version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 439 69.48 0 453792..455885 + 697 77462404 glyS RSP_1858 - glycyl-tRNA synthetase subunit beta 440 71.50 0 456004..458550 + 848 77462405 ppdK RSP_1859 - pyruvate phosphate dikinase 441 72.34 0 458768..459490 + 240 77462406 - RSP_1860 - hypothetical protein 442 72.09 0 459590..460492 + 300 77462407 - RSP_1861 - dihydroneopterin aldolase 443 73.31 +1 460538..461575 + 345 77462408 - RSP_1862 - dihydropteroate synthase 444 71.28 0 461572..462915 + 447 77462409 - RSP_1863 - phosphoglucosamine mutase 445 67.58 0 463014..463232 + 72 77462410 - RSP_1864 - hypothetical protein 446 63.64 -1 463305..464327 - 340 77462411 - RSP_1865 - ketol-acid reductoisomerase 447 69.30 0 464457..464912 + 151 77462412 - RSP_1866 - AsnC family transcriptional regulator 448 72.11 0 464909..465367 + 152 77462413 - RSP_1867 - AsnC family transcriptional regulator 449 70.74 0 465545..466672 + 375 77462414 - RSP_1868 - serine-pyruvate aminotransferase 450 72.17 0 466677..467876 - 399 77462415 - RSP_1869 - 2-octaprenyl-6-methoxyphenyl hydroxylase 451 63.64 -1 467928..468158 - 76 77462416 - RSP_6022 - hypothetical protein 452 68.36 0 468239..468886 - 215 77462417 - RSP_1870 - hydrolase 453 69.97 0 469002..469637 + 211 77462418 - RSP_1871 - GntR family transcriptional regulator 454 72.12 0 469645..471459 - 604 77462419 - RSP_1872 - glycosyl transferase family protein 455 69.61 0 471693..472574 - 293 77462420 - RSP_1873 - hypothetical protein 456 69.85 0 472656..473819 - 387 77462421 carA RSP_1874 - carbamoyl phosphate synthase small subunit 457 67.97 0 473997..474455 + 152 77462422 - RSP_1875 - hypothetical protein 458 71.00 0 474764..475294 - 176 77462423 - RSP_1876 - hypothetical protein 459 63.32 -1 475308..477008 - 566 77462424 coxI RSP_1877 - cytochrome c oxidase, aa3 type, subunit I 460 70.47 0 477423..478079 - 218 77462425 lipB RSP_1878 - lipoyltransferase 461 72.44 0 478176..479735 + 519 77462426 - RSP_1880 - hypothetical protein 462 65.31 0 480233..481336 + 367 77462427 - RSP_1882 - ABC polyamine/opine transporter, ATPase subunit 463 65.11 0 481391..482482 + 363 77462428 - RSP_1883 - ABC polyamine/opine transporter, periplasmic substrate-binding protein 464 68.24 0 482534..483808 + 424 77462429 - RSP_1884 - ABC polyamine/opine transporter, inner membrane subunit 465 65.79 0 483887..484795 + 302 77462430 - RSP_1886 - ABC polyamine/opine transporter, inner membrane subunit 466 57.14 -2 484975..485142 + 55 77462431 rpmG RSP_1887 - 50S ribosomal protein L33 467 74.07 +1 485217..485702 + 161 77462432 - RSP_1888 - acetyltransferase 468 63.56 -1 485753..486493 - 246 77462433 - RSP_1889 - hypothetical protein 469 74.46 +1 486624..486854 - 76 77462434 - RSP_6024 - hypothetical protein 470 69.35 0 486939..487907 + 322 77462435 - RSP_1890 - LysR family transcriptional regulator 471 73.12 +1 487915..488874 - 319 77462436 - RSP_1891 - Zinc-binding dehydrogenase 472 64.19 -1 489235..489597 + 120 77462437 - RSP_1892 - XRE family transcriptional regulator 473 70.91 0 489686..490486 + 266 77462438 - RSP_1893 - inositol monophosphatase family protein 474 67.18 0 490925..491314 + 129 77462439 - RSP_1894 - hypothetical protein 475 69.33 0 491614..493977 + 787 77462440 - RSP_1895 - small-conductance mechanosensitive ion channel 476 70.81 0 494021..495322 - 433 77462441 - RSP_1896 - guanine deaminase 477 68.91 0 495484..496818 + 444 77462442 mgtE RSP_1897 - Mg/Co/Ni transporter, MgtE 478 73.69 +1 496815..497369 + 184 77462443 - RSP_1898 - putative 5-formyltetrahydrofolate cyclo-ligase 479 64.53 -1 497371..498681 - 436 77462444 - RSP_1899 - ATPase 480 69.64 0 498697..499200 - 167 77462445 - RSP_1900 - hypothetical protein 481 68.20 0 499203..500051 - 282 77462446 - RSP_1901 - TPR repeat-containing protein 482 71.08 0 500089..500655 - 188 77462447 - RSP_1902 - TPR repeat-containing protein 483 66.77 0 500662..501642 - 326 77462448 - RSP_1903 - putative Flp pilus assembly protein TadC 484 64.91 0 501646..502614 - 322 77462449 - RSP_1904 - putative Flp pilus assembly protein TadB 485 68.18 0 502622..504079 - 485 77462450 - RSP_1905 - putative Flp pilus assembly protein ATPase CpaF 486 67.37 0 504100..505371 - 423 77462451 - RSP_1907 - putative Flp pilus assembly protein ATPase CpaE 487 69.78 0 505718..506359 - 213 77462452 - RSP_1908 - OmpA/MotB family outer membrane protein 488 67.10 0 506365..507750 - 461 77462453 - RSP_1909 - Outer membrane general secretion pathway protein, secretin 489 67.39 0 508004..508828 - 274 77462454 - RSP_1910 - putative Flp pilus assembly protein CpaB 490 62.75 -1 508898..509101 - 67 77462455 - RSP_6219 - hypothetical protein 491 63.52 -1 509291..509608 - 105 77462456 - RSP_6025 - hypothetical protein 492 72.95 +1 509868..510758 + 296 77462457 - RSP_1911 - soluble lytic murein transglycosylase 493 71.67 0 510817..511056 - 79 77462458 - RSP_1912 - hypothetical protein 494 66.03 0 511100..511729 - 209 77462459 - RSP_1913 - butyryl-CoA:acetate CoA transferase 495 66.81 0 511745..512443 - 232 77462460 - RSP_1914 - 3-ketoacid CoA transferase alpha subunit 496 71.32 0 512992..513915 + 307 77462461 - RSP_1915 - LysR family transcriptional regulator 497 71.46 0 514055..514576 - 173 77462462 - RSP_6026 - putative acetyltransferase 498 68.00 0 514570..515169 - 199 77462463 - RSP_1916 - 2-hydroxychromene-2-carboxylate isomerase 499 68.21 0 515166..515684 - 172 77462464 - RSP_1917 - hypothetical protein 500 69.43 0 515824..516801 + 325 77462465 - RSP_1918 - alpha/beta hydrolase 501 65.93 0 516829..517374 + 181 77462466 - RSP_1919 - hypothetical protein 502 72.06 0 517418..518233 - 271 77462467 - RSP_1920 - pyridoxal kinase 503 71.07 0 518284..518964 - 226 77462468 - RSP_1921 - MOSC domain-containing protein 504 75.44 +1 519356..520768 + 470 77462469 - RSP_1922 - GntR family transcriptional regulator 505 69.81 0 520770..521756 - 328 77462470 bioB RSP_1923 - biotin synthase 506 71.69 0 521753..522190 - 145 77462471 - RSP_1924 - BioY family protein 507 68.16 0 522394..523062 - 222 77462472 - RSP_1925 - GntR family transcriptional regulator 508 70.81 0 523580..524521 + 313 77462473 - RSP_1926 - tRNA-dihydrouridine synthase A 509 69.72 0 524602..525420 + 272 77462474 - RSP_1927 - hypothetical protein 510 67.87 0 525735..527225 - 496 77462475 dnaB RSP_1928 - replicative DNA helicase 511 67.38 0 527494..528192 - 232 77462476 pyrE RSP_1929 - orotate phosphoribosyltransferase 512 71.66 0 528235..529275 - 346 77462477 pyrC RSP_1930 - dihydroorotase 513 70.05 0 529420..530334 + 304 77462478 - RSP_1931 - AAA family ATPase 514 72.35 0 530439..531635 + 398 77462479 - RSP_1932 - hypothetical protein 515 69.81 0 531708..532184 + 158 77462480 - RSP_6241 - hypothetical protein 516 71.51 0 532399..534504 + 701 77462481 - RSP_1933 - OmpA/MotB family outer membrane protein 517 73.63 +1 534620..535021 + 133 77462482 - RSP_1934 - sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis 518 73.07 +1 535062..535592 + 176 77462483 - RSP_1935 - sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis 519 73.03 +1 535592..536596 + 334 77462484 - RSP_1936 - molybdopterin biosynthesis protein 520 62.05 -1 536668..537252 - 194 77462485 infC RSP_1937 - translation initiation factor IF-3 521 73.80 +1 537327..538013 + 228 77462486 - RSP_1938 - hypothetical protein 522 64.19 -1 538127..538933 - 268 77462487 - RSP_1939 - NADPH-ferredoxin reductase 523 67.16 0 538996..539403 - 135 77462488 - RSP_1940 - hypothetical protein 524 67.36 0 539400..540116 - 238 77462489 cysH RSP_1941 - phosphoadenosine phosphosulfate reductase 525 67.74 0 540145..541815 - 556 77462490 - RSP_1942 - sulfite/nitrite reductase hemoprotein subunit 526 70.26 0 541842..542147 - 101 77462491 - RSP_1943 - hypothetical protein 527 72.94 +1 542144..542908 - 254 77462492 - RSP_1944 - uroporphyrinogen-III C-methyltransferase 528 65.37 0 543051..543512 + 153 77462493 - RSP_1945 - AsnC family transcriptional regulator 529 71.32 0 543683..544864 - 393 77462494 - RSP_1946 - cytochrome P450 hydroxylase 530 71.27 0 545193..545930 - 245 77462495 cbbJ RSP_1947 - triosephosphate isomerase 531 62.18 -1 546042..546398 - 118 77462496 - RSP_1948 - hypothetical protein 532 64.74 0 546482..546844 - 120 77462497 - RSP_1949 - hypothetical protein 533 63.93 -1 547132..547935 + 267 77462498 - RSP_1950 - hypothetical protein 534 61.25 -1 548205..548555 - 116 77462499 - RSP_1951 - hypothetical protein 535 61.97 -1 548589..548822 - 77 77462500 - RSP_1952 - cold-shock DNA-binding protein family protein 536 65.05 0 549413..550153 - 246 77462501 - RSP_1953 - Crp/FNR family transcriptional regulator 537 67.79 0 550280..550546 + 88 77462502 - RSP_1954 - hypothetical protein 538 67.55 0 550603..551391 + 262 77462503 - RSP_1955 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.