version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2642 72.00 0 2789923..2790147 + 74 77464607 - RSP_1026 - hypothetical protein 2643 67.12 0 2790207..2790425 + 72 77464608 - RSP_1027 - hypothetical protein 2644 67.73 0 2790472..2793285 + 937 77464609 - RSP_1028 - DNA polymerase I 2645 65.15 0 2793413..2793808 - 131 77464610 - RSP_1029 - histidine triad (HIT) protein 2646 68.68 0 2794267..2795259 - 330 77464611 - RSP_1030 - pfkB family carbohydrate kinase 2647 66.67 0 2795256..2795900 - 214 77464612 - RSP_1031 - DNA-(apurinic or apyrimidinic site) lyase / endonuclease III 2648 73.03 +1 2796013..2796861 + 282 77464613 - RSP_1032 - DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada 2649 71.03 0 2796976..2797662 + 228 77464614 - RSP_1033 - OmpA family protein 2650 67.19 0 2797903..2798670 + 255 77464615 pdhR RSP_1034 - GntR family transcriptional regulator 2651 69.33 0 2798882..2799445 - 187 77464616 atpF RSP_1035 - F0F1 ATP synthase subunit B 2652 67.40 0 2799442..2799984 - 180 77464617 atpX RSP_1036 - F0F1 ATP synthase subunit B' 2653 65.82 0 2800054..2800290 - 78 77464618 atpE RSP_1037 - F0F1 ATP synthase subunit C 2654 63.44 -1 2800343..2801086 - 247 77464619 atpB RSP_1038 - F0F1 ATP synthase subunit A 2655 64.88 0 2801132..2801467 - 111 77464620 atpI RSP_1039 - FoF1 ATP synthase, subunit I 2656 66.39 0 2801666..2802028 + 120 77464621 - RSP_1040 - ArsR family transcriptional regulator 2657 70.25 0 2802063..2803568 - 501 77464622 - RSP_1041 - malonyl-CoA synthase 2658 68.02 0 2803596..2804405 - 269 77464623 - RSP_1042 - hypothetical protein 2659 63.06 -1 2804602..2804823 - 73 77464624 rpmE RSP_1043 - 50S ribosomal protein L31 2660 64.27 -1 2804836..2805210 - 124 77464625 rplS RSP_1044 - 50S ribosomal protein L19 2661 69.41 0 2805259..2806095 - 278 77464626 trmD RSP_1045 - tRNA (Guanine37-N(1)-) methyltransferase 2662 75.20 +1 2806154..2807020 - 288 77464627 - RSP_1046 - hypothetical protein 2663 71.96 0 2807173..2807682 - 169 77464628 rimM RSP_1047 - 16S rRNA processing protein RimM 2664 67.52 0 2807783..2808133 - 116 77464629 rpsP RSP_1048 - 30S ribosomal protein S16 2665 63.33 -1 2808173..2808472 - 99 77464630 pheAa RSP_1049 - chorismate mutase 2666 74.51 +1 2808511..2809071 - 186 77464631 - RSP_1050 - acetyltransferase 2667 72.69 0 2809068..2809598 - 176 77464632 - RSP_1051 - hypothetical protein 2668 70.02 0 2809595..2810131 - 178 77464633 - RSP_1052 - acetyltransferase 2669 67.65 0 2810208..2811725 - 505 77464634 ffh RSP_1053 - signal recognition particle subunit FFH/SRP54 (srp54) 2670 69.66 0 2812006..2812506 - 166 77464635 - RSP_6230 - hypothetical protein 2671 69.14 0 2812669..2813598 + 309 77464636 - RSP_1055 - LysR family transcriptional regulator 2672 70.81 0 2814112..2815512 - 466 77464637 - RSP_1056 - periplasmic sensor signal transduction histidine kinase 2673 71.34 0 2815570..2816982 - 470 77464638 merA1 RSP_1057 - putative mercuric reductase protein 2674 70.92 0 2816983..2817711 - 242 77464639 - RSP_1058 - hypothetical protein 2675 70.37 0 2817892..2818026 + 44 77464640 rpmH RSP_1059 - 50S