version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 859 73.96 +1 890052..890723 + 223 77462824 ampD RSP_2272 - N-acetylmuramoyl-L-alanine amidase 860 70.56 0 891211..892443 - 410 77462825 - RSP_2273 - putative anaerobic phenylacetate CoA ligase 861 66.06 0 892440..893270 - 276 77462826 - RSP_2274 - branched chain amino acid ABC transporter ATPase 862 66.98 0 893357..894646 - 429 77462827 - RSP_2275 - branched chain amino acid ABC transporter periplasmic substrate-binding protein 863 64.90 0 894707..895783 - 358 77462828 - RSP_2276 - branched chain amino acid ABC transporter inner membrane protein 864 65.86 0 895787..896776 - 329 77462829 - RSP_2277 - branched chain amino acid ABC transporter inner membrane protein 865 64.40 -1 896911..897750 - 279 77462830 - RSP_2278 - branched chain amino acid ABC transporter ATPase 866 66.16 0 898039..900000 - 653 77462831 - RSP_2279 - long chain acyl-CoA synthetase 867 72.33 0 900561..902483 + 640 77462832 - RSP_2280 - PAS sensor hybrid histidine kinase 868 70.76 0 902480..903187 + 235 77462833 - RSP_2281 - two-component transcriptional regulator 869 75.57 +1 903198..904376 - 392 77462834 chrA RSP_2282 - chromate efflux pump, ChrA 870 63.77 -1 904801..905421 + 206 77462835 rpsD RSP_2283 - 30S ribosomal protein S4 871 68.23 0 905665..906750 + 361 77462836 - RSP_2284 - histidinol-phosphate aminotransferase 872 69.12 0 906750..907685 + 311 77462837 - RSP_6215 - cyclohexadienyl dehydrogenase 873 72.49 0 907691..908548 + 285 77462838 - RSP_2285 - hypothetical protein 874 72.59 0 908551..909546 - 331 77462839 - RSP_2286 - hypothetical protein 875 68.12 0 909607..910155 + 182 77462840 - RSP_2287 - ChaC-like protein 876 69.13 0 910229..911404 + 391 77462841 - RSP_2288 - hypothetical protein 877 71.55 0 911408..912985 + 525 77462842 - RSP_2289 - hypothetical protein 878 70.46 0 913317..913817 + 166 77462843 - RSP_2291 - hypothetical protein 879 65.67 0 914730..917045 - 771 77462844 clpA RSP_2293 - chaperonin clpA/B 880 66.80 0 917212..917979 - 255 77462845 gloB RSP_2294 - putative hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein 881 70.22 0 918041..918829 + 262 77462846 - RSP_2295 - hypothetical protein 882 66.67 0 919132..919692 + 186 77462847 atpH RSP_2296 - ATPase, delta (OSCP) subunit 883 66.15 0 919693..921231 + 512 77462848 atpA RSP_2297 - F0F1 ATP synthase subunit alpha 884 66.67 0 921254..922123 + 289 77462849 atpG RSP_2298 - F0F1 ATP synthase subunit gamma 885 66.25 0 922141..923568 + 475 77462850 atpD RSP_2299 - F0F1 ATP synthase subunit beta 886 69.92 0 923578..923976 + 132 77462851 atpC RSP_2300 - F0F1 ATP synthase subunit epsilon 887 64.12 -1 924402..925421 - 339 77462852 prsA RSP_2301 - phosphoribosyl pyrophosphate synthetase 888 73.10 +1 925553..926578 - 341 77462853 - RSP_2302 - L-threonine aldolase 889 65.58 0 926578..927039 - 153 77462854 - RSP_2303 - hypothetical protein 890 70.36 0 927079..927999 - 306 77462855 ribF RSP_2304 - FMN adenylyltransferase / riboflavin kinase 891 65.77 0 928027..928470 - 147 77462856 - RSP_2305 - MaoC family protein 892 68.34 0 928696..929589 - 297 77462857 - RSP_2306 - putative HAD superfamily protein 893 65.36 0 929740..930657 - 305 77462858 - RSP_2307 - putative manganese-dependent inorganic pyrophosphatase 894 71.03 0 930778..931029 + 83 77462859 - RSP_2308 - hypothetical protein 895 70.74 0 931046..932101 - 351 77462860 - RSP_2309 - hypothetical protein 896 61.81 -1 932218..932505 + 95 77462861 groES RSP_2310 - co-chaperonin GroES 897 65.02 0 932601..934244 + 547 77462862 groEL RSP_2311 - chaperonin GroEL 898 72.92 0 934513..935088 - 191 77462863 - RSP_2312 - hypothetical protein 899 69.00 0 935222..936208 + 328 77462864 - RSP_2313 - 2-hydroxyacid dehydrogenase 900 70.33 0 936536..937354 + 272 77462865 - RSP_2314 - oxidoreductase, chromogranin/secretogranin 901 66.67 0 937445..937750 + 101 77462866 - RSP_2315 - hypothetical protein 902 72.14 0 937932..939173 - 413 77462867 dadA RSP_2316 - D-amino acid dehydrogenase 903 67.19 0 939220..940365 - 381 77462868 - RSP_2317 - Iron-containing alcohol dehydrogenase 904 68.03 0 940362..941750 - 462 77462869 - RSP_2318 - putative aldehyde dehydrogenase 905 65.00 0 941763..943142 - 459 77462870 glnA RSP_2319 - L-glutamine synthetase 906 64.35 -1 943218..944255 - 345 77462871 - RSP_2320 - TRAP-T family transporter periplasmic binding protein 907 66.14 0 944312..945637 - 441 77462872 - RSP_2321 - TRAP-T family transporter 908 62.13 -1 945637..946143 - 168 77462873 - RSP_2322 - TRAP dicarboxylate