version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 476 70.81 0 494021..495322 - 433 77462441 - RSP_1896 - guanine deaminase 477 68.91 0 495484..496818 + 444 77462442 mgtE RSP_1897 - Mg/Co/Ni transporter, MgtE 478 73.69 +1 496815..497369 + 184 77462443 - RSP_1898 - putative 5-formyltetrahydrofolate cyclo-ligase 479 64.53 -1 497371..498681 - 436 77462444 - RSP_1899 - ATPase 480 69.64 0 498697..499200 - 167 77462445 - RSP_1900 - hypothetical protein 481 68.20 0 499203..500051 - 282 77462446 - RSP_1901 - TPR repeat-containing protein 482 71.08 0 500089..500655 - 188 77462447 - RSP_1902 - TPR repeat-containing protein 483 66.77 0 500662..501642 - 326 77462448 - RSP_1903 - putative Flp pilus assembly protein TadC 484 64.91 0 501646..502614 - 322 77462449 - RSP_1904 - putative Flp pilus assembly protein TadB 485 68.18 0 502622..504079 - 485 77462450 - RSP_1905 - putative Flp pilus assembly protein ATPase CpaF 486 67.37 0 504100..505371 - 423 77462451 - RSP_1907 - putative Flp pilus assembly protein ATPase CpaE 487 69.78 0 505718..506359 - 213 77462452 - RSP_1908 - OmpA/MotB family outer membrane protein 488 67.10 0 506365..507750 - 461 77462453 - RSP_1909 - Outer membrane general secretion pathway protein, secretin 489 67.39 0 508004..508828 - 274 77462454 - RSP_1910 - putative Flp pilus assembly protein CpaB 490 62.75 -1 508898..509101 - 67 77462455 - RSP_6219 - hypothetical protein 491 63.52 -1 509291..509608 - 105 77462456 - RSP_6025 - hypothetical protein 492 72.95 +1 509868..510758 + 296 77462457 - RSP_1911 - soluble lytic murein transglycosylase 493 71.67 0 510817..511056 - 79 77462458 - RSP_1912 - hypothetical protein 494 66.03 0 511100..511729 - 209 77462459 - RSP_1913 - butyryl-CoA:acetate CoA transferase 495 66.81 0 511745..512443 - 232 77462460 - RSP_1914 - 3-ketoacid CoA transferase alpha subunit 496 71.32 0 512992..513915 + 307 77462461 - RSP_1915 - LysR family transcriptional regulator 497 71.46 0 514055..514576 - 173 77462462 - RSP_6026 - putative acetyltransferase 498 68.00 0 514570..515169 - 199 77462463 - RSP_1916 - 2-hydroxychromene-2-carboxylate isomerase 499 68.21 0 515166..515684 - 172 77462464 - RSP_1917 - hypothetical protein 500 69.43 0 515824..516801 + 325 77462465 - RSP_1918 - alpha/beta hydrolase 501 65.93 0 516829..517374 + 181 77462466 - RSP_1919 - hypothetical protein 502 72.06 0 517418..518233 - 271 77462467 - RSP_1920 - pyridoxal kinase 503 71.07 0 518284..518964 - 226 77462468 - RSP_1921 - MOSC domain-containing protein 504 75.44 +1 519356..520768 + 470 77462469 - RSP_1922 - GntR family transcriptional regulator 505 69.81 0 520770..521756 - 328 77462470 bioB RSP_1923 - biotin synthase 506 71.69 0 521753..522190 - 145 77462471 - RSP_1924 - BioY family protein 507 68.16 0 522394..523062 - 222 77462472 - RSP_1925 - GntR family transcriptional regulator 508 70.81 0 523580..524521 + 313 77462473 - RSP_1926 - tRNA-dihydrouridine synthase A 509 69.72 0 524602..525420 + 272 77462474 - RSP_1927 - hypothetical protein 510 67.87 0 525735..527225 - 496 77462475 dnaB RSP_1928 - replicative DNA helicase 511 67.38 0 527494..528192 - 232 77462476 pyrE RSP_1929 - orotate phosphoribosyltransferase 512 71.66 0 528235..529275 - 346 77462477 pyrC RSP_1930 - dihydroorotase 513 70.05 0 529420..530334 + 304 77462478 - RSP_1931 - AAA family ATPase 514 72.35 0 530439..531635 + 398 77462479 - RSP_1932 - hypothetical protein 515 69.81 0 531708..532184 + 158 77462480 - RSP_6241 - hypothetical protein 516 71.51 0 532399..534504 + 701 77462481 - RSP_1933 - OmpA/MotB family outer membrane protein 517 73.63 +1 534620..535021 + 133 77462482 - RSP_1934 - sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis 518 73.07 +1 535062..535592 + 176 77462483 - RSP_1935 - sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis 519 73.03 +1 535592..536596 + 334 77462484 - RSP_1936 - molybdopterin biosynthesis protein 520 62.05 -1 536668..537252 - 194 77462485 infC RSP_1937 - translation initiation factor IF-3 521 73.80 +1 537327..538013 + 228 77462486 - RSP_1938 - hypothetical protein 522 64.19 -1 538127..538933 - 268 77462487 - RSP_1939 - NADPH-ferredoxin reductase 523 67.16 0 538996..539403 - 135 77462488 - RSP_1940 - hypothetical protein 524 67.36 0 539400..540116 - 238 77462489 cysH RSP_1941 - phosphoadenosine phosphosulfate