ribosomal protein L34P 2676 75.12 +1 2818049..2818462 + 137 77464641 rnpA RSP_1060 - ribonuclease P protein component 2677 74.12 +1 2818459..2818713 + 84 77464642 - RSP_1061 - hypothetical protein 2678 68.03 0 2818740..2819618 + 292 77464643 - RSP_1062 - PP family ATPase 2679 71.71 0 2819692..2821218 + 508 77464644 - RSP_1063 - diguanylate cyclase/phosphodiesterase 2680 65.92 0 2821328..2823199 + 623 77464645 - RSP_1064 - putative inner membrane protein translocase component YidC 2681 72.72 0 2823196..2823939 + 247 77464646 - RSP_1065 - hypothetical protein 2682 68.81 0 2823936..2824589 + 217 77464647 - RSP_1066 - GTPase EngB 2683 67.70 0 2824593..2825369 - 258 77464648 fixR RSP_1067 - Short-chain alcohol dehydrogenase 2684 68.59 0 2825457..2826338 + 293 77464649 argB RSP_1068 - acetylglutamate kinase 2685 74.11 +1 2826338..2826982 + 214 77464650 - RSP_1069 - hypothetical protein 2686 70.02 0 2826979..2827485 + 168 77464651 - RSP_1070 - hypothetical protein 2687 70.98 0 2827569..2828009 - 146 77464652 moaE RSP_1071 - molybdopterin synthase subunit MoaE 2688 69.08 0 2828011..2828259 - 82 77464653 moaD RSP_1072 - molybdopterin synthase subunit MoaD 2689 62.76 -1 2828256..2828921 - 221 77464654 pgsA RSP_1073 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2690 67.90 0 2829001..2830872 - 623 77464655 uvrC RSP_1074 - excinuclease ABC subunit C 2691 71.66 0 2831175..2831975 - 266 77464656 - RSP_1075 - short chain dehydrogenase 2692 68.80 0 2832130..2832927 - 265 77464657 sohB RSP_1076 - S49 family peptidase 2693 70.03 0 2833404..2834294 + 296 77464658 - RSP_1077 - LysR family transcriptional regulator 2694 71.31 0 2834395..2834868 + 157 77464659 fdsG RSP_1078 - formate dehydrogenase subunit gamma 2695 69.41 0 2834865..2836394 + 509 77464660 fdsB RSP_1079 - NAD dependent formate dehydrogenase, beta subunit (51 kDa) 2696 67.88 0 2836391..2839273 + 960 77464661 fdsA RSP_1080 - NAD-dependent formate dehydrogenase, alpha subunit 2697 71.81 0 2839270..2840085 + 271 77464662 fdsC RSP_1081 - formate dehydrogenase accessory protein 2698 66.22 0 2840075..2840296 + 73 77464663 fdsD RSP_1082 - formate dehydrogenase delta subunit 2699 64.29 -1 2840318..2840527 - 69 77464664 - RSP_6146 - hypothetical protein 2700 71.18 0 2840745..2841962 + 405 77464665 - RSP_1084 - putative glycosyl transferase, group 1 family protein 2701 70.37 0 2841944..2842645 - 233 77464666 - RSP_1083 - two component transcriptional regulator 2702 59.35 -2 2842663..2843277 - 204 77464667 - RSP_6231 - hypothetical protein 2703 66.67 0 2843493..2843738 + 81 77464668 - RSP_1085 - hypothetical protein 2704 73.67 +1 2843735..2844790 + 351 77464669 sdh RSP_1086 - saccharopine dehydrogenase (NAD+, L-lysine-forming) 2705 68.29 0 2844837..2845574 - 245 77464670 - RSP_1087 - short-chain dehydrogenase/reductase family protein 2706 67.91 0 2845571..2846131 - 186 77464671 - RSP_1088 - hypothetical protein 2707 72.64 0 2846135..2847340 - 401 77464672 - RSP_1089 - sugar/cation symporter 2708 70.93 0 2847337..2848086 - 249 77464673 - RSP_1090 - putative cyclopropane/cyclopropene fatty