version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2901 69.88 0 3055890..3056822 - 310 77464866 - RSP_1289 - branched chain amino acid ABC transporter inner membrane protein 2902 70.76 0 3056819..3057697 - 292 77464867 - RSP_1290 - branched chain amino acid ABC transporter inner membrane protein 2903 67.60 0 3057700..3058980 - 426 77464868 - RSP_1291 - branched chain amino acid ABC transporter periplasmic substrate-binding protein 2904 73.90 +1 3059227..3059751 + 174 77464869 - RSP_6153 - hypothetical protein 2905 71.65 0 3059735..3061219 - 494 77464870 - RSP_1292 - putative aldehyde dehydrogenase 2906 71.21 0 3061216..3062250 - 344 77464871 - RSP_1293 - putative acyl-carrier protein 2907 70.38 0 3062247..3064430 - 727 77464872 - RSP_1294 - branched-chain alpha-keto acid dehydrogenase E1 component 2908 68.48 0 3064506..3065717 - 403 77464873 - RSP_1295 - putative acyl-CoA dehydrogenase 2909 73.77 +1 3065797..3066711 + 304 77464874 - RSP_1297 - LysR family transcriptional regulator 2910 73.72 +1 3066683..3067816 - 377 77464875 nagA RSP_1296 - N-acetylglucosamine 6-phosphate deacetylase 2911 70.54 0 3067938..3069872 + 644 77464876 - RSP_1299 - hypothetical protein 2912 67.41 0 3069900..3070838 + 312 77464877 - RSP_1300 - hypothetical protein 2913 70.14 0 3070840..3072510 + 556 77464878 - RSP_1301 - putative peptidase 2914 72.82 0 3072641..3073534 + 297 77464879 - RSP_6154 - hypothetical protein 2915 65.83 0 3073609..3074445 + 278 77464880 motB RSP_1302 - putative chemotaxis MotB protein 2916 65.02 0 3074540..3075937 + 465 77464881 flgE RSP_1303 - putative flagellar hook protein 2917 69.16 0 3075950..3077395 + 481 77464882 flgK RSP_1304 - flagellar hook-associated protein FlgK 2918 65.87 0 3077396..3078397 + 333 77464883 - RSP_1305 - putative flagellar hook-associated protein 2919 64.84 0 3078397..3079488 + 363 77464884 flgI RSP_1307 - flagellar basal body P-ring protein 2920 66.28 0 3079464..3082313 - 949 77464885 - RSP_1306 - PAS sensor Signal tranduction histidine kinase 2921 73.41 +1 3082377..3083459 + 360 77464886 - RSP_1308 - hypothetical protein 2922 67.36 0 3083450..3084169 - 239 77464887 fliP RSP_1309 - flagellar biosynthesis protein FliP 2923 68.16 0 3084166..3084432 - 88 77464888 - RSP_1310 - hypothetical protein 2924 69.37 0 3084425..3085015 - 196 77464889 fliH RSP_1311 - putative flagellar biosynthesis/type III secretory pathway protein 2925 70.57 0 3085015..3086601 - 528 161723324 fliF RSP_1312 - flagellar MS-ring protein 2926 67.89 0 3086713..3087201 + 162 77464891 - RSP_1313 - flagellar synthesis protein 2927 71.35 0 3087235..3087597 + 120 77464892 - RSP_1314 - hypothetical protein 2928 69.71 0 3087594..3088151 + 185 77464893 - RSP_1315 - hypothetical protein 2929 62.30 -1 3088208..3089077 + 289 77464894 motA RSP_1316 - flagellar motor protein MotA 2930 69.83 0 3089074..3091032 + 652 77464895 - RSP_1318 - hypothetical protein 2931 68.14 0 3091328..3092008 + 226 77464896 - RSP_1319 - invasion protein 2932 64.83 0 3092012..3094078 + 688 77464897 flhA RSP_1320 - flagellar biosynthesis protein FlhA 2933 64.75 