version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 319 67.14 0 321841..322260 + 139 77462284 rplQ RSP_1740 - 50S ribosomal protein L17 320 61.27 -1 322519..323130 + 203 77462285 - RSP_1741 - LuxR family protein 321 70.56 0 323186..324571 + 461 77462286 - RSP_1742 - serine protease 322 69.10 0 324610..325923 + 437 77462287 - RSP_1743 - recombination factor protein RarA 323 67.20 0 325955..326329 + 124 77462288 - RSP_1744 - camphor resistance protein CrcB 324 67.82 0 326326..327366 + 346 77462289 - RSP_1745 - ribosomal large subunit pseudouridine synthase C 325 70.48 0 327366..328073 + 235 77462290 - RSP_1746 - hypothetical protein 326 67.06 0 328300..329316 + 338 77462291 bztA RSP_1747 - ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein 327 65.16 0 329465..330727 + 420 77462292 bztB RSP_1748 - ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB 328 67.27 0 330729..332057 + 442 77462293 bztC RSP_1749 - ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC 329 62.48 -1 332070..332858 + 262 77462294 bztD RSP_1750 - ABC glutamate/glutamine/aspartate/asparagine transporter, ATPase subunit bztD 330 65.85 0 333068..333436 + 122 77462295 - RSP_1751 - putative 2Fe-2S ferredoxin protein 331 66.83 0 333745..334950 + 401 77462296 - RSP_1752 - putative creatinase 332 69.98 0 335207..337378 + 723 77462297 - RSP_1753 - hypothetical protein 333 69.01 0 337757..338566 + 269 77462298 - RSP_1754 - hypothetical protein 334 67.25 0 338612..338953 - 113 77462299 - RSP_1755 - hypothetical protein 335 70.38 0 339118..339951 + 277 77462300 panB RSP_1756 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 336 71.07 0 339951..340790 + 279 77462301 panC RSP_1757 - pantothenate synthetase 337 70.98 0 340889..342208 - 439 77462302 - RSP_1758 - succinyl-diaminopimelate desuccinylase 338 58.89 -2 342292..342561 + 89 77462303 - RSP_1759 - hypothetical protein 339 63.77 -1 342569..343225 + 218 77462304 - RSP_1760 - hypothetical protein 340 70.31 0 343336..345753 - 805 77462305 pheT RSP_1761 - phenylalanyl-tRNA synthetase subunit beta 341 66.53 0 346143..346859 - 238 77462306 - RSP_1762 - hypothetical protein 342 68.51 0 346893..347975 - 360 77462307 pheS RSP_1763 - phenylalanyl-tRNA synthetase, alpha subunit 343 66.94 0 348180..348542 - 120 77462308 rplT RSP_1764 - 50S ribosomal protein L20 344 61.19 -1 348555..348755 - 66 77462309 rpmI RSP_1765 - 50S ribosomal protein L35 345 70.06 0 348871..350316 - 481 77462310 pykA RSP_1766 - pyruvate kinase 346 70.46 0 350457..351194 + 245 77462311 - RSP_1767 - N-formylglutamate amidohydrolase 347 66.09 0 351538..352398 - 286 77462312 - RSP_1768 - branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase 348 70.92 0 352401..353363 - 320 77462313 - RSP_1769 - mandelate racemase/muconate lactonizing protein 349 68.26 0 353474..354475 - 333 77462314 - RSP_1770 - hypothetical protein 350 65.94 0 354743..355699 + 318 77462315 - RSP_1771 - beta subunit of citrate lyase 351 67.52 0 355790..356260 - 156 77462316 - RSP_6018 - hypothetical protein 352 66.77 0 356475..357434 + 319 77462317 accA RSP_1772 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 353 69.21 0 357431..357745 + 104 77462318 - RSP_1773 - DMT superfamily multidrug efflux pump 354 70.57 0 357884..359062 + 392 77462319 - RSP_1774 - putative glucose dehydrogenase B 355 70.94 0 359087..360046 - 319 77462320 - RSP_1775 - hypothetical protein 356 65.82 0 360057..360527 - 156 77462321 greA RSP_1776 - transcription elongation factor greA 357 65.04 0 360800..362455 + 551 77462322 - RSP_1777 - putative electron transfer flavoprotein-ubiquinone oxidoreductase precursor 358 67.76 0 362979..364256 + 425 77462323 - RSP_1778 - TPR domain-containing protein 359 74.19 +1 364249..365085 + 278 77462324 ispE RSP_1779 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 360 73.25 +1 365227..365712 + 161 77462325 - RSP_1780 - hypothetical protein 361 70.99 0 365720..367177 - 485 77462326 - RSP_1781 - putative membrane-anchored oxidoreductase, L-sorbosone dehydrogenase 362 69.52 0 367170..367625 - 151 77462327 - RSP_1782 - hypothetical protein 363 71.51 0 367772..368866 + 364 77462328 - RSP_1783 - hypothetical protein 364 68.27 0 368894..369268 - 124 77462329 - RSP_1784 - response regulator receiver domain-containing protein 365 72.84 0 369641..370645 - 334 77462330 - RSP_1785 - LacI family transcription regulator 366 72.82 0 370813..373329 + 838 77462331 fruB RSP_1786 - phosphoenolpyruvate--protein phosphotransferase 367 74.87 +1 373326..374312 + 328 77462332 fruK RSP_1787 - 1-phosphofructokinase 368 72.16 0 374309..376054 + 