version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 911 66.14 0 948123..949262 - 379 77462876 rodA RSP_2325 - RodA, rod cell shape determining protein 912 69.18 0 949270..951216 - 648 77462877 pbpA RSP_2326 - peptidoglycan glycosyltransferase 913 71.30 0 951213..951752 - 179 77462878 - RSP_2327 - hypothetical protein 914 69.44 0 951745..952647 - 300 77462879 mreC RSP_2328 - rod shape-determining protein MreC 915 67.63 0 952681..953718 - 345 77462880 mreB RSP_2329 - rod shape-determining protein MreB 916 66.98 0 954067..955023 + 318 77462881 - RSP_6044 - Serine/alanine racemase VanTc3 917 66.23 0 955210..956799 - 529 77462882 leuA RSP_2330 - 2-isopropylmalate synthase 918 67.76 0 957264..957722 + 152 77462883 ppaZ RSP_2331 - PpaZ, a novel pseudoazurin precursor (blue copper protein) 919 69.85 0 958220..959725 - 501 77462884 - RSP_2332 - hypothetical protein 920 69.73 0 959907..961571 + 554 77462885 nadE RSP_2333 - NAD synthetase 921 75.66 +1 961677..962621 - 314 77462886 pfkB RSP_2334 - 6-phosphofructokinase 922 69.36 0 962768..963361 + 197 77462887 wrbA RSP_2335 - trp repressor binding protein WrbA, putative 923 65.42 0 963386..963625 - 79 77462888 - RSP_6045 - hypothetical protein 924 70.63 0 963757..964488 + 243 77462889 - RSP_2336 - hypothetical protein 925 71.43 0 964563..964814 + 83 77462890 - RSP_2337 - hypothetical protein 926 66.12 0 964900..965262 + 120 77462891 - RSP_2338 - hypothetical protein 927 63.56 -1 965250..965828 - 192 77462892 - RSP_2339 - hypothetical protein 928 68.34 0 965892..967202 - 436 77462893 - RSP_2340 - MiaB-like radical SAM protein 929 71.84 0 967364..968542 - 392 77462894 - RSP_2341 - hypothetical protein 930 66.47 0 968571..969074 - 167 77462895 gpt RSP_2342 - xanthine-guanine phosphoribosyltransferase 931 68.62 0 969084..969698 - 204 77462896 - RSP_2343 - RhtB family threonine efflux protein 932 65.09 0 969700..970524 - 274 77462897 fabI1 RSP_2344 - enoyl-(acyl carrier protein) reductase 933 68.82 0 970667..971269 + 200 77462898 pdxH RSP_2345 - pyridoxamine 5'-phosphate oxidase 934 64.64 0 971386..971928 + 180 77462899 - RSP_2346 - cold-shock DNA-binding protein family protein 935 71.00 0 971943..972404 + 153 77462900 - RSP_2347 - hypothetical protein 936 61.89 -1 973054..973848 - 264 77462901 - RSP_2348 - hypothetical protein 937 68.52 0 973975..974136 - 53 77462902 - RSP_6223 - hypothetical protein 938 64.77 0 974266..974898 - 210 77462903 - RSP_2349 - hypothetical protein 939 69.03 0 974973..975437 - 154 77462904 - RSP_2350 - hypothetical protein 940 67.56 0 976154..978163 - 669 77462905 - RSP_2351 - hypothetical protein 941 68.62 0 978176..979708 - 510 77462906 - RSP_2352 - putative terminase large subunit / phage terminase 942 71.97 0 979786..980181 - 131 77462907 - RSP_2353 - hypothetical protein 943 71.11 0 980178..980492 - 104 77462908 - RSP_6046 - hypothetical protein 944 68.82 0 980495..980911 - 138 77462909 - RSP_6047 - hypothetical protein 945 71.87 0 980904..981326 - 140 77462910 - RSP_2354 - hypothetical protein 946 48.34 -2 981816..983288 + 