version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 383 69.75 0 388695..388856 + 53 77462348 ccmD RSP_1804 - Heme exporter protein D 384 70.19 0 388849..389388 + 179 77462349 ccmG RSP_1805 - thiol-disulfide interchange protein 385 66.07 0 389587..392271 - 894 161723329 - RSP_1806 - aconitate hydratase 386 70.48 0 392493..393200 + 235 77462351 - RSP_1807 - hypothetical protein 387 76.39 +1 393375..394433 - 352 77462352 - RSP_6019 - hypothetical protein 388 65.83 0 394430..395503 - 357 77462353 trpS RSP_1808 - tryptophanyl-tRNA synthetase 389 70.43 0 396284..397825 - 513 77462354 mviN RSP_1810 - putative virulence factor, MviN 390 68.13 0 397822..400614 - 930 77462355 glnD RSP_1811 - PII uridylyl-transferase 391 72.11 0 400598..401773 - 391 77462356 - RSP_1812 - hypothetical protein 392 73.20 +1 401856..402743 + 295 77462357 - RSP_1813 - hypothetical protein 393 71.19 0 402740..403093 + 117 77462358 - RSP_1814 - hypothetical protein 394 65.93 0 403146..404096 + 316 77462359 gshB RSP_1815 - glutathione synthetase 395 73.03 +1 404461..405999 - 512 77462360 - RSP_1816 - Mg chelatase-related protein 396 70.89 0 406088..406324 - 78 77462361 - RSP_1817 - hypothetical protein 397 69.61 0 406331..408643 - 770 77462362 feoB RSP_1818 - Fe2+ transport system protein B 398 71.67 0 408640..408879 - 79 77462363 feoA1 RSP_1819 - ferrous iron transport protein A 399 67.07 0 408886..409134 - 82 77462364 feoA2 RSP_6020 - ferrous iron transport protein A 400 64.51 -1 409736..410245 - 169 77462365 - RSP_1820 - hypothetical protein 401 67.14 0 410429..412729 - 766 77462366 - RSP_1821 - molybdopterin-containing oxidoreductase, formate dehydrogenase 402 70.49 0 412976..414520 + 514 77462367 - RSP_1822 - NH(3)-dependent NAD(+) synthetase 403 71.79 0 414543..415088 - 181 77462368 mogA RSP_1823 - molybdenum cofactor biosynthesis protein 404 73.07 +1 415379..416503 + 374 77462369 adh RSP_1824 - Zinc-containing alcohol dehydrogenase 405 69.83 0 416542..417963 - 473 77462370 tldD RSP_1825 - microcin-processing peptidase 2 406 66.56 0 418133..419044 + 303 77462371 coxII RSP_1826 - cytochrome c oxidase polypeptide II precursor (cytochrome AA3 subunit 2) 407 67.63 0 419115..420047 + 310 77462372 cox10 RSP_1827 - protoheme IX farnesyltransferase 408 70.62 0 420049..420225 + 58 77462373 - RSP_6021 - hypothetical protein 409 68.40 0 420222..420797 + 191 77462374 cox11 RSP_1828 - cytochrome C oxidase assembly protein 410 63.80 -1 420825..421625 + 266 77462375 coxIII RSP_1829 - cytochrome c oxidase, aa3-type, subunit III 411 70.24 0 421826..422497 + 223 77462376 surf-1 RSP_1830 - Surf1 protein 412 69.26 0 422509..423894 + 461 77462377 thrC RSP_1831 - threonine synthase 413 69.44 0 423891..425150 + 419 77462378 - RSP_1832 - M16 family peptidase 414 71.28 0 425150..425734 + 194 77462379 - RSP_1833 - putative ribosomal-protein-alanine acetyltransferase 415 69.02 0 426069..426875 + 268 77462380 - RSP_1834 - hypothetical protein 416 73.21 +1 426908..428329 + 473 77462381 - RSP_1835 - putative FAD dependent oxidoreductase 417 67.97 0 428458..428994 - 178 77462382 apt RSP_1836 - adenine phosphoribosyltransferase 418 69.99 0 428999..429871 - 290 77462383 - RSP_1837 - 5'-methylthioadenosine phosphorylase 419 69.23 0 430176..430760 - 194 77462384 - RSP_1838 - hypothetical protein 420 72.22 0 430841..431326 + 161 77462385 - RSP_1839 - GNAT family acetyltransferase 421 73.20 +1 431545..432309 + 254 77462386 - RSP_1840 - hypothetical protein 422 63.35 -1 432357..432959 - 200 77462387 - RSP_1841 - intracellular septation protein 423 69.43 0 432971..433876 - 301 77462388 - RSP_1842 - drug/metabolite exporter (DME) family protein 424 71.24 0 433992..435173 - 393 77462389 ftsY RSP_1843 - Signal recognition particle-docking protein FtsY 425 68.92 0 435329..435727 + 132 77462390 - RSP_1844 - hypothetical protein 426 74.42 +1 435848..437407 - 519 77462391 xseA RSP_1845 - exodeoxyribonuclease VII large subunit 427 70.06 0 437638..437991 - 117 77462392 - RSP_1846 - hypothetical protein 428 72.13 0 438151..439413 + 420 77462393 PurD RSP_1847 - phosphoribosylamine--glycine ligase 429 72.04 0 439615..441141 - 508 77462394 - RSP_1848 - pyruvate kinase 430 64.44 -1 441351..442610 + 419 77462395 - RSP_1849 - aspartate kinase 431 68.72 0 442635..444878 + 747 77462396 ptsI RSP_1850 - phosphoenolpyruvate-protein phosphotransferase, PtsI(Ntr) 432 67.33 0 445037..446251 + 404 77462397 metZ RSP_1851 - O-succinylhomoserine