version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 598 65.29 0 618406..618696 + 96 77462563 rpmB RSP_2016 - 50S ribosomal protein L28 599 76.23 +1 618887..619231 + 114 77462564 - RSP_6029 - hypothetical protein 600 69.36 0 619261..619743 + 160 77462565 - RSP_2017 - hypothetical protein 601 67.95 0 619783..620094 - 103 77462566 - RSP_2018 - hypothetical protein 602 72.41 0 620302..620754 - 150 77462567 - RSP_2019 - hypothetical protein 603 69.75 0 621117..621602 - 161 77462568 - RSP_2020 - DHC, diheme cytochrome c 604 73.08 +1 621617..622006 - 129 77462569 shp RSP_2021 - Mono-heme class I cytochrome c 605 72.99 +1 622010..623101 - 363 77462570 - RSP_2022 - cytochrome b/diheme cytochrome c hybrid protein 606 77.61 +2 623291..623875 - 194 77462571 - RSP_2023 - hypothetical protein 607 64.25 -1 624198..624404 + 68 77462572 cspA RSP_2024 - cold-shock DNA-binding protein family protein 608 73.58 +1 624498..624815 - 105 77462573 - RSP_2025 - hypothetical protein 609 72.19 0 624857..625834 + 325 77462574 - RSP_2026 - AraC family transcriptional regulator 610 72.50 0 626074..626964 - 296 77462575 - RSP_2027 - LysR family transcriptional regulator 611 69.44 0 627062..627385 + 107 77462576 - RSP_2028 - hypothetical protein 612 73.46 +1 627382..628161 + 259 77462577 ucpA RSP_2029 - short chain dehydrogenase 613 66.88 0 628243..629184 - 313 77462578 - RSP_2030 - putative sensor histidine kinase 614 63.46 -1 629873..630277 + 134 77462579 - RSP_2032 - Gifsy-1 prophage protein 615 62.37 -1 630298..630576 + 92 77462580 - RSP_2033 - hypothetical protein 616 65.85 0 630649..631383 + 244 77462581 - RSP_2034 - CAAX amino protease 617 71.72 0 631399..631695 + 98 77462582 - RSP_6030 - hypothetical protein 618 65.25 0 631702..632406 - 234 77462583 - RSP_2035 - hypothetical protein 619 64.14 -1 632521..632718 + 65 77462584 - RSP_2036 - putative ECF/RNA polymerase sigma factor protein 620 69.58 0 632780..633466 + 228 77462585 - RSP_2037 - hypothetical protein 621 64.02 -1 633935..634387 + 150 77462586 - RSP_2038 - acetyltransferase 622 63.61 -1 634626..635378 + 250 77462587 linC RSP_2039 - short chain dehydrogenase 623 65.15 0 635422..635619 + 65 77462588 - RSP_2040 - putative transposase 624 69.12 0 635737..636591 + 284 77462589 - RSP_2041 - hypothetical protein 625 54.92 -2 636721..636984 + 87 77462590 - RSP_2043 - hypothetical protein 626 64.25 -1 636959..637414 - 151 77462591 - RSP_2042 - hypothetical protein 627 44.30 -2 637688..639064 + 458 77462592 - RSP_2044 - ATPase 628 56.57 -2 639541..641055 + 504 77462593 - RSP_2045 - hypothetical protein 629 56.52 -2 641174..642385 + 403 77462594 - RSP_2046 - hypothetical protein 630 57.36 -2 642382..644187 + 601 77462595 - RSP_2047 - ThiF family protein 631 56.07 -2 644180..644698 + 172 77462596 - RSP_2048 - hypothetical protein 632 67.07 0 644853..645350 - 165 77462597 - RSP_2049 - hypothetical protein 633 74.20 +1 645363..646172 - 269 77462598 - RSP_2050 - hypothetical protein 634 68.28 0 646227..647033 - 268 77462599 - RSP_2052 - N6 adenine-specific DNA methyltransferase, D12 class 635 63.47 -1 647337..648242 + 301 77462600 - RSP_2053 - RarD family protein 636 72.33 0 648313..648630 - 105 77462601 - RSP_2054 - hypothetical protein 637 69.81 0 648767..649084 - 105 77462602 - RSP_2055 - hypothetical protein 638 64.47 -1 649109..649426 - 105 77462603 - RSP_2056 - hypothetical protein 639 71.92 0 649433..650917 - 494 77462604 - RSP_2057 - hypothetical protein 640 71.83 0 650933..651823 - 296 77462605 - RSP_2058 - hypothetical protein 641 71.31 0 651823..656844 - 1673 77462606 - RSP_2059 - phage tail tape measure protein 642 73.12 +1 656968..657153 - 61 77462607 - RSP_2061 - hypothetical protein 643 71.32 0 657288..657674 - 128 77462608 - RSP_2062 - hypothetical protein 644 67.12 0 657671..658114 - 147 77462609 - RSP_2063 - hypothetical protein 645 71.39 0 658124..658504 - 126 77462610 - RSP_2064 - hypothetical protein 646 70.97 0 658508..659065 - 185 77462611 - RSP_2065 - hypothetical protein 647 69.37 0 659065..659397 - 110 77462612 - RSP_2066 - hypothetical protein 648 66.96 0 659394..659735 - 113 77462613 - RSP_6031 - hypothetical protein 649 71.49 0 659732..660166 - 144 77462614 - RSP_6032 - hypothetical