0 3094075..3094857 + 260 77464898 fliR RSP_1321 - flagellar biosynthesis pathway, component FliR 2934 67.04 0 3094854..3095933 + 359 77464899 flhB RSP_1322 - flagellar biosynthesis protein FlhB 2935 69.09 0 3095930..3096259 + 109 77464900 - RSP_6155 - hypothetical protein 2936 66.32 0 3096291..3096578 - 95 77464901 - RSP_1323 - hypothetical protein 2937 67.78 0 3096809..3097528 - 239 77464902 flgH RSP_1324 - flagellar basal body L-ring protein 2938 73.57 +1 3097539..3097958 - 139 77464903 flgA RSP_1325 - flagellar basal body P-ring biosynthesis protein FlgA 2939 67.68 0 3097958..3098743 - 261 77464904 flgG RSP_1326 - flagellar basal body rod protein FlgG 2940 69.31 0 3098740..3099459 - 239 77464905 flgF RSP_1327 - flagellar basal body rod protein FlgF 2941 65.54 0 3099461..3099727 - 88 77464906 - RSP_1328 - flagellar biosynthetic protein FliQ 2942 66.67 0 3099727..3100017 - 96 77464907 fliE RSP_1329 - flagellar hook-basal body protein FliE 2943 66.15 0 3100031..3100417 - 128 77464908 flgC RSP_1330 - flagellar basal body rod protein FlgC 2944 67.45 0 3100414..3100797 - 127 77464909 flgB RSP_1331 - flagellar basal body rod protein FlgB 2945 70.86 0 3100881..3102191 + 436 77464910 - RSP_1332 - H+-transporting two-sector ATPase, alpha/beta subunit 2946 75.00 +1 3102195..3102518 - 107 77464911 - RSP_1333 - hypothetical protein 2947 67.03 0 3102508..3102786 - 92 77464912 - RSP_1334 - chemotactic signal-response protein CheL 2948 69.37 0 3102890..3105109 + 739 77464913 - RSP_1335 - hypothetical protein 2949 67.41 0 3105119..3105787 + 222 77464914 flgD RSP_1336 - flagellar basal body rod modification protein 2950 67.68 0 3105782..3107263 - 493 77464915 aarF RSP_1337 - 2-octaprenylphenol hydroxylase 2951 63.75 -1 3107313..3108065 - 250 77464916 ubiE RSP_1338 - 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase 2952 70.89 0 3108159..3109010 + 283 77464917 - RSP_1339 - formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase 2953 65.12 0 3109071..3109847 + 258 77464918 - RSP_1340 - short chain enoyl-CoA hydratase 2954 70.61 0 3109958..3110236 + 92 77464919 rpsT RSP_1341 - 30S ribosomal protein S20 2955 66.15 0 3110775..3112142 + 455 77464920 dnaA RSP_1342 - chromosomal replication initiation protein 2956 66.40 0 3112260..3113378 + 372 77464921 - RSP_1343 - DNA polymerase III subunit beta 2957 71.18 0 3113431..3114537 + 368 77464922 recF RSP_1344 - recombination protein F 2958 71.39 0 3114534..3114956 + 140 77464923 - RSP_1345 - hypothetical protein 2959 67.32 0 3115048..3117483 + 811 77464924 gyrB RSP_1346 - DNA gyrase subunit B 2960 69.07 0 3117440..3118729 - 429 77464925 - RSP_1348 - hypothetical protein 2961 67.32 0 3118819..3119895 + 358 77464926 - RSP_1349 - hypothetical protein 2962 69.52 0 3120103..3120978 - 291 77464927 serB RSP_1350 - phosphoserine phosphatase 2963 68.22 0 3121118..3122275 + 385 77464928 serC RSP_1351 - phosphoserine aminotransferase 2964 65.23 0 3122347..3123951 + 534 77464929 - RSP_1352 - D-3-phosphoglycerate dehydrogenase 2965 70.08 0 3124050..3124781 + 243 77464930 - RSP_1353 - hypothetical protein 