17025_1568 - exonuclease of the beta-lactamase fold involved in RNA processing-like protein 1550 70.61 0 1608593..1610191 + 532 146277608 - Rsph17025_1569 - ATP-dependent DNA ligase 1551 66.28 0 1610323..1612143 + 606 146277609 - Rsph17025_1570 - pepF/M3 family oligoendopeptidase 1552 70.04 0 1612231..1613031 + 266 146277610 - Rsph17025_1571 - methyltransferase type 12 1553 64.88 0 1613162..1614058 - 298 146277611 - Rsph17025_1572 - RNA polymerase factor sigma-32 1554 70.67 0 1614221..1615270 - 349 146277612 - Rsph17025_1573 - RluA family pseudouridine synthase 1555 66.98 0 1615269..1615589 + 106 146277613 - Rsph17025_1574 - hypothetical protein 1556 69.43 0 1615641..1617374 + 577 146277614 - Rsph17025_1575 - integral membrane sensor hybrid histidine kinase 1557 78.68 +2 1617399..1617839 - 146 146277615 - Rsph17025_1576 - hypothetical protein 1558 67.94 0 1617927..1618946 + 339 146277616 moaA Rsph17025_1577 - molybdenum cofactor biosynthesis protein A 1559 71.73 0 1618950..1620293 - 447 146277617 - Rsph17025_1578 - FAD dependent oxidoreductase 1560 71.22 0 1620293..1621456 - 387 146277618 - Rsph17025_1579 - acetylornithine deacetylase 1561 68.30 0 1621621..1622904 - 427 146277619 - Rsph17025_1580 - hypothetical protein 1562 66.80 0 1623094..1624542 - 482 146277620 - Rsph17025_1581 - NAD(P)(+) transhydrogenase (AB-specific) 1563 67.30 0 1624553..1626124 - 523 146277621 pntA Rsph17025_1582 - NAD(P) transhydrogenase subunit alpha 1564 70.72 0 1626261..1626704 - 147 146277622 - Rsph17025_1583 - S-isoprenylcysteine methyltransferase-like protein 1565 72.07 +1 1626811..1628013 + 400 146277623 - Rsph17025_1584 - kynureninase 1566 71.50 0 1628291..1629325 + 344 146277624 - Rsph17025_1585 - ErfK/YbiS/YcfS/YnhG family protein 1567 71.00 0 1629417..1630409 + 330 146277625 - Rsph17025_1586 - alcohol dehydrogenase 1568 63.33 -1 1630474..1630833 - 119 146277626 - Rsph17025_1587 - PRC-barrel domain-containing protein 1569 70.24 0 1630923..1631174 - 83 146277627 - Rsph17025_1588 - hypothetical protein 1570 70.34 0 1631250..1631984 - 244 146277628 - Rsph17025_1589 - peptidase M48, Ste24p 1571 65.42 0 1632125..1632364 + 79 146277629 - Rsph17025_1590 - hypothetical protein 1572 68.69 0 1632396..1632989 - 197 146277630 - Rsph17025_1591 - flavodoxin/nitric oxide synthase 1573 75.24 +1 1633132..1634076 + 314 146277631 - Rsph17025_1592 - ribokinase-like domain-containing protein 1574 69.61 0 1634281..1635945 - 554 146277632 nadE Rsph17025_1593 - NAD synthetase 1575 69.46 0 1636127..1637629 + 500 146277633 - Rsph17025_1594 - MORN repeat-containing protein 1576 67.64 0 1637846..1638970 + 374 146277634 - Rsph17025_1595 - nitrite reductase, copper-containing 1577 71.58 0 1639121..1639975 + 284 146277635 - Rsph17025_1596 - hypothetical protein 1578 66.46 0 1640035..1640526 - 163 146277636 - Rsph17025_1597 - pseudoazurin 1579 65.79 0 1640926..1642515 + 529 146277637 - Rsph17025_1598 - 2-isopropylmalate synthase 1580 67.29 0 1642573..1643529 - 318 146277638 - Rsph17025_1599 - hypothetical