version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 521 73.80 +1 537327..538013 + 228 77462486 - RSP_1938 - hypothetical protein 522 64.19 -1 538127..538933 - 268 77462487 - RSP_1939 - NADPH-ferredoxin reductase 523 67.16 0 538996..539403 - 135 77462488 - RSP_1940 - hypothetical protein 524 67.36 0 539400..540116 - 238 77462489 cysH RSP_1941 - phosphoadenosine phosphosulfate reductase 525 67.74 0 540145..541815 - 556 77462490 - RSP_1942 - sulfite/nitrite reductase hemoprotein subunit 526 70.26 0 541842..542147 - 101 77462491 - RSP_1943 - hypothetical protein 527 72.94 +1 542144..542908 - 254 77462492 - RSP_1944 - uroporphyrinogen-III C-methyltransferase 528 65.37 0 543051..543512 + 153 77462493 - RSP_1945 - AsnC family transcriptional regulator 529 71.32 0 543683..544864 - 393 77462494 - RSP_1946 - cytochrome P450 hydroxylase 530 71.27 0 545193..545930 - 245 77462495 cbbJ RSP_1947 - triosephosphate isomerase 531 62.18 -1 546042..546398 - 118 77462496 - RSP_1948 - hypothetical protein 532 64.74 0 546482..546844 - 120 77462497 - RSP_1949 - hypothetical protein 533 63.93 -1 547132..547935 + 267 77462498 - RSP_1950 - hypothetical protein 534 61.25 -1 548205..548555 - 116 77462499 - RSP_1951 - hypothetical protein 535 61.97 -1 548589..548822 - 77 77462500 - RSP_1952 - cold-shock DNA-binding protein family protein 536 65.05 0 549413..550153 - 246 77462501 - RSP_1953 - Crp/FNR family transcriptional regulator 537 67.79 0 550280..550546 + 88 77462502 - RSP_1954 - hypothetical protein 538 67.55 0 550603..551391 + 262 77462503 - RSP_1955 - hypothetical protein 539 64.00 -1 551878..552252 + 124 77462504 - RSP_1956 - hypothetical protein 540 63.14 -1 552259..552570 - 103 77462505 - RSP_1957 - hypothetical protein 541 59.52 -2 554166..554417 + 83 77462506 - RSP_1961 - hypothetical protein 542 55.48 -2 554720..555148 + 142 77462507 - RSP_1962 - hypothetical protein 543 49.32 -2 555305..555742 - 145 77462508 - RSP_1963 - hypothetical protein 544 65.29 0 555770..556060 - 96 77462509 - RSP_1964 - hypothetical protein 545 61.88 -1 556550..557740 + 396 77462510 - RSP_1965 - putative membrane fusion protein family member 546 63.67 -1 558385..558684 + 99 77462511 - RSP_1967 - hypothetical protein 547 63.47 -1 558661..559536 - 291 77462512 - RSP_1966 - ISSod13, transposase 548 67.23 0 559600..560490 + 296 77462513 - RSP_1968 - integrase/recombinase 549 69.72 0 560737..561783 + 348 77462514 purM RSP_1969 - phosphoribosylaminoimidazole synthetase 550 73.04 +1 561822..562370 + 182 77462515 - RSP_1970 - phosphoribosylglycinamide formyltransferase 551 66.93 0 562467..563624 + 385 77462516 rnd RSP_1971 - ribonuclease D 552 72.19 0 563661..564113 - 150 77462517 - RSP_1972 - hypothetical protein 553 68.07 0 564243..564671 + 142 77462518 - RSP_1973 - SufE protein 554 62.07 -1 564694..565041 - 115 77462519 - RSP_1974 - hypothetical protein 555 70.23 0 565102..566898 - 598 77462520 - RSP_1975 - aminopeptidase P 556 68.71 0 566898..568757 - 619 77462521 cobT RSP_1976 - aerobic cobalt chelatase, CobT subunit 557 73.33 +1 568809..569138 - 109 77462522 - RSP_6027 - hypothetical protein 558 73.94 +1 569140..569469 - 109 77462523 - RSP_6028 - hypothetical protein 559 63.29 -1 569466..570560 - 364 77462524 cobS RSP_1977 - hydrogenobyrinic acid a,c-diamide cobaltochelatase 560 64.15 -1 570606..571241 - 211 77462525 - RSP_1978 - DnaJ family molecular chaperone 561 68.22 0 571316..571573 + 85 77462526 - RSP_1979 - stress induced morphogen, BolA 562 69.24 0 571682..573898 - 738 77462527 glcB RSP_1980 - malate synthase G 563 75.38 +1 573941..575305 - 454 77462528 - RSP_1981 - deoxyribodipyrimidine photo-lyase type I 564 69.91 0 575763..578318 + 851 77462529 - RSP_1982 - aminopeptidase N 565 66.67 0 578452..579336 + 294 77462530 sqdA RSP_1983 - phospholipid/glycerol acyltransferase 566 72.16 0 579524..580669 + 381 77462531 - RSP_1984 - histidinol-phosphate aminotransferase 567 72.30 0 580691..581134 - 147 77462532 - RSP_1985 - hypothetical protein 568 65.08 0 581296..582807 - 503 77462533 gatB RSP_1986 - aspartyl/glutamyl-tRNA amidotransferase subunit B 569 71.69 0 582976..583572 + 198 77462534 - RSP_1987 - hypothetical protein 570 71.30 0 583576..583920 - 114 77462535 - RSP_1988 - hypothetical protein 571 67.41 0 