version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 940 67.56 0 976154..978163 - 669 77462905 - RSP_2351 - hypothetical protein 941 68.62 0 978176..979708 - 510 77462906 - RSP_2352 - putative terminase large subunit / phage terminase 942 71.97 0 979786..980181 - 131 77462907 - RSP_2353 - hypothetical protein 943 71.11 0 980178..980492 - 104 77462908 - RSP_6046 - hypothetical protein 944 68.82 0 980495..980911 - 138 77462909 - RSP_6047 - hypothetical protein 945 71.87 0 980904..981326 - 140 77462910 - RSP_2354 - hypothetical protein 946 48.34 -2 981816..983288 + 490 77462911 - RSP_2356 - hypothetical protein 947 66.38 0 983273..983623 - 116 77462912 - RSP_2355 - HNH nuclease / phage phi-105 holin-like protein 948 69.51 0 983626..984222 - 198 77462913 - RSP_2357 - hypothetical protein 949 66.83 0 984222..985484 - 420 77462914 - RSP_2358 - phage phi-C31 gp36-like protein /HK97 family major capsid protein 950 68.85 0 985754..986074 - 106 77462915 - RSP_2359 - hypothetical protein 951 68.59 0 986071..987264 - 397 77462916 - RSP_2360 - head HK97 family portal protein 952 62.60 -1 987339..989156 - 605 77462917 - RSP_2361 - putative integrase/resolvase recombinase protein phage-related integrase 953 66.79 0 989506..990288 + 260 77462918 - RSP_2362 - GntR family transcriptional regulator 954 71.11 0 990482..991246 + 254 77462919 - RSP_2363 - Short-chain dehydrogenase/reductase 955 65.91 0 991251..991907 + 218 77462920 fucA RSP_2364 - L-fuculose phosphate aldolase (class II) 956 65.32 0 991973..992935 + 320 77462921 - RSP_2365 - ABC sugar (ribose) transporter, periplasmic substrate-binding subunit 957 69.45 0 993119..994627 + 502 77462922 - RSP_2366 - ABC sugar (ribose) transporter, fused ATPase subunits 958 70.15 0 994634..995638 + 334 77462923 - RSP_2368 - ABC sugar (ribose) transporter, inner membrane subunit 959 68.92 0 995642..996619 + 325 77462924 - RSP_2367 - ABC sugar (ribose) transporter, inner membrane subunit 960 69.72 0 996635..997585 + 316 77462925 - RSP_2370 - putative sugar kinase 961 70.28 0 997596..998342 + 248 77462926 - RSP_2371 - 3-oxoacyl-(acyl-carrier protein) reductase / Short-chain dehydrogenase/reductase SDR 962 71.04 0 998596..1000014 + 472 77462927 - RSP_2372 - aldehyde dehydrogenase (NAD-dependent) 963 74.53 +1 1000011..1001180 + 389 77462928 - RSP_2373 - MFS family transporter 964 71.62 0 1001413..1001937 + 174 77462929 - RSP_2374 - hypothetical protein 965 71.92 0 1002024..1003469 + 481 77462930 - RSP_2375 - hypothetical protein 966 69.77 0 1003514..1004704 + 396 77462931 kbl RSP_2376 - 2-amino-3-ketobutyrate coenzyme A ligase 967 67.74 0 1004704..1005729 + 341 77462932 tdh RSP_2377 - L-threonine 3-dehydrogenase 968 70.22 0 1005921..1007243 - 440 77462933 cypC RSP_2378 - putative fatty acid beta hydroxylase (cytochrome P450) 969 70.59 0 1007354..1007608 - 84 77462934 - RSP_2379 - hypothetical protein 970 66.20 0 1007644..1009776 - 710 77462935 catC RSP_2380 - catalase 971 68.56 0 1009898..1010425 - 175 77462936 - RSP_6048 - hypothetical protein 972 72.25 0 1010544..1011098 + 184 77462937 - RSP_2381 - 3-methyladenine DNA glycosylase 973 67.90 0 1011171..1011332 + 53 77462938 - RSP_6049 - hypothetical protein 974 70.00 0 1011405..1012514 - 369 77462939 - RSP_2382 - hypothetical protein 975 69.65 0 1012514..1012915 - 133 77462940 - RSP_2383 - putative integral membrane protein 976 72.61 0 1012902..1013726 - 274 77462941 - RSP_6050 - hypothetical protein 977 64.17 -1 1013866..1014426 + 186 77462942 - RSP_2384 - hypothetical protein 978 68.60 0 1014506..1014868 - 120 77462943 - RSP_2385 - hypothetical protein 979 64.30 -1 1015271..1015651 + 126 77462944 - RSP_6224 - hypothetical protein 980 70.68 0 1015654..1016748 - 364 77462945 mtnA RSP_2386 - methylthioribose-1-phosphate isomerase 981 69.66 0 1016860..1017294 - 144 77462946 - RSP_2387 - hypothetical protein 982 69.86 0 1017366..1017866 - 166 77462947 - RSP_2388 - hypothetical protein 983 69.11 0 1018151..1018681 + 176 77462948 - RSP_2389 - putative glutathione peroxidase 984 74.41 +1 1018710..1019819 + 369 77462949 acuC1 RSP_2390 - putative acetoin utilization protein 985 74.41 +1 1019816..1020370 + 184 77462950 - RSP_2391 - 2'-5' RNA ligase 986 65.41 0 1020381..1020938 - 185 77462951 - RSP_2392 - putative membrane protein, periplasmic nitrate reductase NnuR 987 75.00 +1 1021231..1022454 - 407 77462952 kdtA RSP_2394 - putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) 988 68.77 0 1022619..1023662 + 347 77462953 - RSP_2395 - BCCP, cytochrome c peroxidase 989 70.06 0 1023737..1024738 - 333 77462954 - RSP_2396 - hypothetical protein 990 65.10 0 1025030..1026049 - 339 77462955 - RSP_2397 - ABC putrescine transporter, periplasmic substrate-binding subunit 991 66.54 0 1026077..1026877 - 266 77462956 - RSP_2398 - ABC putrescine transporter, inner membrane subunit 992 65.77 0 1026870..1027763 - 297 77462957 - RSP_2399 - ABC putrescine transporter, inner membrane subunit 993 72.44 0 1027765..1028769 - 334 77462958 - RSP_2400 - ABC putrescine transporter, ATPase subunit 994 74.07 +1 1028860..1030317 - 485 77462959 - RSP_2401 - putative 6-aminohexanoate-cyclic-dimer hydrolase 995 69.50 0 1030777..1032612 + 611 77462960 - RSP_2402 - putative TonB dependent vitamin B12 outer membrane receptor 996 71.54 0 1032599..1033459 + 286 77462961 - RSP_2403 - ABC cobalamin/Fe3+-siderophore transporter, periplasmic substrate-binding subunit 997 72.12 0 1033456..1034445 + 329 77462962 - RSP_2404 - ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit 998 74.10 +1 1034442..1035194 + 250 77462963 - RSP_2405 - ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit 999 75.76 +1 1035191..1035850 + 219 77462964 - RSP_2406 - hypothetical protein 1000 71.51 0 1035995..1037728 - 577 77462965 - RSP_2407 - periplasmic sensor hybrid histidine kinase 1001 70.73 0 1037772..1038017 - 81 77462966 - RSP_2408 - hypothetical protein 1002 71.33 0 1038091..1039140 + 349 77462967 rluD RSP_2409 - ribosomal large subunit pseudouridine synthase D 1003 66.11 0 1039301..1040197 + 298 77462968 rpoH1 RSP_2410 - RNA polymerase factor sigma-32 1004 70.79 0 1040755..1041555 - 266 77462969 - RSP_2411 - hypothetical protein 1005 66.06 0 1041640..1043460 - 606 77462970 pepF RSP_2412 - oligoendopeptidase F 1006 70.35 0 1043632..1045233 - 533 