version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 346 70.46 0 350457..351194 + 245 77462311 - RSP_1767 - N-formylglutamate amidohydrolase 347 66.09 0 351538..352398 - 286 77462312 - RSP_1768 - branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase 348 70.92 0 352401..353363 - 320 77462313 - RSP_1769 - mandelate racemase/muconate lactonizing protein 349 68.26 0 353474..354475 - 333 77462314 - RSP_1770 - hypothetical protein 350 65.94 0 354743..355699 + 318 77462315 - RSP_1771 - beta subunit of citrate lyase 351 67.52 0 355790..356260 - 156 77462316 - RSP_6018 - hypothetical protein 352 66.77 0 356475..357434 + 319 77462317 accA RSP_1772 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 353 69.21 0 357431..357745 + 104 77462318 - RSP_1773 - DMT superfamily multidrug efflux pump 354 70.57 0 357884..359062 + 392 77462319 - RSP_1774 - putative glucose dehydrogenase B 355 70.94 0 359087..360046 - 319 77462320 - RSP_1775 - hypothetical protein 356 65.82 0 360057..360527 - 156 77462321 greA RSP_1776 - transcription elongation factor greA 357 65.04 0 360800..362455 + 551 77462322 - RSP_1777 - putative electron transfer flavoprotein-ubiquinone oxidoreductase precursor 358 67.76 0 362979..364256 + 425 77462323 - RSP_1778 - TPR domain-containing protein 359 74.19 +1 364249..365085 + 278 77462324 ispE RSP_1779 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 360 73.25 +1 365227..365712 + 161 77462325 - RSP_1780 - hypothetical protein 361 70.99 0 365720..367177 - 485 77462326 - RSP_1781 - putative membrane-anchored oxidoreductase, L-sorbosone dehydrogenase 362 69.52 0 367170..367625 - 151 77462327 - RSP_1782 - hypothetical protein 363 71.51 0 367772..368866 + 364 77462328 - RSP_1783 - hypothetical protein 364 68.27 0 368894..369268 - 124 77462329 - RSP_1784 - response regulator receiver domain-containing protein 365 72.84 0 369641..370645 - 334 77462330 - RSP_1785 - LacI family transcription regulator 366 72.82 0 370813..373329 + 838 77462331 fruB RSP_1786 - phosphoenolpyruvate--protein phosphotransferase 367 74.87 +1 373326..374312 + 328 77462332 fruK RSP_1787 - 1-phosphofructokinase 368 72.16 0 374309..376054 + 581 77462333 fruA RSP_1788 - PTS system fructose-specific II BC component 369 75.23 +1 376158..376484 - 108 77462334 - RSP_1789 - hypothetical protein 370 71.36 0 376484..376909 - 141 77462335 - RSP_1790 - transcriptional regulator 371 74.40 +1 376993..379215 + 740 77462336 - RSP_1791 - heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase 372 69.92 0 379339..379860 - 173 77462337 - RSP_1793 - single-strand DNA binding protein 373 65.85 0 380074..380688 + 204 77462338 - RSP_1794 - putative lytic transglycosylase 374 68.99 0 380801..382093 - 430 77462339 serS RSP_1795 - seryl-tRNA synthetase 375 68.82 0 382200..382757 - 185 77462340 sodC RSP_1796 - putative copper/Zinc superoxide dismutase 376 59.63 -2 383049..383375 + 108 77462341 YajC RSP_1797 - protein translocase subunit yajC 377 68.59 0 383391..385055 + 554 77462342 secD RSP_1798 - preprotein translocase subunit SecD 378 63.90 -1 385065..386039 + 324 77462343 secF RSP_1799 - preprotein translocase subunit SecF 379 71.47 0 386215..386568 + 117 77462344 - RSP_1800 - hypothetical protein 380 73.30 +1 386636..387268 + 210 77462345 ccmA RSP_1801 - cytochrome c biogenesis protein CcmA 381 71.23 0 387265..387921 + 218 77462346 ccmB RSP_1802 - ABC heme exporter, inner membrane subunit CcmB 382 66.26 0 387970..388698 + 242 77462347 ccmC RSP_1803 - ABC heme exporter, inner membrane subunit CcmC 383 69.75 0 388695..388856 + 53 77462348 ccmD RSP_1804 - Heme exporter protein D 384 70.19 0 388849..389388 + 179 77462349 ccmG RSP_1805 - thiol-disulfide interchange protein 385 66.07 0 389587..392271 - 894 161723329 - RSP_1806 - aconitate hydratase 386 70.48 0 392493..393200 + 235 77462351 - RSP_1807 - hypothetical protein 387 76.39 +1 393375..394433 - 352 77462352 - RSP_6019 - hypothetical protein 388 65.83 0 394430..395503 - 357 77462353 trpS RSP_1808 - tryptophanyl-tRNA synthetase 389 70.43 0 396284..397825 - 513 77462354 mviN RSP_1810 - putative virulence factor, MviN 390 68.13 0 397822..400614 - 930 77462355 glnD RSP_1811 - PII uridylyl-transferase 391 72.11 0 400598..401773 - 391 77462356 - RSP_1812 - hypothetical protein 392 73.20 +1 401856..402743 + 295 77462357 - RSP_1813 - hypothetical protein 393 71.19 0 402740..403093 + 117 77462358 - RSP_1814 - hypothetical protein 394 65.93 0 403146..404096 + 316 77462359 gshB RSP_1815 - glutathione synthetase 395 73.03 +1 404461..405999 - 512 77462360 - RSP_1816 - Mg chelatase-related protein 396 70.89 0 406088..406324 - 78 77462361 - RSP_1817 - hypothetical protein 397 69.61 0 406331..408643 - 770 77462362 feoB RSP_1818 - Fe2+ transport system protein B 398 71.67 0 408640..408879 - 79 77462363 feoA1 RSP_1819 - ferrous iron transport protein A 399 67.07 0 408886..409134 - 82 77462364 feoA2 RSP_6020 - ferrous iron transport protein A 400 64.51 -1 409736..410245 - 169 77462365 - RSP_1820 - hypothetical protein 401 67.14 0 410429..412729 - 766 77462366 - RSP_1821 - molybdopterin-containing oxidoreductase, formate dehydrogenase 402 70.49 0 412976..414520 + 514 77462367 - RSP_1822 - NH(3)-dependent NAD(+) synthetase 403 71.79 0 414543..415088 - 181 77462368 mogA RSP_1823 - molybdenum cofactor biosynthesis protein 404 73.07 +1 415379..416503 + 374 77462369 adh RSP_1824 - Zinc-containing alcohol dehydrogenase 405 69.83 0 416542..417963 - 473 77462370 tldD RSP_1825 - microcin-processing peptidase 2 406 66.56 0 418133..419044 + 303 77462371 coxII RSP_1826 - cytochrome c oxidase polypeptide II precursor (cytochrome AA3 subunit 2) 407 67.63 0 419115..420047 + 310 77462372 cox10 RSP_1827 - protoheme IX farnesyltransferase 408 70.62 0 420049..420225 + 58 77462373 - RSP_6021 - hypothetical protein 409 68.40 0 420222..420797 + 191 77462374 cox11 RSP_1828 - cytochrome C oxidase assembly protein 410 63.80 -1 420825..421625 + 266 77462375 coxIII RSP_1829 - cytochrome c oxidase, aa3-type, subunit III 411 70.24 0 421826..422497 + 223 77462376 surf-1 RSP_1830 - Surf1 protein 412 69.26 0 422509..423894 + 461 77462377 thrC RSP_1831 - threonine synthase 413 69.44 0 423891..425150 + 419 77462378 - RSP_1832 - M16 family peptidase 414 71.28 0 425150..425734 + 194 77462379 - RSP_1833 - putative ribosomal-protein-alanine acetyltransferase 415 69.02 0 426069..426875 + 268 77462380 - RSP_1834 - hypothetical protein 416 73.21 +1 426908..428329 + 473 77462381 - RSP_1835 - putative FAD dependent oxidoreductase 417 67.97 0 428458..428994 - 178 77462382 apt RSP_1836 - adenine phosphoribosyltransferase 418 69.99 0 428999..429871 - 290 77462383 - RSP_1837 - 5'-methylthioadenosine phosphorylase 419 69.23 0 430176..430760 - 194 77462384 - RSP_1838 - hypothetical protein 420 72.22 0 430841..431326 + 161 77462385 - RSP_1839 - GNAT family acetyltransferase 421 73.20 +1 431545..432309 + 254 77462386 - RSP_1840 - hypothetical protein 422 63.35 -1 432357..432959 - 200 77462387 - RSP_1841 - intracellular septation protein 423 69.43 0 432971..433876 - 301 77462388 - RSP_1842 - drug/metabolite exporter (DME) family protein 424 71.24 0 433992..435173 - 393 77462389 ftsY RSP_1843 - Signal recognition particle-docking protein FtsY 425 68.92 0 435329..435727 + 132 77462390 - RSP_1844 - hypothetical protein 426 74.42 +1 435848..437407 - 519 77462391 xseA RSP_1845 - exodeoxyribonuclease VII large subunit 427 70.06 0 437638..437991 - 117 77462392 - RSP_1846 - hypothetical protein 428 72.13 0 438151..439413 + 420 77462393 PurD RSP_1847 - phosphoribosylamine--glycine ligase 429 72.04 0 439615..441141 - 508 77462394 - RSP_1848 - pyruvate kinase 430 64.44 -1 441351..442610 + 419 77462395 - RSP_1849 - aspartate kinase 431 68.72 0 442635..444878 + 747 77462396 ptsI RSP_1850 - phosphoenolpyruvate-protein phosphotransferase, PtsI(Ntr) 432 67.33 0 445037..446251 + 404 77462397 metZ RSP_1851 - O-succinylhomoserine sulfhydrylase 433 66.11 0 446347..447426 + 359 77462398 - RSP_1852 - putative GTP cyclohydrolase 434 67.84 0 447477..448925 + 482 77462399 TrkH2 RSP_1853 - potassium uptake transporter, transmembrane component, TrkH 435 67.35 0 448968..450422 + 484 77462400 trkH3 RSP_1854 - potassium uptake transporter, transmembrane component, TrkH 436 73.91 +1 450492..452273 - 593 77462401 - RSP_1855 - hypothetical protein 437 64.94 0 452398..453321 + 307 77462402 glyQ RSP_1856 - glycyl-tRNA synthetase subunit alpha 438 67.52 0 453318..453788 + 156 77462403 - RSP_1857 - hypothetical protein 439 69.48 0 453792..455885 + 697 77462404 glyS RSP_1858 - glycyl-tRNA synthetase subunit beta 440 71.50 0 456004..458550 + 848 77462405 ppdK RSP_1859 - pyruvate phosphate dikinase 441 72.34 0 458768..459490 + 240 77462406 - RSP_1860 - hypothetical protein 442 72.09 0 459590..460492 + 300 77462407 - RSP_1861 - dihydroneopterin aldolase 443 73.31 +1 460538..461575 + 345 77462408 - RSP_1862 - dihydropteroate synthase 444 71.28 0 461572..462915 + 447 77462409 - RSP_1863 - phosphoglucosamine mutase 445 67.58 0 463014..463232 + 72 77462410 - RSP_1864 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0