protein 650 67.67 0 660237..661538 - 433 77462615 - RSP_2067 - prophage LambdaSo, HK97 family major capsid protein 651 68.81 0 661551..662390 - 279 77462616 - RSP_2068 - putative ClpP-like protease 652 67.15 0 662387..663637 - 416 77462617 - RSP_2069 - HK97 family phage portal protein 653 66.02 0 663637..665346 - 569 77462618 - RSP_2070 - putative Phage-related terminase 654 66.67 0 665348..665824 - 158 77462619 - RSP_2071 - hypothetical protein 655 71.33 0 665867..666766 - 299 77462620 - RSP_2072 - putative Phage-related holin protein 656 71.49 0 666873..667535 - 220 77462621 - RSP_6033 - hypothetical protein 657 73.12 +1 667532..668104 - 190 77462622 - RSP_2073 - hypothetical protein 658 70.18 0 668308..668991 - 227 77462623 - RSP_2074 - hypothetical protein 659 73.27 +1 668998..669633 - 211 77462624 - RSP_6034 - hypothetical protein 660 63.13 -1 669791..670129 - 112 77462625 - RSP_6035 - hypothetical protein 661 54.70 -2 670405..670755 + 116 77462626 - RSP_2075 - putative transcriptional regulator 662 57.76 -2 670762..671064 - 100 77462627 - RSP_2076 - hypothetical protein 663 74.77 +1 671395..671727 + 110 77462628 - RSP_2077 - hypothetical protein 664 70.43 0 671724..672122 + 132 77462629 - RSP_2078 - hypothetical protein 665 72.52 0 672245..674056 + 603 77462630 - RSP_2079 - ParB family protein 666 65.80 0 674132..674362 + 76 77462631 - RSP_6036 - hypothetical protein 667 68.81 0 674362..675387 + 341 77462632 - RSP_2080 - putative tyrosine recombinase 668 69.00 0 675541..676011 - 156 77462633 - RSP_2081 - GNAT family acetyltransferase 669 68.27 0 676328..676639 - 103 77462634 - RSP_2082 - putative NADH-ubiquinone oxidoreductase-related protein 670 66.62 0 676895..679078 + 727 77462635 uvrB RSP_2083 - excinuclease ABC subunit B 671 70.73 0 679417..680130 + 237 77462636 - RSP_2084 - hypothetical protein 672 68.13 0 680136..680408 - 90 77462637 - RSP_2085 - hypothetical protein 673 64.78 0 680509..680826 - 105 77462638 - RSP_2086 - putative antibiotic biosynthesis monooxygenase 674 68.20 0 680949..681209 + 86 77462639 - RSP_2087 - hypothetical protein 675 64.58 -1 681463..681606 + 47 77462640 - RSP_6220 - hypothetical protein 676 64.44 -1 681644..683443 - 599 77462641 lepA RSP_2088 - GTP-binding protein LepA 677 67.16 0 684379..687843 - 1154 77462642 pycA RSP_2090 - pyruvate carboxylase 678 67.60 0 688026..690377 + 783 77462643 - RSP_2092 - ATP-dependent DNA helicase Rep 679 74.69 +1 690398..691543 - 381 77462644 - RSP_2091 - putative benzoate transporter, BenE 680 63.89 -1 692464..692679 - 71 77462645 - RSP_6037 - hypothetical protein 681 71.47 0 692949..694010 + 353 77462646 - RSP_2093 - putative Mrp (multidrug resistance-associated proteins) family protein 682 65.09 0 694911..695417 + 168 77462647 - RSP_2095 - cell division protein MraZ 683 72.39 0 695421..696416 + 331 77462648 - RSP_6038 - methyltransferase MraW/YabC 684 68.33 0 696417..696776 + 119 77462649 - RSP_2097 - putative FtsL 685 69.12 0 696773..698566 + 597 77462650 ftsI RSP_2098 - cell division protein FtsI/penicillin-binding protein 2 686 73.72 +1 698581..700068 + 495 77462651 murE RSP_2099 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 687 74.20 +1 700157..701590 + 477 77462652 murF RSP_2100 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 688 65.84 0 701603..702685 + 360 77462653 mraY RSP_2101 - phospho-N-acetylmuramoyl-pentapeptide-transferase 689 72.16 0 702782..703363 + 193 77462654 - RSP_2102 - hypothetical protein 690 70.67 0 703796..705193 + 465 77462655 murD RSP_2103 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 691 69.21 0 705250..705720 + 156 77462656 - RSP_2104 - hypothetical protein 692 71.60 0 706074..706580 - 168 77462657 - RSP_2105 - hypothetical protein 693 67.10 0 706721..707887 + 388 77462658 ftsW RSP_2106 - cell division protein FtsW 694 72.51 0 707889..708983 + 364 77462659 murG RSP_2107 - N-acetylglucosaminyl transferase 695 68.65 0 708980..710392 + 470 77462660 murC RSP_2108 - UDP-N-acetylmuramate--L-alanine ligase 696 71.76 0 710406..710660 + 84 77462661 - RSP_2109 - hypothetical protein 697 70.01 0 710657..711583 + 308 77462662 murB RSP_2110 - UDP-N-acetylmuramate dehydrogenase 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0