77462971 lig2 RSP_2413 - ATP-dependent DNA ligase 1007 71.88 0 1045230..1046381 - 383 77462972 - RSP_2414 - hypothetical protein 1008 66.24 0 1046578..1047969 + 463 77462973 - RSP_2415 - hypothetical protein 1009 65.93 0 1047977..1048927 + 316 77462974 - RSP_2416 - hypothetical protein 1010 72.47 0 1048924..1049733 + 269 77462975 - RSP_2417 - hypothetical protein 1011 65.15 0 1049765..1050490 + 241 77462976 - RSP_2420 - hypothetical protein 1012 72.85 0 1050480..1051433 - 317 77462977 pldB RSP_2418 - putative esterase/lipase/thioesterase 1013 65.61 0 1051430..1051714 - 94 77462978 - RSP_2419 - hypothetical protein 1014 68.24 0 1051790..1052362 + 190 77462979 - RSP_2421 - hypothetical protein 1015 69.96 0 1052447..1055239 + 930 77462980 mgpS RSP_2422 - putative ATP-dependent helicase, MgpS 1016 71.04 0 1055245..1055541 + 98 77462981 - RSP_2423 - putative heat shock protein 15 (HSP15) 1017 62.24 -1 1055596..1055934 + 112 77462982 - RSP_2424 - ferredoxin II 1018 65.69 0 1056214..1056723 + 169 77462983 - RSP_2425 - CarD family transcriptional regulator 1019 77.87 +2 1056911..1057660 - 249 77462984 cobV RSP_2427 - cobalamin-5'-phosphate synthase 1020 73.25 +1 1057742..1058758 + 338 77462985 cobT RSP_2428 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 1021 69.67 0 1058814..1060742 - 642 77462986 - RSP_2429 - glutathione-regulated potassium-efflux system protein, kefB 1022 73.83 +1 1060857..1063733 - 958 77462987 - RSP_6052 - hypothetical protein 1023 69.25 0 1063855..1064589 + 244 77462988 - RSP_2430 - hypothetical protein 1024 66.74 0 1064635..1065927 - 430 77462989 - RSP_2431 - putative O-acetylhomoserine sulfhydrylase 1025 65.52 0 1066170..1066517 - 115 77462990 - RSP_2432 - hypothetical protein 1026 57.11 -2 1066514..1066900 - 128 77462991 cheY2 RSP_2433 - chemotaxis response regulator, CheY2 1027 62.31 -1 1066878..1067795 - 305 77462992 cheR1 RSP_2434 - putative MCP methyltransferase, CheR1 1028 61.44 -1 1067792..1068250 - 152 77462993 cheW1 RSP_2435 - putative chemotaxis scaffold protein, CheW1 1029 63.85 -1 1068252..1070312 - 686 77462994 cheA1 RSP_2436 - chemotaxis histidine protein kinase, CheA1 1030 63.41 -1 1070320..1070688 - 122 77462995 cheY1 RSP_2437 - chemotaxis response regulator, CheY1 1031 62.46 -1 1070679..1070963 - 94 77462996 cheX RSP_2438 - putative CheX protein 1032 61.17 -1 1070960..1071559 - 199 77462997 cheD RSP_2439 - chemoreceptor glutamine deamidase CheD 1033 64.16 -1 1071682..1073994 - 770 77462998 mcpA RSP_2440 - methyl accepting chemotaxis protein 1034 67.17 0 1074101..1075888 - 595 77462999 tlpS RSP_2441 - methyl-accepting chemotaxis sensory transducer 1035 68.09 0 1075992..1077674 - 560 77463000 mcpB RSP_2442 - methyl accepting chemotaxis protein, McpB 1036 65.31 0 1077763..1078131 - 122 77463001 cheY5 RSP_2443 - putative chemotaxis response regulator, CheY5 1037 74.85 +1 1078128..1078457 - 109 77463002 - RSP_2444 - hypothetical protein 1038 64.90 0 1078538..1080742 + 734 77463003 - RSP_2445 - putative Alpha amylase 1039 67.82 0 1080739..1084047 + 1102 77463004 - RSP_2446 - putative trehalose synthase 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0