protein 1581 67.34 0 1643852..1644889 + 345 146277639 - Rsph17025_1600 - cell shape determining protein MreB 1582 69.73 0 1644920..1645834 + 304 146277640 - Rsph17025_1601 - rod shape-determining protein MreC 1583 69.26 0 1645827..1646366 + 179 146277641 - Rsph17025_1602 - hypothetical protein 1584 68.93 0 1646363..1648309 + 648 146277642 - Rsph17025_1603 - peptidoglycan glycosyltransferase 1585 66.14 0 1648317..1649456 + 379 146277643 - Rsph17025_1604 - rod shape-determining protein RodA 1586 67.56 0 1649478..1650377 - 299 146277644 - Rsph17025_1605 - RpiR family transcriptional regulator 1587 69.64 0 1650444..1651283 + 279 146277645 - Rsph17025_1606 - N-formylglutamate amidohydrolase 1588 62.13 -1 1651287..1651793 + 168 146277646 - Rsph17025_1607 - tripartite ATP-independent periplasmic transporter DctQ 1589 64.18 -1 1651793..1653118 + 441 146277647 - Rsph17025_1608 - TRAP C4-dicarboxylate transport system permease DctM subunit 1590 65.03 0 1653176..1654213 + 345 146277648 - Rsph17025_1609 - TRAP dicarboxylate transporter- DctP subunit 1591 63.91 -1 1654273..1655652 + 459 146277649 - Rsph17025_1610 - glutamate--ammonia ligase 1592 68.68 0 1655666..1657054 + 462 146277650 - Rsph17025_1611 - aldehyde dehydrogenase 1593 66.49 0 1657051..1658196 + 381 146277651 - Rsph17025_1612 - iron-containing alcohol dehydrogenase 1594 72.45 +1 1658214..1659458 + 414 146277652 - Rsph17025_1613 - FAD dependent oxidoreductase 1595 67.95 0 1659464..1659775 - 103 146277653 - Rsph17025_1614 - hypothetical protein 1596 70.09 0 1659863..1660681 - 272 146277654 - Rsph17025_1615 - 2,5-didehydrogluconate reductase 1597 66.81 0 1660752..1661471 - 239 146277655 - Rsph17025_1616 - RNA polymerase, sigma 28 subunit, FliA/WhiG 1598 75.59 +2 1661468..1662487 - 339 146277656 - Rsph17025_1617 - hypothetical protein 1599 70.41 0 1662491..1664599 - 702 146277657 - Rsph17025_1618 - flagellar biosynthesis protein FlhA 1600 72.59 +1 1665004..1665324 + 106 146277658 - Rsph17025_1619 - hypothetical protein 1601 74.37 +1 1665405..1666403 + 332 146277659 - Rsph17025_1620 - hypothetical protein 1602 75.37 +2 1666400..1667077 + 225 146277660 - Rsph17025_1621 - flagellar basal body P-ring biosynthesis protein-like protein 1603 63.67 -1 1667114..1667413 + 99 146277661 - Rsph17025_1622 - hypothetical protein 1604 71.69 0 1667442..1667819 + 125 146277662 - Rsph17025_1623 - hypothetical protein 1605 75.36 +2 1667911..1668531 - 206 146277663 - Rsph17025_1624 - Sel1 domain-containing protein 1606 69.44 0 1668528..1668923 - 131 146277664 - Rsph17025_1625 - hypothetical protein 1607 71.43 0 1669104..1669607 + 167 146277665 - Rsph17025_1626 - hypothetical protein 1608 75.56 +2 1669915..1670229 - 104 146277666 - Rsph17025_1627 - hypothetical protein 1609 67.95 0 1670253..1670642 - 129 146277667 - Rsph17025_1628 - flagellin-specific chaperone FliS-like protein 1610 74.87 +1 1670757..1671353 - 198 146277668 - Rsph17025_1629 - hypothetical protein 68.34 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0