2966 72.74 0 3124864..3126033 + 389 77464931 - RSP_1354 - beta-ketothiolase 2967 75.01 +1 3126043..3128067 - 674 77464932 - RSP_1355 - glycosyl transferase family protein 2968 72.12 0 3128064..3133490 - 1808 77464933 - RSP_1356 - hypothetical protein 2969 69.92 0 3133645..3136194 + 849 77464934 - RSP_1357 - cytoplasmic sensor hybrid histidine kinase 2970 71.83 0 3136348..3137121 - 257 77464935 - RSP_1358 - hypothetical protein 2971 71.80 0 3137121..3139166 - 681 77464936 recQ RSP_1359 - DEAD/DEAH box helicase 2972 58.50 -2 3139224..3139529 - 101 77464937 - RSP_1360 - hypothetical protein 2973 71.56 0 3139640..3140170 + 176 77464938 - RSP_1361 - hypothetical protein 2974 70.75 0 3140265..3141635 + 456 77464939 - RSP_1362 - major facilitator transporter 2975 71.07 0 3141632..3142516 + 294 77464940 mepA RSP_1363 - penicillin-insensitive murein endopeptidase 2976 70.89 0 3142528..3143379 + 283 77464941 - RSP_1364 - hypothetical protein 2977 67.15 0 3143461..3144087 + 208 77464942 - RSP_1365 - hypothetical protein 2978 72.07 0 3144367..3144792 + 141 77464943 - RSP_1366 - hypothetical protein 2979 65.89 0 3144801..3146093 - 430 77464944 - RSP_1367 - nicotinate phosphoribosyltransferase 2980 69.97 0 3146095..3146700 - 201 77464945 pncA RSP_1368 - pyrazinamidase/nicotinamidase 2981 69.35 0 3146893..3147675 + 260 77464946 - RSP_1369 - Short-chain dehydrogenase/reductase SDR 2982 73.48 +1 3147672..3148595 + 307 77464947 - RSP_1371 - 2-keto-3-deoxygalactonate kinase 2983 67.72 0 3148553..3150163 - 536 77464948 - RSP_1370 - alpha amylase domain-containing protein 2984 67.55 0 3150624..3151862 + 412 77464949 - RSP_1372 - major facilitator transporter 2985 72.29 0 3151955..3153127 + 390 77464950 - RSP_1373 - major facilitator transporter 2986 73.04 +1 3153176..3154210 + 344 77464951 lpsB RSP_1374 - putative lipopolysaccharide core biosynthesis mannosyltransferase protein 2987 72.09 0 3154207..3154833 + 208 77464952 - RSP_1375 - hypothetical protein 2988 63.83 -1 3154962..3155984 + 340 77464953 asd RSP_1376 - aspartate-semialdehyde dehydrogenase 2989 66.07 0 3156070..3156738 - 222 77464954 - RSP_1377 - carbonic anhydrase 2990 66.41 0 3156854..3157237 + 127 77464955 - RSP_1378 - hypothetical protein 2991 71.74 0 3157254..3158693 + 479 77464956 - RSP_1379 - cytosol aminopeptidase 2992 69.85 0 3158690..3159505 + 271 77464957 - RSP_1380 - hypothetical protein 2993 72.97 +1 3159612..3160832 - 406 77464958 - RSP_1381 - hypothetical protein 2994 67.35 0 3160847..3162025 - 392 77464959 - RSP_1382 - radical SAM superfamily protein 2995 67.61 0 3162164..3162694 - 176 77464960 - RSP_1383 - hypothetical protein 2996 72.02 0 3162861..3163850 + 329 77464961 - RSP_1384 - hypothetical protein 2997 72.14 0 3163866..3164705 - 279 77464962 - RSP_1385 - hypothetical protein 2998 67.07 0 3164840..3166318 + 492 77464963 - RSP_1387 - AMP nucleosidase 2999 67.01 0 3166447..3166734 + 95 77464964 - RSP_1388 - DNA-binding protein HU, form N 3000 71.32 0 3166804..3167685 + 293 77464965 - RSP_1390 - DMT family permease 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0