version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 238 71.72 0 251453..251848 + 131 77462203 - RSP_1659 - hypothetical protein 239 72.82 0 251971..253140 + 389 77462204 - RSP_1660 - ParB family protein 240 69.57 0 253514..253789 + 91 77462205 - RSP_1661 - hypothetical protein 241 68.31 0 253865..254107 + 80 77462206 - RSP_6015 - hypothetical protein 242 68.58 0 254119..255165 + 348 77462207 - RSP_1662 - integrase/recombinase 243 69.08 0 255570..256607 + 345 77462208 - RSP_1663 - LacI family transcription regulator 244 71.96 0 256614..257066 - 150 77462209 - RSP_1664 - hypothetical protein 245 71.59 0 257063..257671 - 202 77462210 - RSP_1665 - RhtB family transporter 246 68.44 0 257682..258641 - 319 77462211 LytB RSP_1666 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 247 61.26 -1 258792..259364 - 190 77462212 - RSP_1667 - hypothetical protein 248 66.48 0 259554..260090 + 178 77462213 FolK RSP_1668 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 249 64.69 0 260175..260528 + 117 77462214 rpoZ RSP_1669 - DNA-directed RNA polymerase subunit omega 250 65.68 0 260559..262676 + 705 77462215 spoT/relA RSP_1670 - RelA/SpoT family protein 251 68.65 0 262693..263349 + 218 77462216 - RSP_1671 - hypothetical protein 252 71.28 0 263386..264144 + 252 77462217 pdxJ RSP_1672 - pyridoxal phosphate biosynthetic protein PdxJ 253 70.29 0 264176..264589 + 137 77462218 acpS RSP_1673 - 4'-phosphopantetheinyl transferase 254 64.52 -1 264610..265449 + 279 77462219 - RSP_1674 - signal peptidase I 255 72.03 0 265446..266135 + 229 77462220 rnc RSP_1675 - RNAse III 256 68.96 0 266128..267042 + 304 77462221 era RSP_1676 - GTP-binding protein Era 257 72.92 0 267064..267399 + 111 77462222 - RSP_1677 - hypothetical protein 258 73.33 +1 267436..268155 + 239 77462223 recO RSP_1678 - DNA repair protein RecO 259 68.37 0 268195..269841 - 548 77462224 - RSP_1679 - acyl-CoA dehydrogenase 260 66.10 0 270577..272175 - 532 77462225 pckA RSP_1680 - phosphoenolpyruvate carboxykinase 261 64.39 -1 272514..273215 + 233 77462226 - RSP_1681 - two-component transcriptional regulator 262 70.39 0 273238..274956 + 572 77462227 - RSP_1682 - two-component sensor histidine kinase 263 71.10 0 274953..275381 + 142 77462228 - RSP_1683 - Hpr(Ser) kinase/phosphatase 264 67.00 0 275403..276311 + 302 77462229 - RSP_1684 - hypothetical protein 265 67.42 0 276308..276706 + 132 77462230 - RSP_1685 - PTS system, IIA component 266 65.93 0 276703..276972 + 89 77462231 - RSP_1686 - putative phosphocarrier HPr protein 267 69.58 0 277116..278213 + 365 77462232 - RSP_1688 - acyltransferase 268 64.61 -1 278180..279055 - 291 77462233 hbdA RSP_1687 - 3-hydroxybutyryl-CoA dehydrogenase 269 68.61 0 279224..280048 + 274 77462234 - RSP_1689 - hypothetical protein 270 69.69 0 280096..281022 - 308 77462235 etfA RSP_1690 - electron transfer flavoprotein subunit alpha 271 65.62 0 281022..281783 - 253 77462236 etfB RSP_1691 - electron transfer flavoprotein subunit beta 272 70.29 0 281914..282492 - 192 77462237 pduO RSP_1692 - ATP:cob(I)alamin adenosyltransferase 273 65.71 0 282492..282701 - 69 77462238 - RSP_6016 - hypothetical protein 274 70.59 0 282869..283684 - 271 77462239 - RSP_1694 - short-chain dehydrogenase/reductase 275 73.37 +1 283985..284566 - 193 77462240 - RSP_1695 - hypothetical protein 276 68.71 0 284679..286982 + 767 77462241 - RSP_1696 - DNA topoisomerase IV subunit A 277 66.50 0 287111..287716 + 201 77462242 - RSP_1697 - hypothetical protein 278 65.14 0 287817..288992 + 391 77462243 tufA RSP_1707 - elongation factor Tu 279 69.61 0 289160..289804 + 214 77462244 - RSP_1706 - putative acetyltransferase 280 64.62 -1 290047..290241 + 64 77462245 secE RSP_1705 - preprotein translocase subunit SecE 281 63.86 -1 290404..290937 + 177 77462246 - RSP_1704 - transcription antitermination protein nusG 282 63.80 -1 291030..291482 + 150 77462247 rplK RSP_1703 - 50S ribosomal protein L11 283 67.38 0 291486..292184 + 232 77462248 rplA RSP_1702 - 50S ribosomal protein L1 284 62.98 -1 292423..292938 + 171 77462249 rplJ RSP_1701 - 50S ribosomal protein L10 285 61.11 -1 293008..293385 + 125 77462250 rplL RSP_1700 - 50S ribosomal protein L7/L12 286 65.36 0 293630..297763 + 1377 77462251 rpoB RSP_1699 - DNA-directed RNA polymerase subunit beta 287 64.92 0 297845..302092 + 1415 77462252 rpoC RSP_1712 - DNA-directed RNA polymerase subunit beta' 288 70.23 0 302284..303210 + 308 77462253 - RSP_1711 - RhaT family protein 289 61.29 -1 303423..303794 + 123 77462254 rpsL RSP_1710 - 30S ribosomal protein S12 290 63.69 -1 303807..304277 + 156 77462255 rpsG RSP_1709 - 30S ribosomal protein S7 291 64.12 -1 304302..306419 + 705 77462256 fusA1 RSP_1708 - elongation factor G 292 64.80 0 306494..307669 + 391 77462257 tufA RSP_1714 - elongation factor Tu 293 61.81 -1 307742..308050 + 102 77462258 rpsJ RSP_1715 - 30S ribosomal protein S10 294 66.11 0 308064..308786 + 240 77462259 rplC RSP_1716 - 50S ribosomal protein L3 295 64.90 0 308776..309396 + 206 77462260 rplD RSP_1717 - 50S ribosomal protein L4 296 59.93 -2 309393..309689 + 98 77462261 rplW RSP_1718 - 50S ribosomal protein L23 297 67.86 0 309812..310651 + 279 77462262 rplB RSP_1719 - 50S ribosomal protein L2 298 58.06 -2 310655..310933 + 92 77462263 rpsS RSP_1720 - 30S ribosomal protein S19 299 61.15 -1 310937..311317 + 126 77462264 rplV RSP_1721 - 50S ribosomal protein L22 300 65.97 0 311317..312033 + 238 77462265 rpsC RSP_1722 - 30S ribosomal protein S3 301 66.91 0 312048..312461 + 137 77462266 rplP RSP_1723 - 50S ribosomal protein L16 302 67.63 0 312701..312907 + 68 77462267 rpmC RSP_1724 - 50S ribosomal protein L29 303 61.73 -1 312921..313163 + 80 77462268 rpsQ RSP_6017 - 30S ribosomal protein S17 304 62.60 -1 313237..313605 + 122 77462269 rplN RSP_1725 - 50S ribosomal protein L14 305 66.01 0 313605..313910 + 101 77462270 rplX RSP_1726 - 50S ribosomal protein L24 306 61.85 -1 313910..314470 + 186 77462271 rplE RSP_1727 - 50S ribosomal protein L5 307 61.44 -1 314490..314795 + 101 77462272 rpsN RSP_1728 - 30S ribosomal protein S14 308 64.91 0 314808..315206 + 132 77462273 rpsH RSP_1729 - 30S ribosomal protein S8 309 63.67 -1 315217..315750 + 177 77462274 rplF RSP_1730 - 50S ribosomal protein L6 310 65.83 0 315762..316121 + 119 77462275 rplR RSP_1731 - 50S ribosomal protein L18 311 67.20 0 316133..316696 + 187 77462276 rpsE RSP_1732 - 30S ribosomal protein S5 312 64.55 -1 316709..316897 + 62 77462277 rpmD RSP_1733 - 50S ribosomal protein L30 313 67.70 0 317054..317539 + 161 77462278 rplO RSP_1734 - 50S ribosomal protein L15 314 64.09 -1 317640..318998 + 452 77462279 secY RSP_1735 - preprotein translocase subunit SecY 315 67.74 0 319009..319662 + 217 77462280 adk RSP_1736 - adenylate kinase 316 64.50 -1 319837..320205 + 122 77462281 rpsM RSP_1737 - 30S ribosomal protein S13 317 65.90 0 320219..320608 + 129 77462282 rpsK RSP_1738 - 30S ribosomal protein S11 318 62.73 -1 320724..321740 + 338 77462283 rpoA RSP_1739 - DNA-directed RNA polymerase subunit alpha 319 67.14 0 321841..322260 + 139 77462284 rplQ RSP_1740 - 50S ribosomal protein L17 320 61.27 -1 322519..323130 + 203 77462285 - RSP_1741 - LuxR family protein 321 70.56 0 323186..324571 + 461 77462286 - RSP_1742 - serine protease 322 69.10 0 324610..325923 + 437 77462287 - RSP_1743 - recombination factor protein RarA 323 67.20 0 325955..326329 + 124 77462288 - RSP_1744 - camphor resistance protein CrcB 324 67.82 0 326326..327366 + 346 77462289 - RSP_1745 - ribosomal large subunit pseudouridine synthase C 325 70.48 0 327366..328073 + 235 77462290 - RSP_1746 - hypothetical protein 326 67.06 0 328300..329316 + 338 77462291 bztA RSP_1747 - ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein 327 65.16 0 329465..330727 + 420 77462292 bztB RSP_1748 - ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB 328 67.27 0 330729..332057 + 442 77462293 bztC RSP_1749 - ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC 329 62.48 -1 332070..332858 + 262 77462294 bztD RSP_1750 - ABC glutamate/glutamine/aspartate/asparagine transporter, ATPase subunit bztD 330 65.85 0 333068..333436 + 122 77462295 - RSP_1751 - putative 2Fe-2S ferredoxin protein 331 66.83 0 333745..334950 + 401 77462296 - RSP_1752 - putative creatinase 332 69.98 0 335207..337378 + 723 77462297 - RSP_1753 - hypothetical protein 333 69.01 0 337757..338566 + 269 77462298 - RSP_1754 - hypothetical protein 334 67.25 0 338612..338953 - 113 77462299 - RSP_1755 - hypothetical protein 335 70.38 0 339118..339951 + 277 77462300 panB RSP_1756 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 336 71.07 0 339951..340790 + 279 77462301 panC RSP_1757 - pantothenate synthetase 337 70.98 0 340889..342208 - 439 77462302 - RSP_1758 - succinyl-diaminopimelate desuccinylase 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0