reductase 525 67.74 0 540145..541815 - 556 77462490 - RSP_1942 - sulfite/nitrite reductase hemoprotein subunit 526 70.26 0 541842..542147 - 101 77462491 - RSP_1943 - hypothetical protein 527 72.94 +1 542144..542908 - 254 77462492 - RSP_1944 - uroporphyrinogen-III C-methyltransferase 528 65.37 0 543051..543512 + 153 77462493 - RSP_1945 - AsnC family transcriptional regulator 529 71.32 0 543683..544864 - 393 77462494 - RSP_1946 - cytochrome P450 hydroxylase 530 71.27 0 545193..545930 - 245 77462495 cbbJ RSP_1947 - triosephosphate isomerase 531 62.18 -1 546042..546398 - 118 77462496 - RSP_1948 - hypothetical protein 532 64.74 0 546482..546844 - 120 77462497 - RSP_1949 - hypothetical protein 533 63.93 -1 547132..547935 + 267 77462498 - RSP_1950 - hypothetical protein 534 61.25 -1 548205..548555 - 116 77462499 - RSP_1951 - hypothetical protein 535 61.97 -1 548589..548822 - 77 77462500 - RSP_1952 - cold-shock DNA-binding protein family protein 536 65.05 0 549413..550153 - 246 77462501 - RSP_1953 - Crp/FNR family transcriptional regulator 537 67.79 0 550280..550546 + 88 77462502 - RSP_1954 - hypothetical protein 538 67.55 0 550603..551391 + 262 77462503 - RSP_1955 - hypothetical protein 539 64.00 -1 551878..552252 + 124 77462504 - RSP_1956 - hypothetical protein 540 63.14 -1 552259..552570 - 103 77462505 - RSP_1957 - hypothetical protein 541 59.52 -2 554166..554417 + 83 77462506 - RSP_1961 - hypothetical protein 542 55.48 -2 554720..555148 + 142 77462507 - RSP_1962 - hypothetical protein 543 49.32 -2 555305..555742 - 145 77462508 - RSP_1963 - hypothetical protein 544 65.29 0 555770..556060 - 96 77462509 - RSP_1964 - hypothetical protein 545 61.88 -1 556550..557740 + 396 77462510 - RSP_1965 - putative membrane fusion protein family member 546 63.67 -1 558385..558684 + 99 77462511 - RSP_1967 - hypothetical protein 547 63.47 -1 558661..559536 - 291 77462512 - RSP_1966 - ISSod13, transposase 548 67.23 0 559600..560490 + 296 77462513 - RSP_1968 - integrase/recombinase 549 69.72 0 560737..561783 + 348 77462514 purM RSP_1969 - phosphoribosylaminoimidazole synthetase 550 73.04 +1 561822..562370 + 182 77462515 - RSP_1970 - phosphoribosylglycinamide formyltransferase 551 66.93 0 562467..563624 + 385 77462516 rnd RSP_1971 - ribonuclease D 552 72.19 0 563661..564113 - 150 77462517 - RSP_1972 - hypothetical protein 553 68.07 0 564243..564671 + 142 77462518 - RSP_1973 - SufE protein 554 62.07 -1 564694..565041 - 115 77462519 - RSP_1974 - hypothetical protein 555 70.23 0 565102..566898 - 598 77462520 - RSP_1975 - aminopeptidase P 556 68.71 0 566898..568757 - 619 77462521 cobT RSP_1976 - aerobic cobalt chelatase, CobT subunit 557 73.33 +1 568809..569138 - 109 77462522 - RSP_6027 - hypothetical protein 558 73.94 +1 569140..569469 - 109 77462523 - RSP_6028 - hypothetical protein 559 63.29 -1 569466..570560 - 364 77462524 cobS RSP_1977 - hydrogenobyrinic acid a,c-diamide cobaltochelatase 560 64.15 -1 570606..571241 - 211 77462525 - RSP_1978 - DnaJ family molecular chaperone 561 68.22 0 571316..571573 + 85 77462526 - RSP_1979 - stress induced morphogen, BolA 562 69.24 0 571682..573898 - 738 77462527 glcB RSP_1980 - malate synthase G 563 75.38 +1 573941..575305 - 454 77462528 - RSP_1981 - deoxyribodipyrimidine photo-lyase type I 564 69.91 0 575763..578318 + 851 77462529 - RSP_1982 - aminopeptidase N 565 66.67 0 578452..579336 + 294 77462530 sqdA RSP_1983 - phospholipid/glycerol acyltransferase 566 72.16 0 579524..580669 + 381 77462531 - RSP_1984 - histidinol-phosphate aminotransferase 567 72.30 0 580691..581134 - 147 77462532 - RSP_1985 - hypothetical protein 568 65.08 0 581296..582807 - 503 77462533 gatB RSP_1986 - aspartyl/glutamyl-tRNA amidotransferase subunit B 569 71.69 0 582976..583572 + 198 77462534 - RSP_1987 - hypothetical protein 570 71.30 0 583576..583920 - 114 77462535 - RSP_1988 - hypothetical protein 571 67.41 0 583987..586950 - 987 77462536 valS RSP_1989 - valyl-tRNA synthetase 572 68.06 0 587069..587500 - 143 77462537 - RSP_1990 - AsnC family transcriptional regulator 573 68.59 0 587720..588865 + 381 77462538 - RSP_1991 - putative ornithine decarboxylase 574 70.30 0 588944..590125 + 393 77462539 - RSP_1992 - hypothetical protein 575 69.18 0 590153..590629 - 158 77462540 - RSP_1993 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.