version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 839 71.76 0 869074..869898 - 274 77462804 - RSP_2253 - hydrolase or acyltransferase 840 69.55 0 870307..872043 + 578 77462805 - RSP_2254 - ABC efflux transporter, fused ATPase and inner membrane subunits 841 68.20 0 872149..874038 + 629 77462806 - RSP_2255 - acyl-CoA synthetase 842 71.92 0 874411..874848 - 145 77462807 dtd RSP_2256 - D-tyrosyl-tRNA deacylase 843 73.29 +1 874848..875768 - 306 77462808 - RSP_2257 - putative fructokinase 844 68.65 0 875782..876741 - 319 77462809 hemH RSP_2258 - phosphoribosylaminoimidazole-succinocarboxamide synthase 845 74.89 +1 876808..877245 - 145 77462810 - RSP_2259 - transmembrane protein 846 72.50 0 877250..878347 - 365 77462811 ydjG RSP_2260 - hypothetical protein 847 69.01 0 878349..879458 - 369 77462812 ydjI RSP_2261 - antifreeze protein, type I 848 66.35 0 879639..880277 - 212 77462813 - RSP_2262 - hypothetical protein 849 70.39 0 880293..881258 - 321 77462814 - RSP_2263 - hypothetical protein 850 69.19 0 881271..882461 - 396 77462815 telA RSP_2264 - tellurite resistance protein 851 72.92 0 882610..883488 - 292 77462816 - RSP_2265 - hypothetical protein 852 75.77 +1 883673..885199 - 508 77462817 rluB RSP_2266 - pseudouridine synthase, 853 75.06 +1 885533..885985 + 150 77462818 - RSP_2267 - hypothetical protein 854 66.09 0 885996..886688 - 230 77462819 - RSP_2268 - metallo beta lactamase superfamily protein 855 73.06 +1 886751..887407 + 218 77462820 - RSP_6222 - hypothetical protein 856 67.36 0 887451..887738 + 95 77462821 gatC RSP_6043 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C 857 69.04 0 887735..889210 + 491 77462822 gatA RSP_2270 - aspartyl/glutamyl-tRNA amidotransferase subunit A 858 71.16 0 889158..890048 + 296 77462823 - RSP_2271 - hypothetical protein 859 73.96 +1 890052..890723 + 223 77462824 ampD RSP_2272 - N-acetylmuramoyl-L-alanine amidase 860 70.56 0 891211..892443 - 410 77462825 - RSP_2273 - putative anaerobic phenylacetate CoA ligase 861 66.06 0 892440..893270 - 276 77462826 - RSP_2274 - branched chain amino acid ABC transporter ATPase 862 66.98 0 893357..894646 - 429 77462827 - RSP_2275 - branched chain amino acid ABC transporter periplasmic substrate-binding protein 863 64.90 0 894707..895783 - 358 77462828 - RSP_2276 - branched chain amino acid ABC transporter inner membrane protein 864 65.86 0 895787..896776 - 329 77462829 - RSP_2277 - branched chain amino acid ABC transporter inner membrane protein 865 64.40 -1 896911..897750 - 279 77462830 - RSP_2278 - branched chain amino acid ABC transporter ATPase 866 66.16 0 898039..900000 - 653 77462831 - RSP_2279 - long chain acyl-CoA synthetase 867 72.33 0 900561..902483 + 640 77462832 - RSP_2280 - PAS sensor hybrid histidine kinase 868 70.76 0 902480..903187 + 235 77462833 - RSP_2281 - two-component transcriptional regulator 869 75.57 +1 903198..904376 - 392 77462834 chrA RSP_2282 - chromate efflux pump, ChrA 870 63.77 -1 904801..905421 + 206 77462835 rpsD RSP_2283 - 30S ribosomal protein S4 871 68.23 0 905665..906750 + 361 77462836 - RSP_2284 - histidinol-phosphate aminotransferase 872 69.12 0 906750..907685 + 311 77462837 - RSP_6215 - cyclohexadienyl dehydrogenase 873 72.49 0 907691..908548 + 285 77462838 - RSP_2285 - hypothetical protein 874 72.59 0 908551..909546 - 331 77462839 - RSP_2286 - hypothetical protein 875 68.12 0 909607..910155 + 182 77462840 - RSP_2287 - ChaC-like protein 876 69.13 0 910229..911404 + 391 77462841 - RSP_2288 - hypothetical protein 877 71.55 0 911408..912985 + 525 77462842 - RSP_2289 - hypothetical protein 878 70.46 0 913317..913817 + 166 77462843 - RSP_2291 - hypothetical protein 879 65.67 0 914730..917045 - 771 77462844 clpA RSP_2293 - chaperonin clpA/B 880 66.80 0 917212..917979 - 255 77462845 gloB RSP_2294 - putative hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein 881 70.22 0 918041..918829 + 262 77462846 - RSP_2295 - hypothetical protein 882 66.67 0 919132..919692 + 186 77462847 atpH RSP_2296 - ATPase, delta (OSCP) subunit 883 66.15 0 919693..921231 + 512 77462848 atpA RSP_2297 - F0F1 ATP synthase subunit alpha 884 66.67 0 921254..922123 + 289 77462849 atpG RSP_2298 - F0F1 ATP synthase subunit gamma 885 66.25 0 922141..923568 + 475 77462850 atpD RSP_2299 - F0F1 ATP synthase subunit beta 886 69.92 0 923578..923976 + 132 77462851 atpC RSP_2300 - F0F1 ATP synthase subunit epsilon 887 64.12 -1 924402..925421 - 339 77462852 prsA RSP_2301 - phosphoribosyl