version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2433 70.37 0 2567790..2568167 + 125 77464398 - RSP_0822 - hypothetical protein 2434 68.13 0 2568235..2569530 - 431 77464399 SHMT RSP_0823 - serine hydroxymethyltransferase 2435 70.20 0 2569697..2570461 + 254 77464400 ppnK RSP_0825 - inorganic polyphosphate/ATP-NAD kinase 2436 70.06 0 2570458..2571135 - 225 77464401 pth RSP_0824 - peptidyl-tRNA hydrolase 2437 67.30 0 2571267..2571581 + 104 77464402 - RSP_0826 - hypothetical protein 2438 63.56 -1 2571882..2572493 - 203 77464403 - RSP_0827 - 50S ribosomal protein L25/general stress protein Ctc 2439 76.34 +1 2572791..2573948 + 385 77464404 - RSP_0828 - major facilitator transporter 2440 67.53 0 2573953..2575116 - 387 77464405 lctB RSP_0829 - lactate dehydrogenase 2441 74.39 +1 2575463..2576563 - 366 77464406 - RSP_0830 - CBS domain-containing protein 2442 70.83 0 2576608..2577399 - 263 77464407 trpA RSP_0831 - tryptophan synthase subunit alpha 2443 79.63 +2 2577453..2577668 - 71 77464408 thi RSP_6135 - thiamine biosynthetic protein 2444 69.03 0 2577892..2578989 + 365 77464409 - RSP_0832 - translation-associated GTPase 2445 70.79 0 2579330..2580784 + 484 77464410 xanB RSP_0834 - mannose-1-phosphate guanylyltransferase (GDP) 2446 71.31 0 2580781..2582157 + 458 77464411 manB RSP_0835 - phosphomannomutase 2447 71.03 0 2582403..2584784 + 793 77464412 - RSP_6136 - hypothetical protein 2448 75.23 +1 2584944..2586122 + 392 77464413 - RSP_0836 - putative flavoprotein 2449 67.24 0 2586097..2586792 - 231 77464414 - RSP_0837 - hypothetical protein 2450 71.80 0 2586898..2587890 - 330 77464415 - RSP_0838 - DNA polymerase III, delta subunit 2451 68.71 0 2587887..2588375 - 162 77464416 - RSP_0839 - secreted periplasmic protein 2452 67.41 0 2588362..2590905 - 847 77464417 leuS RSP_0840 - leucyl-tRNA synthetase 2453 71.77 0 2590937..2591563 - 208 77464418 - RSP_0841 - hypothetical protein 2454 64.25 -1 2591847..2592839 + 330 77464419 - RSP_0842 - putative porin 2455 78.10 +2 2592961..2594010 - 349 77464420 - RSP_6212 - hypothetical protein 2456 68.63 0 2594180..2595148 + 322 77464421 - RSP_0843 - hypothetical protein 2457 71.92 0 2595141..2595806 + 221 77464422 - RSP_0844 - hypothetical protein 2458 73.74 +1 2595826..2596320 - 164 77464423 - RSP_0845 - hypothetical protein 2459 72.08 0 2596317..2597405 - 362 77464424 ribA RSP_0846 - GTP cyclohydrolase II 2460 60.84 -1 2597558..2598244 + 228 77464425 - RSP_0847 - two component transcriptional regulator 2461 66.29 0 2598593..2599381 + 262 77464426 xthA1 RSP_0848 - exodeoxyribonuclease III 2462 70.19 0 2599412..2600035 - 207 77464427 - RSP_6137 - TetR family transcriptional regulator 2463 69.77 0 2600087..2600215 - 42 77464428 - RSP_6138 - hypothetical protein 2464 70.25 0 2600381..2601358 + 325 77464429 - RSP_0850 - hypothetical protein 2465 68.82 0 2601717..2602646 + 309 77464430 - RSP_0851 - AEC family transporter 2466 66.55 0 2602662..2603492 + 276 77464431 fghA RSP_0852 - S-formylglutathione hydrolase 2467 70.35 0 2603485..2603973 + 162 77464432 - RSP_0853 - hypothetical protein 2468 68.97 0 2603970..2604881 + 303 77464433 - RSP_0854 - ornithine cyclodeaminase 2469 74.57 +1 2604886..2605530 - 214 77464434 - RSP_0855 - hypothetical protein 2470 72.82 0 2605905..2607155 + 416 77464435 btaA RSP_0856 - S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase 2471 73.78 +1 2607152..2607784 + 210 77464436 btaB RSP_0857 - S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase 2472 67.82 0 2608190..2609143 - 317 77464437 - RSP_0858 - RhaT family transporter 2473 67.99 0 2609508..2610563 - 351 77464438 leuB RSP_0859 - 3-isopropylmalate dehydrogenase 2474 75.59 +1 2610714..2611643 - 309 77464439 - RSP_0860 - hypothetical protein 2475 69.16 0 2611724..2612647 - 307 77464440 - RSP_0861 - hypothetical protein 2476 62.38 -1 2612799..2613404 - 201 77464441 leuD RSP_0862 - isopropylmalate isomerase small subunit 2477 68.57 0 2613408..2613932 - 174 77464442 - RSP_6139 - hypothetical protein 2478 67.79 0 2613996..2615423 - 475 77464443 leuC RSP_0863 - isopropylmalate isomerase large subunit 2479 69.70 0 2615616..2616209 + 197 77464444 - RSP_0864 - hypothetical protein 2480 65.11 0 2616422..2616742 + 106 77464445 - RSP_0865 - hypothetical protein 2481 71.58 0 2616742..2617209 + 155 77464446 - RSP_0866 - hypothetical protein 2482 68.94 0 2617237..2617764 + 175 77464447 rnhA RSP_0867 - ribonuclease H 2483 75.41 +1 2617797..2618288 + 163 77464448 - RSP_0868 - putative transcriptional regulator 2484 63.64 -1 2618532..2618894 + 120 77464449 osp RSP_0869 - response regulator receive protein 2485 68.09 0 2619006..2619356 + 116 77464450 - RSP_0870 - hypothetical protein 2486 67.52 0 2619363..2620535 - 390 77464451 patB RSP_0871 - putative aminotransferase 2487 67.23 0 2620676..2621209 + 177 77464452 def1 RSP_0872 - peptide deformylase 2488 73.37 +1 2621209..2621700 + 163 77464453 - RSP_0873 - N-formylmethionyl tRNA deformylase 2489 66.27 0 2621697..2622200 + 167 77464454 - RSP_0874 - formylmethionine deformylase 2490 73.05 +1 2622204..2623112 + 302 77464455 fmt RSP_0875 - methionyl-tRNA formyltransferase 2491 74.54 +1 2623205..2626660 - 1151 77464456 - RSP_0876 - chromosome segregation protein SMC2 2492 73.05 +1 2626798..2627283 + 161 77464457 - RSP_0878 - putative acetyltransferase protein 2493 70.17 0 2627234..2628118 - 294 77464458 - RSP_0877 - RhaT family transporter 2494 73.53 +1 2628115..2628915 - 266 77464459 - RSP_0879 - hypothetical protein 2495 73.92 +1 2628970..2630031 + 353 77464460 dadA RSP_0880 - oxidoreductase 2496 74.82 +1 2630264..2632225 - 653 77464461 - RSP_0881 - putative soluble lytic transglycosylase 2497 68.69 0 2632363..2633250 + 295 77464462 dapA RSP_0882 - dihydrodipicolinate synthase 2498 63.50 -1 2633511..2633984 + 157 77464463 smpB RSP_0883 - SsrA-binding protein 2499 69.26 0 2634274..2635122 + 282 77464464 SseA RSP_0885 - thiosulfate sulfurtransferase, rhodanese-like 2500 69.11 0 2635130..2636314 + 394 77464465 TyrB RSP_0886 - aromatic amino acid aminotransferase 2501 66.15 0 2636500..2637852 - 450 77464466 amtB RSP_0888 - ammonium