490 77462911 - RSP_2356 - hypothetical protein 947 66.38 0 983273..983623 - 116 77462912 - RSP_2355 - HNH nuclease / phage phi-105 holin-like protein 948 69.51 0 983626..984222 - 198 77462913 - RSP_2357 - hypothetical protein 949 66.83 0 984222..985484 - 420 77462914 - RSP_2358 - phage phi-C31 gp36-like protein /HK97 family major capsid protein 950 68.85 0 985754..986074 - 106 77462915 - RSP_2359 - hypothetical protein 951 68.59 0 986071..987264 - 397 77462916 - RSP_2360 - head HK97 family portal protein 952 62.60 -1 987339..989156 - 605 77462917 - RSP_2361 - putative integrase/resolvase recombinase protein phage-related integrase 953 66.79 0 989506..990288 + 260 77462918 - RSP_2362 - GntR family transcriptional regulator 954 71.11 0 990482..991246 + 254 77462919 - RSP_2363 - Short-chain dehydrogenase/reductase 955 65.91 0 991251..991907 + 218 77462920 fucA RSP_2364 - L-fuculose phosphate aldolase (class II) 956 65.32 0 991973..992935 + 320 77462921 - RSP_2365 - ABC sugar (ribose) transporter, periplasmic substrate-binding subunit 957 69.45 0 993119..994627 + 502 77462922 - RSP_2366 - ABC sugar (ribose) transporter, fused ATPase subunits 958 70.15 0 994634..995638 + 334 77462923 - RSP_2368 - ABC sugar (ribose) transporter, inner membrane subunit 959 68.92 0 995642..996619 + 325 77462924 - RSP_2367 - ABC sugar (ribose) transporter, inner membrane subunit 960 69.72 0 996635..997585 + 316 77462925 - RSP_2370 - putative sugar kinase 961 70.28 0 997596..998342 + 248 77462926 - RSP_2371 - 3-oxoacyl-(acyl-carrier protein) reductase / Short-chain dehydrogenase/reductase SDR 962 71.04 0 998596..1000014 + 472 77462927 - RSP_2372 - aldehyde dehydrogenase (NAD-dependent) 963 74.53 +1 1000011..1001180 + 389 77462928 - RSP_2373 - MFS family transporter 964 71.62 0 1001413..1001937 + 174 77462929 - RSP_2374 - hypothetical protein 965 71.92 0 1002024..1003469 + 481 77462930 - RSP_2375 - hypothetical protein 966 69.77 0 1003514..1004704 + 396 77462931 kbl RSP_2376 - 2-amino-3-ketobutyrate coenzyme A ligase 967 67.74 0 1004704..1005729 + 341 77462932 tdh RSP_2377 - L-threonine 3-dehydrogenase 968 70.22 0 1005921..1007243 - 440 77462933 cypC RSP_2378 - putative fatty acid beta hydroxylase (cytochrome P450) 969 70.59 0 1007354..1007608 - 84 77462934 - RSP_2379 - hypothetical protein 970 66.20 0 1007644..1009776 - 710 77462935 catC RSP_2380 - catalase 971 68.56 0 1009898..1010425 - 175 77462936 - RSP_6048 - hypothetical protein 972 72.25 0 1010544..1011098 + 184 77462937 - RSP_2381 - 3-methyladenine DNA glycosylase 973 67.90 0 1011171..1011332 + 53 77462938 - RSP_6049 - hypothetical protein 974 70.00 0 1011405..1012514 - 369 77462939 - RSP_2382 - hypothetical protein 975 69.65 0 1012514..1012915 - 133 77462940 - RSP_2383 - putative integral membrane protein 976 72.61 0 1012902..1013726 - 274 77462941 - RSP_6050 - hypothetical protein 977 64.17 -1 1013866..1014426 + 186 77462942 - RSP_2384 - hypothetical protein 978 68.60 0 1014506..1014868 - 120 77462943 - RSP_2385 - hypothetical protein 979 64.30 -1 1015271..1015651 + 126 77462944 - RSP_6224 - hypothetical protein 980 70.68 0 1015654..1016748 - 364 77462945 mtnA RSP_2386 - methylthioribose-1-phosphate isomerase 981 69.66 0 1016860..1017294 - 144 77462946 - RSP_2387 - hypothetical protein 982 69.86 0 1017366..1017866 - 166 77462947 - RSP_2388 - hypothetical protein 983 69.11 0 1018151..1018681 + 176 77462948 - RSP_2389 - putative glutathione peroxidase 984 74.41 +1 1018710..1019819 + 369 77462949 acuC1 RSP_2390 - putative acetoin utilization protein 985 74.41 +1 1019816..1020370 + 184 77462950 - RSP_2391 - 2'-5' RNA ligase 986 65.41 0 1020381..1020938 - 185 77462951 - RSP_2392 - putative membrane protein, periplasmic nitrate reductase NnuR 987 75.00 +1 1021231..1022454 - 407 77462952 kdtA RSP_2394 - putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) 988 68.77 0 1022619..1023662 + 347 77462953 - RSP_2395 - BCCP, cytochrome c peroxidase 989 70.06 0 1023737..1024738 - 333 77462954 - RSP_2396 - hypothetical protein 990 65.10 0 1025030..1026049 - 339 77462955 - RSP_2397 - ABC putrescine transporter, periplasmic substrate-binding subunit 991 66.54 0 1026077..1026877 - 266 77462956 - RSP_2398 - ABC putrescine transporter, inner membrane subunit 992 65.77 0 1026870..1027763 - 297 77462957 - RSP_2399 - ABC putrescine transporter, inner membrane subunit 993 72.44 0 1027765..1028769 - 334 77462958 - RSP_2400 - ABC putrescine transporter, ATPase subunit 994 74.07 +1 1028860..1030317 - 485 77462959 - RSP_2401 - putative 6-aminohexanoate-cyclic-dimer hydrolase 995 69.50 0 1030777..1032612 + 611 77462960 - RSP_2402 - putative TonB dependent vitamin B12 outer membrane receptor 996 71.54 0 1032599..1033459 + 286 77462961 - RSP_2403 - ABC cobalamin/Fe3+-siderophore transporter, periplasmic substrate-binding subunit 997 72.12 0 1033456..1034445 + 329 77462962 - RSP_2404 - ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit 998 74.10 +1 1034442..1035194 + 250 77462963 - RSP_2405 - ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit 999 75.76 +1 1035191..1035850 + 219 77462964 - RSP_2406 - hypothetical protein 1000 71.51 0 1035995..1037728 - 577 77462965 - RSP_2407 - periplasmic sensor hybrid histidine kinase 1001 70.73 0 1037772..1038017 - 81 77462966 - RSP_2408 - hypothetical protein 1002 71.33 0 1038091..1039140 + 349 77462967 rluD RSP_2409 - ribosomal large subunit pseudouridine synthase D 1003 66.11 0 1039301..1040197 + 298 77462968 rpoH1 RSP_2410 - RNA polymerase factor sigma-32 1004 70.79 0 1040755..1041555 - 266 77462969 - RSP_2411 - hypothetical protein 1005 66.06 0 1041640..1043460 - 606 77462970 pepF RSP_2412 - oligoendopeptidase F 1006 70.35 0 1043632..1045233 - 533 77462971 lig2 RSP_2413 - ATP-dependent DNA ligase 1007 71.88 0 1045230..1046381 - 383 77462972 - RSP_2414 - hypothetical protein 1008 66.24 0 1046578..1047969 + 463 77462973 - RSP_2415 - hypothetical protein 1009 65.93 0 1047977..1048927 + 316 77462974 - RSP_2416 - hypothetical protein 1010 72.47 0 1048924..1049733 + 269 77462975 - RSP_2417 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0