acid synthesis protein 2709 68.29 0 2848097..2849389 - 430 77464674 - RSP_1091 - putative cyclopropane/cyclopropene fatty acid synthesis protein, flavin amine oxidase 2710 66.48 0 2849604..2850149 + 181 77464675 rpoE RSP_1092 - RNA polymerase sigma factor RpoE 2711 72.43 0 2850158..2850799 + 213 77464676 chrR RSP_1093 - anti-sigma factor ChrR 2712 69.22 0 2850855..2851991 - 378 77464677 - RSP_1094 - hypothetical protein 2713 72.67 0 2852002..2853900 - 632 77464678 mutL RSP_1095 - DNA mismatch repair protein 2714 70.11 0 2853937..2855244 - 435 77464679 - RSP_1096 - putative zinc protease 2715 68.89 0 2855241..2856587 - 448 77464680 - RSP_1097 - putative zinc protease 2716 73.30 +1 2856667..2857194 - 175 77464681 - RSP_1098 - hypothetical protein 2717 68.46 0 2857248..2857805 - 185 77464682 LspA RSP_1099 - signal peptidase II 2718 70.19 0 2857807..2859396 - 529 77464683 purH RSP_1100 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2719 75.12 +1 2859434..2861137 - 567 77464684 - RSP_1101 - hypothetical protein 2720 75.43 +1 2861171..2862436 - 421 77464685 - RSP_6147 - rRNA methyltransferase RsmB-like 2721 69.31 0 2862457..2862645 + 62 77464686 - RSP_1104 - hypothetical protein 2722 72.72 0 2862858..2863667 - 269 77464687 DapB RSP_1105 - dihydrodipicolinate reductase 2723 67.85 0 2863905..2864327 + 140 77464688 rbfA RSP_1106 - ribosome-binding factor A 2724 69.65 0 2864317..2865054 + 245 77464689 - RSP_1107 - hypothetical protein 2725 70.75 0 2865122..2866027 + 301 77464690 truB RSP_1108 - tRNA pseudouridine synthase B 2726 68.52 0 2866248..2867324 + 358 77464691 cysK RSP_1109 - cysteine synthase 2727 69.01 0 2867723..2868235 + 170 77464692 - RSP_1110 - hypothetical protein 2728 63.33 -1 2868476..2868745 + 89 77464693 rpsO RSP_1111 - 30S ribosomal protein S15 2729 65.04 0 2868926..2871076 + 716 77464694 Pnp RSP_1112 - polynucleotide phosphorylase/polyadenylase 2730 70.40 0 2871399..2872712 - 437 77464695 - RSP_1113 - hemolysin-type calcium-binding region; RTX toxin 2731 68.92 0 2872932..2873774 + 280 77464696 - RSP_1114 - hemolysin-type calcium-binding toxin 2732 75.39 +1 2874093..2875880 + 595 77464697 - RSP_1115 - hypothetical protein 2733 71.66 0 2875880..2877121 + 413 77464698 - RSP_1116 - glycosyltransferase 2734 73.04 +1 2877118..2879298 + 726 77464699 - RSP_1117 - hypothetical protein 2735 67.45 0 2879295..2880572 + 425 77464700 - RSP_1118 - group 1 glycosyltransferase 2736 72.30 0 2880565..2882286 + 573 77464701 - RSP_1119 - ABC protein exporter, fused ATPase and inner membrane subunits 2737 71.04 0 2882283..2883584 + 433 77464702 - RSP_1120 - HlyD family protein secretion protein , membrane fusion protein 2738 68.28 0 2883654..2884460 + 268 77464703 - RSP_1121 - acetyl transferase 2739 70.24 0 2884464..2885051 + 195 77464704 - RSP_1122 - hypothetical protein 2740 67.66 0 2885063..2887885 - 940 77464705 DnaE RSP_1123 - DNA polymerase III, alpha subunit 2741 71.69 0 2887930..2889183 - 417 77464706 MltB RSP_1125 - membrane bound lytic murein transglycosylase B 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0