transporter 2502 63.72 -1 2637879..2638217 - 112 77464467 glnK RSP_0889 - nitrogen regulatory protein P-II 2503 69.91 0 2638379..2640874 + 831 77464468 MrcB RSP_0887 - glycosyl transferase family protein 2504 68.59 0 2640924..2641547 - 207 77464469 - RSP_0890 - hypothetical protein 2505 66.54 0 2641537..2642325 - 262 77464470 vacJ RSP_0891 - putative lipoprotein 2506 70.41 0 2642535..2644271 + 578 77464471 - RSP_0892 - protein toxin ABC transporter ATPase and inner membrane subunit 2507 68.82 0 2644268..2645569 + 433 77464472 - RSP_0893 - RTX secretion protein D 2508 70.37 0 2645693..2646151 + 152 77464473 - RSP_0894 - hypothetical protein 2509 74.19 +1 2646151..2646921 + 256 77464474 - RSP_0895 - phosphodiesterase-like 2510 71.00 0 2646991..2648235 + 414 77464475 - RSP_0896 - hypothetical protein 2511 70.14 0 2648232..2648864 + 210 77464476 - RSP_0897 - glutathione S-transferase 2512 67.38 0 2648857..2649135 + 92 77464477 DCOHM RSP_0898 - pterin-4-alpha-carbinolamine dehydratase 2513 68.92 0 2649289..2649777 - 162 77464478 - RSP_0899 - thiol peroxidase (atypical 2-Cys peroxiredoxin) 2514 72.89 0 2649878..2651083 + 401 77464479 - RSP_0900 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2515 73.15 +1 2651080..2651634 + 184 77464480 - RSP_0901 - N-6 adenine-specific DNA methylase 2516 71.78 0 2651631..2652275 + 214 77464481 - RSP_0902 - hydrolase, haloacid dehalogenase-like hydrolase 2517 70.46 0 2652348..2653427 + 359 77464482 - RSP_0903 - catalase 2518 69.35 0 2653510..2654403 + 297 77464483 sitA RSP_0904 - ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA 2519 71.03 0 2654400..2655293 + 297 77464484 sitB RSP_0905 - ABC Mn+2/Fe+2 transporter, ATPase subunit SitB 2520 67.60 0 2655280..2656140 + 286 77464485 sitC RSP_0906 - ABC Mn+2/Fe+2 transporter, inner membrane subunit SitC 2521 69.02 0 2656137..2656985 + 282 77464486 sitD RSP_0908 - ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD 2522 71.26 0 2656960..2657568 - 202 77464487 dctR RSP_0907 - two component LuxR family transcriptional regulator 2523 73.16 +1 2657565..2659550 - 661 77464488 dctS RSP_0909 - PAS/PAC sensor signal transduction histidine kinase 2524 65.47 0 2659690..2660694 + 334 77464489 dctP RSP_0910 - TRAP dicarboxylate family transporter DctP subunit 2525 65.50 0 2660780..2661463 + 227 77464490 dctQ RSP_0911 - TRAP dicarboxylate family transporter DctQ subunit 2526 65.91 0 2661465..2662790 + 441 77464491 dctM RSP_0912 - TRAP dicarboxylate family transporter DctM subunit 2527 74.07 +1 2662916..2663536 - 206 77464492 crt RSP_0913 - enoyl-CoA hydratase 2528 72.38 0 2663533..2664285 - 250 77464493 - RSP_0914 - Short-chain dehydrogenase/reductase SDR 2529 67.91 0 2664409..2665938 + 509 77464494 - RSP_0915 - hypothetical protein 2530 73.21 +1 2666209..2667552 + 447 77464495 pmbA RSP_0916 - microcin-processing peptidase 1 2531 72.59 0 2667539..2668315 + 258 77464496 - RSP_0917 - inositol monophosphatase 2532 65.66 0 2668563..2668760 - 65 77464497 - RSP_0918 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0