583987..586950 - 987 77462536 valS RSP_1989 - valyl-tRNA synthetase 572 68.06 0 587069..587500 - 143 77462537 - RSP_1990 - AsnC family transcriptional regulator 573 68.59 0 587720..588865 + 381 77462538 - RSP_1991 - putative ornithine decarboxylase 574 70.30 0 588944..590125 + 393 77462539 - RSP_1992 - hypothetical protein 575 69.18 0 590153..590629 - 158 77462540 - RSP_1993 - hypothetical protein 576 64.10 -1 590962..592248 - 428 77462541 gltA RSP_1994 - citrate synthase 577 66.60 0 592355..593770 - 471 77462542 gltX RSP_1995 - glutamyl-tRNA synthetase 578 72.51 0 593904..595958 + 684 77462543 - RSP_1996 - putative competence protein 579 67.25 0 596014..596700 - 228 77462544 lexA RSP_1997 - LexA repressor 580 72.32 0 596757..597941 - 394 77462545 - RSP_1998 - molybdopterin molybdochelatase 581 70.00 0 597938..598417 - 159 77462546 moaC RSP_2000 - molybdenum cofactor biosynthesis protein C 582 69.62 0 598417..599229 - 270 77462547 trpC RSP_6214 - indole-3-glycerol-phosphate synthase 583 71.78 0 599260..600276 - 338 77462548 trpD RSP_2001 - anthranilate phosphoribosyltransferase 584 68.88 0 600273..600860 - 195 77462549 trpG RSP_2002 - anthranilate synthase component II 585 77.34 +2 601039..602472 + 477 77462550 yibQ RSP_2003 - YibQ protein 586 68.98 0 602636..604147 - 503 77462551 trpE RSP_2004 - anthranilate synthase component I 587 71.11 0 604158..606023 - 621 77462552 ybaU RSP_2005 - peptidyl-prolyl cis-trans isomerse 588 74.03 +1 606221..608203 + 660 77462553 amsA RSP_2006 - hypothetical protein 589 75.64 +1 608386..609009 - 207 77462554 - RSP_2007 - hypothetical protein 590 70.22 0 609595..610776 + 393 77462555 argD RSP_2008 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 591 67.21 0 610890..611816 + 308 77462556 argF RSP_2009 - ornithine carbamoyltransferase 592 67.63 0 612040..612246 - 68 77462557 - RSP_2010 - hypothetical protein 593 75.35 +1 612424..612918 - 164 77462558 - RSP_2011 - putative transcription elongation factor 594 70.86 0 612944..613420 - 158 77462559 - RSP_2012 - NUDIX hydrolase, MutT 595 75.69 +1 613899..616325 - 808 77462560 - RSP_2013 - DEAD/DEAH box helicase 596 73.81 +1 616371..617084 - 237 77462561 - RSP_2014 - hypothetical protein 597 74.07 +1 617221..618192 + 323 77462562 argK RSP_2015 - arginine/ornithine transport system ATPase 598 65.29 0 618406..618696 + 96 77462563 rpmB RSP_2016 - 50S ribosomal protein L28 599 76.23 +1 618887..619231 + 114 77462564 - RSP_6029 - hypothetical protein 600 69.36 0 619261..619743 + 160 77462565 - RSP_2017 - hypothetical protein 601 67.95 0 619783..620094 - 103 77462566 - RSP_2018 - hypothetical protein 602 72.41 0 620302..620754 - 150 77462567 - RSP_2019 - hypothetical protein 603 69.75 0 621117..621602 - 161 77462568 - RSP_2020 - DHC, diheme cytochrome c 604 73.08 +1 621617..622006 - 129 77462569 shp RSP_2021 - Mono-heme class I cytochrome c 605 72.99 +1 622010..623101 - 363 77462570 - RSP_2022 - cytochrome b/diheme cytochrome c hybrid protein 606 77.61 +2 623291..623875 - 194 77462571 - RSP_2023 - hypothetical protein 607 64.25 -1 624198..624404 + 68 77462572 cspA RSP_2024 - cold-shock DNA-binding protein family protein 608 73.58 +1 624498..624815 - 105 77462573 - RSP_2025 - hypothetical protein 609 72.19 0 624857..625834 + 325 77462574 - RSP_2026 - AraC family transcriptional regulator 610 72.50 0 626074..626964 - 296 77462575 - RSP_2027 - LysR family transcriptional regulator 611 69.44 0 627062..627385 + 107 77462576 - RSP_2028 - hypothetical protein 612 73.46 +1 627382..628161 + 259 77462577 ucpA RSP_2029 - short chain dehydrogenase 613 66.88 0 628243..629184 - 313 77462578 - RSP_2030 - putative sensor histidine kinase 614 63.46 -1 629873..630277 + 134 77462579 - RSP_2032 - Gifsy-1 prophage protein 615 62.37 -1 630298..630576 + 92 77462580 - RSP_2033 - hypothetical protein 616 65.85 0 630649..631383 + 244 77462581 - RSP_2034 - CAAX amino protease 617 71.72 0 631399..631695 + 98 77462582 - RSP_6030 - hypothetical protein 618 65.25 0 631702..632406 - 234 77462583 - RSP_2035 - hypothetical protein 619 64.14 -1 632521..632718 + 65 77462584 - RSP_2036 - putative ECF/RNA polymerase sigma factor protein 620 69.58 0 632780..633466 + 228 77462585 - RSP_2037 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.