581 77462333 fruA RSP_1788 - PTS system fructose-specific II BC component 369 75.23 +1 376158..376484 - 108 77462334 - RSP_1789 - hypothetical protein 370 71.36 0 376484..376909 - 141 77462335 - RSP_1790 - transcriptional regulator 371 74.40 +1 376993..379215 + 740 77462336 - RSP_1791 - heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase 372 69.92 0 379339..379860 - 173 77462337 - RSP_1793 - single-strand DNA binding protein 373 65.85 0 380074..380688 + 204 77462338 - RSP_1794 - putative lytic transglycosylase 374 68.99 0 380801..382093 - 430 77462339 serS RSP_1795 - seryl-tRNA synthetase 375 68.82 0 382200..382757 - 185 77462340 sodC RSP_1796 - putative copper/Zinc superoxide dismutase 376 59.63 -2 383049..383375 + 108 77462341 YajC RSP_1797 - protein translocase subunit yajC 377 68.59 0 383391..385055 + 554 77462342 secD RSP_1798 - preprotein translocase subunit SecD 378 63.90 -1 385065..386039 + 324 77462343 secF RSP_1799 - preprotein translocase subunit SecF 379 71.47 0 386215..386568 + 117 77462344 - RSP_1800 - hypothetical protein 380 73.30 +1 386636..387268 + 210 77462345 ccmA RSP_1801 - cytochrome c biogenesis protein CcmA 381 71.23 0 387265..387921 + 218 77462346 ccmB RSP_1802 - ABC heme exporter, inner membrane subunit CcmB 382 66.26 0 387970..388698 + 242 77462347 ccmC RSP_1803 - ABC heme exporter, inner membrane subunit CcmC 383 69.75 0 388695..388856 + 53 77462348 ccmD RSP_1804 - Heme exporter protein D 384 70.19 0 388849..389388 + 179 77462349 ccmG RSP_1805 - thiol-disulfide interchange protein 385 66.07 0 389587..392271 - 894 161723329 - RSP_1806 - aconitate hydratase 386 70.48 0 392493..393200 + 235 77462351 - RSP_1807 - hypothetical protein 387 76.39 +1 393375..394433 - 352 77462352 - RSP_6019 - hypothetical protein 388 65.83 0 394430..395503 - 357 77462353 trpS RSP_1808 - tryptophanyl-tRNA synthetase 389 70.43 0 396284..397825 - 513 77462354 mviN RSP_1810 - putative virulence factor, MviN 390 68.13 0 397822..400614 - 930 77462355 glnD RSP_1811 - PII uridylyl-transferase 391 72.11 0 400598..401773 - 391 77462356 - RSP_1812 - hypothetical protein 392 73.20 +1 401856..402743 + 295 77462357 - RSP_1813 - hypothetical protein 393 71.19 0 402740..403093 + 117 77462358 - RSP_1814 - hypothetical protein 394 65.93 0 403146..404096 + 316 77462359 gshB RSP_1815 - glutathione synthetase 395 73.03 +1 404461..405999 - 512 77462360 - RSP_1816 - Mg chelatase-related protein 396 70.89 0 406088..406324 - 78 77462361 - RSP_1817 - hypothetical protein 397 69.61 0 406331..408643 - 770 77462362 feoB RSP_1818 - Fe2+ transport system protein B 398 71.67 0 408640..408879 - 79 77462363 feoA1 RSP_1819 - ferrous iron transport protein A 399 67.07 0 408886..409134 - 82 77462364 feoA2 RSP_6020 - ferrous iron transport protein A 400 64.51 -1 409736..410245 - 169 77462365 - RSP_1820 - hypothetical protein 401 67.14 0 410429..412729 - 766 77462366 - RSP_1821 - molybdopterin-containing oxidoreductase, formate dehydrogenase 402 70.49 0 412976..414520 + 514 77462367 - RSP_1822 - NH(3)-dependent NAD(+) synthetase 403 71.79 0 414543..415088 - 181 77462368 mogA RSP_1823 - molybdenum cofactor biosynthesis protein 404 73.07 +1 415379..416503 + 374 77462369 adh RSP_1824 - Zinc-containing alcohol dehydrogenase 405 69.83 0 416542..417963 - 473 77462370 tldD RSP_1825 - microcin-processing peptidase 2 406 66.56 0 418133..419044 + 303 77462371 coxII RSP_1826 - cytochrome c oxidase polypeptide II precursor (cytochrome AA3 subunit 2) 407 67.63 0 419115..420047 + 310 77462372 cox10 RSP_1827 - protoheme IX farnesyltransferase 408 70.62 0 420049..420225 + 58 77462373 - RSP_6021 - hypothetical protein 409 68.40 0 420222..420797 + 191 77462374 cox11 RSP_1828 - cytochrome C oxidase assembly protein 410 63.80 -1 420825..421625 + 266 77462375 coxIII RSP_1829 - cytochrome c oxidase, aa3-type, subunit III 411 70.24 0 421826..422497 + 223 77462376 surf-1 RSP_1830 - Surf1 protein 412 69.26 0 422509..423894 + 461 77462377 thrC RSP_1831 - threonine synthase 413 69.44 0 423891..425150 + 419 77462378 - RSP_1832 - M16 family peptidase 414 71.28 0 425150..425734 + 194 77462379 - RSP_1833 - putative ribosomal-protein-alanine acetyltransferase 415 69.02 0 426069..426875 + 268 77462380 - RSP_1834 - hypothetical protein 416 73.21 +1 426908..428329 + 473 77462381 - RSP_1835 - putative FAD dependent oxidoreductase 417 67.97 0 428458..428994 - 178 77462382 apt RSP_1836 - adenine phosphoribosyltransferase 418 69.99 0 428999..429871 - 290 77462383 - RSP_1837 - 5'-methylthioadenosine phosphorylase 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.