sulfhydrylase 433 66.11 0 446347..447426 + 359 77462398 - RSP_1852 - putative GTP cyclohydrolase 434 67.84 0 447477..448925 + 482 77462399 TrkH2 RSP_1853 - potassium uptake transporter, transmembrane component, TrkH 435 67.35 0 448968..450422 + 484 77462400 trkH3 RSP_1854 - potassium uptake transporter, transmembrane component, TrkH 436 73.91 +1 450492..452273 - 593 77462401 - RSP_1855 - hypothetical protein 437 64.94 0 452398..453321 + 307 77462402 glyQ RSP_1856 - glycyl-tRNA synthetase subunit alpha 438 67.52 0 453318..453788 + 156 77462403 - RSP_1857 - hypothetical protein 439 69.48 0 453792..455885 + 697 77462404 glyS RSP_1858 - glycyl-tRNA synthetase subunit beta 440 71.50 0 456004..458550 + 848 77462405 ppdK RSP_1859 - pyruvate phosphate dikinase 441 72.34 0 458768..459490 + 240 77462406 - RSP_1860 - hypothetical protein 442 72.09 0 459590..460492 + 300 77462407 - RSP_1861 - dihydroneopterin aldolase 443 73.31 +1 460538..461575 + 345 77462408 - RSP_1862 - dihydropteroate synthase 444 71.28 0 461572..462915 + 447 77462409 - RSP_1863 - phosphoglucosamine mutase 445 67.58 0 463014..463232 + 72 77462410 - RSP_1864 - hypothetical protein 446 63.64 -1 463305..464327 - 340 77462411 - RSP_1865 - ketol-acid reductoisomerase 447 69.30 0 464457..464912 + 151 77462412 - RSP_1866 - AsnC family transcriptional regulator 448 72.11 0 464909..465367 + 152 77462413 - RSP_1867 - AsnC family transcriptional regulator 449 70.74 0 465545..466672 + 375 77462414 - RSP_1868 - serine-pyruvate aminotransferase 450 72.17 0 466677..467876 - 399 77462415 - RSP_1869 - 2-octaprenyl-6-methoxyphenyl hydroxylase 451 63.64 -1 467928..468158 - 76 77462416 - RSP_6022 - hypothetical protein 452 68.36 0 468239..468886 - 215 77462417 - RSP_1870 - hydrolase 453 69.97 0 469002..469637 + 211 77462418 - RSP_1871 - GntR family transcriptional regulator 454 72.12 0 469645..471459 - 604 77462419 - RSP_1872 - glycosyl transferase family protein 455 69.61 0 471693..472574 - 293 77462420 - RSP_1873 - hypothetical protein 456 69.85 0 472656..473819 - 387 77462421 carA RSP_1874 - carbamoyl phosphate synthase small subunit 457 67.97 0 473997..474455 + 152 77462422 - RSP_1875 - hypothetical protein 458 71.00 0 474764..475294 - 176 77462423 - RSP_1876 - hypothetical protein 459 63.32 -1 475308..477008 - 566 77462424 coxI RSP_1877 - cytochrome c oxidase, aa3 type, subunit I 460 70.47 0 477423..478079 - 218 77462425 lipB RSP_1878 - lipoyltransferase 461 72.44 0 478176..479735 + 519 77462426 - RSP_1880 - hypothetical protein 462 65.31 0 480233..481336 + 367 77462427 - RSP_1882 - ABC polyamine/opine transporter, ATPase subunit 463 65.11 0 481391..482482 + 363 77462428 - RSP_1883 - ABC polyamine/opine transporter, periplasmic substrate-binding protein 464 68.24 0 482534..483808 + 424 77462429 - RSP_1884 - ABC polyamine/opine transporter, inner membrane subunit 465 65.79 0 483887..484795 + 302 77462430 - RSP_1886 - ABC polyamine/opine transporter, inner membrane subunit 466 57.14 -2 484975..485142 + 55 77462431 rpmG RSP_1887 - 50S ribosomal protein L33 467 74.07 +1 485217..485702 + 161 77462432 - RSP_1888 - acetyltransferase 468 63.56 -1 485753..486493 - 246 77462433 - RSP_1889 - hypothetical protein 469 74.46 +1 486624..486854 - 76 77462434 - RSP_6024 - hypothetical protein 470 69.35 0 486939..487907 + 322 77462435 - RSP_1890 - LysR family transcriptional regulator 471 73.12 +1 487915..488874 - 319 77462436 - RSP_1891 - Zinc-binding dehydrogenase 472 64.19 -1 489235..489597 + 120 77462437 - RSP_1892 - XRE family transcriptional regulator 473 70.91 0 489686..490486 + 266 77462438 - RSP_1893 - inositol monophosphatase family protein 474 67.18 0 490925..491314 + 129 77462439 - RSP_1894 - hypothetical protein 475 69.33 0 491614..493977 + 787 77462440 - RSP_1895 - small-conductance mechanosensitive ion channel 476 70.81 0 494021..495322 - 433 77462441 - RSP_1896 - guanine deaminase 477 68.91 0 495484..496818 + 444 77462442 mgtE RSP_1897 - Mg/Co/Ni transporter, MgtE 478 73.69 +1 496815..497369 + 184 77462443 - RSP_1898 - putative 5-formyltetrahydrofolate cyclo-ligase 479 64.53 -1 497371..498681 - 436 77462444 - RSP_1899 - ATPase 480 69.64 0 498697..499200 - 167 77462445 - RSP_1900 - hypothetical protein 481 68.20 0 499203..500051 - 282 77462446 - RSP_1901 - TPR repeat-containing protein 482 71.08 0 500089..500655 - 188 77462447 - RSP_1902 - TPR repeat-containing protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.