family transporter DctQ subunit 909 69.54 0 946148..946912 - 254 77462874 - RSP_2323 - hypothetical protein 910 67.59 0 947087..947953 + 288 77462875 - RSP_2324 - RpiR family transcriptional regulator 911 66.14 0 948123..949262 - 379 77462876 rodA RSP_2325 - RodA, rod cell shape determining protein 912 69.18 0 949270..951216 - 648 77462877 pbpA RSP_2326 - peptidoglycan glycosyltransferase 913 71.30 0 951213..951752 - 179 77462878 - RSP_2327 - hypothetical protein 914 69.44 0 951745..952647 - 300 77462879 mreC RSP_2328 - rod shape-determining protein MreC 915 67.63 0 952681..953718 - 345 77462880 mreB RSP_2329 - rod shape-determining protein MreB 916 66.98 0 954067..955023 + 318 77462881 - RSP_6044 - Serine/alanine racemase VanTc3 917 66.23 0 955210..956799 - 529 77462882 leuA RSP_2330 - 2-isopropylmalate synthase 918 67.76 0 957264..957722 + 152 77462883 ppaZ RSP_2331 - PpaZ, a novel pseudoazurin precursor (blue copper protein) 919 69.85 0 958220..959725 - 501 77462884 - RSP_2332 - hypothetical protein 920 69.73 0 959907..961571 + 554 77462885 nadE RSP_2333 - NAD synthetase 921 75.66 +1 961677..962621 - 314 77462886 pfkB RSP_2334 - 6-phosphofructokinase 922 69.36 0 962768..963361 + 197 77462887 wrbA RSP_2335 - trp repressor binding protein WrbA, putative 923 65.42 0 963386..963625 - 79 77462888 - RSP_6045 - hypothetical protein 924 70.63 0 963757..964488 + 243 77462889 - RSP_2336 - hypothetical protein 925 71.43 0 964563..964814 + 83 77462890 - RSP_2337 - hypothetical protein 926 66.12 0 964900..965262 + 120 77462891 - RSP_2338 - hypothetical protein 927 63.56 -1 965250..965828 - 192 77462892 - RSP_2339 - hypothetical protein 928 68.34 0 965892..967202 - 436 77462893 - RSP_2340 - MiaB-like radical SAM protein 929 71.84 0 967364..968542 - 392 77462894 - RSP_2341 - hypothetical protein 930 66.47 0 968571..969074 - 167 77462895 gpt RSP_2342 - xanthine-guanine phosphoribosyltransferase 931 68.62 0 969084..969698 - 204 77462896 - RSP_2343 - RhtB family threonine efflux protein 932 65.09 0 969700..970524 - 274 77462897 fabI1 RSP_2344 - enoyl-(acyl carrier protein) reductase 933 68.82 0 970667..971269 + 200 77462898 pdxH RSP_2345 - pyridoxamine 5'-phosphate oxidase 934 64.64 0 971386..971928 + 180 77462899 - RSP_2346 - cold-shock DNA-binding protein family protein 935 71.00 0 971943..972404 + 153 77462900 - RSP_2347 - hypothetical protein 936 61.89 -1 973054..973848 - 264 77462901 - RSP_2348 - hypothetical protein 937 68.52 0 973975..974136 - 53 77462902 - RSP_6223 - hypothetical protein 938 64.77 0 974266..974898 - 210 77462903 - RSP_2349 - hypothetical protein 939 69.03 0 974973..975437 - 154 77462904 - RSP_2350 - hypothetical protein 940 67.56 0 976154..978163 - 669 77462905 - RSP_2351 - hypothetical protein 941 68.62 0 978176..979708 - 510 77462906 - RSP_2352 - putative terminase large subunit / phage terminase 942 71.97 0 979786..980181 - 131 77462907 - RSP_2353 - hypothetical protein 943 71.11 0 980178..980492 - 104 77462908 - RSP_6046 - hypothetical protein 944 68.82 0 980495..980911 - 138 77462909 - RSP_6047 - hypothetical protein 945 71.87 0 980904..981326 - 140 77462910 - RSP_2354 - hypothetical protein 946 48.34 -2 981816..983288 + 490 77462911 - RSP_2356 - hypothetical protein 947 66.38 0 983273..983623 - 116 77462912 - RSP_2355 - HNH nuclease / phage phi-105 holin-like protein 948 69.51 0 983626..984222 - 198 77462913 - RSP_2357 - hypothetical protein 949 66.83 0 984222..985484 - 420 77462914 - RSP_2358 - phage phi-C31 gp36-like protein /HK97 family major capsid protein 950 68.85 0 985754..986074 - 106 77462915 - RSP_2359 - hypothetical protein 951 68.59 0 986071..987264 - 397 77462916 - RSP_2360 - head HK97 family portal protein 952 62.60 -1 987339..989156 - 605 77462917 - RSP_2361 - putative integrase/resolvase recombinase protein phage-related integrase 953 66.79 0 989506..990288 + 260 77462918 - RSP_2362 - GntR family transcriptional regulator 954 71.11 0 990482..991246 + 254 77462919 - RSP_2363 - Short-chain dehydrogenase/reductase 955 65.91 0 991251..991907 + 218 77462920 fucA RSP_2364 - L-fuculose phosphate aldolase (class II) 956 65.32 0 991973..992935 + 320 77462921 - RSP_2365 - ABC sugar (ribose) transporter, periplasmic substrate-binding subunit 957 69.45 0 993119..994627 + 502 77462922 - RSP_2366 - ABC sugar (ribose) transporter, fused ATPase subunits 958 70.15 0 994634..995638 + 334 77462923 - RSP_2368 - ABC sugar (ribose) transporter, inner membrane subunit 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0