pyrophosphate synthetase 888 73.10 +1 925553..926578 - 341 77462853 - RSP_2302 - L-threonine aldolase 889 65.58 0 926578..927039 - 153 77462854 - RSP_2303 - hypothetical protein 890 70.36 0 927079..927999 - 306 77462855 ribF RSP_2304 - FMN adenylyltransferase / riboflavin kinase 891 65.77 0 928027..928470 - 147 77462856 - RSP_2305 - MaoC family protein 892 68.34 0 928696..929589 - 297 77462857 - RSP_2306 - putative HAD superfamily protein 893 65.36 0 929740..930657 - 305 77462858 - RSP_2307 - putative manganese-dependent inorganic pyrophosphatase 894 71.03 0 930778..931029 + 83 77462859 - RSP_2308 - hypothetical protein 895 70.74 0 931046..932101 - 351 77462860 - RSP_2309 - hypothetical protein 896 61.81 -1 932218..932505 + 95 77462861 groES RSP_2310 - co-chaperonin GroES 897 65.02 0 932601..934244 + 547 77462862 groEL RSP_2311 - chaperonin GroEL 898 72.92 0 934513..935088 - 191 77462863 - RSP_2312 - hypothetical protein 899 69.00 0 935222..936208 + 328 77462864 - RSP_2313 - 2-hydroxyacid dehydrogenase 900 70.33 0 936536..937354 + 272 77462865 - RSP_2314 - oxidoreductase, chromogranin/secretogranin 901 66.67 0 937445..937750 + 101 77462866 - RSP_2315 - hypothetical protein 902 72.14 0 937932..939173 - 413 77462867 dadA RSP_2316 - D-amino acid dehydrogenase 903 67.19 0 939220..940365 - 381 77462868 - RSP_2317 - Iron-containing alcohol dehydrogenase 904 68.03 0 940362..941750 - 462 77462869 - RSP_2318 - putative aldehyde dehydrogenase 905 65.00 0 941763..943142 - 459 77462870 glnA RSP_2319 - L-glutamine synthetase 906 64.35 -1 943218..944255 - 345 77462871 - RSP_2320 - TRAP-T family transporter periplasmic binding protein 907 66.14 0 944312..945637 - 441 77462872 - RSP_2321 - TRAP-T family transporter 908 62.13 -1 945637..946143 - 168 77462873 - RSP_2322 - TRAP dicarboxylate family transporter DctQ subunit 909 69.54 0 946148..946912 - 254 77462874 - RSP_2323 - hypothetical protein 910 67.59 0 947087..947953 + 288 77462875 - RSP_2324 - RpiR family transcriptional regulator 911 66.14 0 948123..949262 - 379 77462876 rodA RSP_2325 - RodA, rod cell shape determining protein 912 69.18 0 949270..951216 - 648 77462877 pbpA RSP_2326 - peptidoglycan glycosyltransferase 913 71.30 0 951213..951752 - 179 77462878 - RSP_2327 - hypothetical protein 914 69.44 0 951745..952647 - 300 77462879 mreC RSP_2328 - rod shape-determining protein MreC 915 67.63 0 952681..953718 - 345 77462880 mreB RSP_2329 - rod shape-determining protein MreB 916 66.98 0 954067..955023 + 318 77462881 - RSP_6044 - Serine/alanine racemase VanTc3 917 66.23 0 955210..956799 - 529 77462882 leuA RSP_2330 - 2-isopropylmalate synthase 918 67.76 0 957264..957722 + 152 77462883 ppaZ RSP_2331 - PpaZ, a novel pseudoazurin precursor (blue copper protein) 919 69.85 0 958220..959725 - 501 77462884 - RSP_2332 - hypothetical protein 920 69.73 0 959907..961571 + 554 77462885 nadE RSP_2333 - NAD synthetase 921 75.66 +1 961677..962621 - 314 77462886 pfkB RSP_2334 - 6-phosphofructokinase 922 69.36 0 962768..963361 + 197 77462887 wrbA RSP_2335 - trp repressor binding protein WrbA, putative 923 65.42 0 963386..963625 - 79 77462888 - RSP_6045 - hypothetical protein 924 70.63 0 963757..964488 + 243 77462889 - RSP_2336 - hypothetical protein 925 71.43 0 964563..964814 + 83 77462890 - RSP_2337 - hypothetical protein 926 66.12 0 964900..965262 + 120 77462891 - RSP_2338 - hypothetical protein 927 63.56 -1 965250..965828 - 192 77462892 - RSP_2339 - hypothetical protein 928 68.34 0 965892..967202 - 436 77462893 - RSP_2340 - MiaB-like radical SAM protein 929 71.84 0 967364..968542 - 392 77462894 - RSP_2341 - hypothetical protein 930 66.47 0 968571..969074 - 167 77462895 gpt RSP_2342 - xanthine-guanine phosphoribosyltransferase 931 68.62 0 969084..969698 - 204 77462896 - RSP_2343 - RhtB family threonine efflux protein 932 65.09 0 969700..970524 - 274 77462897 fabI1 RSP_2344 - enoyl-(acyl carrier protein) reductase 933 68.82 0 970667..971269 + 200 77462898 pdxH RSP_2345 - pyridoxamine 5'-phosphate oxidase 934 64.64 0 971386..971928 + 180 77462899 - RSP_2346 - cold-shock DNA-binding protein family protein 935 71.00 0 971943..972404 + 153 77462900 - RSP_2347 - hypothetical protein 936 61.89 -1 973054..973848 - 264 77462901 - RSP_2348 - hypothetical protein 937 68.52 0 973975..974136 - 53 77462902 - RSP_6223 - hypothetical protein 938 64.77 0 974266..974898 - 210 77462903 - RSP_2349 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.