version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2365 66.88 0 2498062..2498529 - 155 77464330 nusB RSP_0755 - NusB antitermination factor 2366 69.65 0 2498532..2499068 - 178 77464331 ribH1 RSP_0756 - 6,7-dimethyl-8-ribityllumazine synthase 2367 67.30 0 2499072..2500175 - 367 77464332 ribBA RSP_0757 - GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase 2368 74.33 +1 2500488..2501048 - 186 77464333 - RSP_6130 - hypothetical protein 2369 68.17 0 2501050..2501646 - 198 77464334 - RSP_0758 - riboflavin synthase subunit alpha 2370 69.13 0 2501868..2503004 + 378 77464335 - RSP_0759 - putative capsule polysaccharide exporter 2371 61.76 -1 2503434..2503943 - 169 77464336 mucS RSP_0760 - MarR family transcriptional regulator 2372 68.89 0 2504021..2504290 - 89 77464337 - RSP_0761 - hypothetical protein 2373 69.67 0 2504287..2504685 - 132 77464338 - RSP_0762 - XRE family transcriptional regulator 2374 67.66 0 2504800..2506002 + 400 77464339 aatA RSP_0763 - aspartate aminotransferase 2375 69.62 0 2506086..2507441 - 451 77464340 - RSP_0764 - MATE family efflux pump NorM 2376 71.34 0 2507492..2508133 - 213 77464341 - RSP_0765 - SAM-dependent methyltransferase 2377 66.77 0 2508130..2509140 - 336 77464342 - RSP_0766 - hypothetical protein 2378 75.04 +1 2509378..2510082 - 234 77464343 - RSP_6131 - hypothetical protein 2379 75.16 +1 2510174..2511115 - 313 77464344 - RSP_0768 - LuxR family transcriptional regulator 2380 71.97 0 2511204..2511863 + 219 77464345 - RSP_0769 - glutathione S-transferase 2381 66.37 0 2511924..2513915 + 663 77464346 parE RSP_0772 - DNA topoisomerase IV subunit B 2382 70.35 0 2514134..2515354 - 406 77464347 - RSP_0773 - mannonate dehydratase 2383 71.19 0 2515853..2518174 - 773 77464348 - RSP_0774 - RNA binding protein 2384 69.52 0 2518258..2518677 - 139 77464349 - RSP_0775 - class I monoheme cytochrome c 2385 73.19 +1 2518706..2519380 - 224 77464350 LolD RSP_0776 - ABC lipoprotein efflux transporter, ATPase subunit, LolD 2386 68.53 0 2519373..2520659 - 428 77464351 LolE RSP_0777 - ABC lipoprotein efflux transporter, inner membrane subunit, LolE 2387 66.14 0 2520775..2522112 - 445 77464352 ProS RSP_0778 - prolyl-tRNA synthetase 2388 67.46 0 2522512..2523639 + 375 77464353 perM RSP_0779 - Lipocalin-related protein and Bos/Can/Equ allergen 2389 73.57 +1 2523636..2524316 + 226 77464354 - RSP_0780 - hypothetical protein 2390 67.40 0 2524376..2526562 + 728 77464355 - RSP_0781 - polyphosphate kinase 2391 69.65 0 2526699..2528240 + 513 77464356 - RSP_0782 - Ppx/GppA phosphatase 2392 73.96 +1 2528237..2528839 + 200 77464357 - RSP_0783 - hypothetical protein 2393 69.39 0 2528862..2529338 + 158 77464358 - RSP_0784 - GNAT family acetyltransferase 2394 70.61 0 2529370..2530053 + 227 77464359 - RSP_0785 - putative heat shock protein DnaJ 2395 68.04 0 2530054..2531073 + 339 77464360 - RSP_0786 - endonuclease/exonuclease/phosphatase fa 2396 72.42 0 2531589..2532005 + 138 77464361 - RSP_0787 - hypothetical protein 2397 78.54 +2 2532002..2532835 + 277 77464362 - RSP_0788 - hypothetical protein 2398 74.67 +1 2532845..2533819 + 324 77464363 cobC RSP_0789 - aminotransferase 2399 71.30 0 2533887..2535029 - 380 77464364 pqqE RSP_0790 - pyrroloquinoline quinone biosynthesis protein PqqE 2400 68.69 0 2535029..2535325 - 98 77464365 pqqD RSP_0791 - putative pyrroloquinoline quinone synthesis protein D 2401 67.97 0 2535322..2536089 - 255 77464366 pqqC RSP_0792 - pyrroloquinoline quinone biosynthesis protein PqqC 2402 71.76 0 2536086..2536988 - 300 77464367 pqqB RSP_0793 - pyrroloquinoline quinone biosynthesis protein PqqB 2403 56.79 -2 2537007..2537087 - 26 77464368 pqqA RSP_6132 - putative coenzyme PQQ synthesis protein A 2404 71.91 0 2537318..2538499 - 393 77464369 catR RSP_0794 - LysR family transcriptional regulator 2405 69.52 0 2538620..2539039 - 139 77464370 - RSP_0795 - hypothetical protein 2406 73.17 +1 2539186..2540631 + 481 77464371 cobQ RSP_0796 - cobyric acid synthase 2407 70.83 0 2540682..2541065 + 127 77464372 - RSP_6229 - hypothetical protein 2408 68.02 0 2541066..2542391 - 441 77464373 gltX RSP_0797 - glutamyl-tRNA synthetase 2409 67.15 0 2542704..2543114 + 136 77464374 - RSP_0798 - neutral zinc metallopeptidase 2410 70.22 0 2543202..2544131 + 309 77464375 - RSP_0799 - hypothetical protein 2411 74.42 +1 2544351..2544608 - 85 77464376 - RSP_0800 - hypothetical protein 2412 72.81 0 2544668..2545807 + 379 77464377 - RSP_0801 - deacetylase / acetylpolyamine aminohydrolase 2413 69.76 0 2546149..2547216 - 355 77464378 - RSP_0802 - dipeptidase AC 2414 71.03 0 2547213..2547968 - 251 77464379 DppF RSP_0803 - ABC dipeptide transporter, ATPase subunit DppF 2415 72.12 0 2547968..2548792 - 274 77464380 DppD RSP_0804 - ABC dipeptide transporter, ATPase subunit DppD 2416 71.32 0 2548893..2549795 - 300 77464381 DppC RSP_0805 - ABC dipeptide transporter, inner membrane subunit DppC 2417 68.25 0 2549792..2550862 - 356 77464382 DppB RSP_0806 - ABC dipeptide transporter, inner membrane subunit DppB 2418 64.01 -1 2550863..2552479 - 538 77464383 DdpA RSP_0807 - ABC dipeptide transporter, substrate-binding subunit DdpA 2419 72.88 0 2552780..2553358 + 192 77464384 - RSP_0809 - hypothetical protein 2420 67.10 0 2553355..2554047 + 230 77464385 - RSP_0810 - hypothetical protein 2421 68.44 0 2554062..2554343 - 93 77464386 - RSP_0811 - hypothetical protein 2422 67.65 0 2554340..2554744 - 134 77464387 - RSP_0812 - methylmalonyl-CoA epimerase 2423 74.93 +1 2555003..2555704 + 233 77464388 - RSP_0813 - response regulator receiver protein 2424 70.73 0 2555865..2556578 - 237 77464389 - RSP_0814 - acetyltransferase 2425 67.12 0 2556582..2558357 - 591 77464390 aspS RSP_0815 - aspartyl-tRNA synthetase 2426 75.73 +1 2558573..2559157 - 194 77464391 - RSP_0816 - hypothetical protein 2427 71.36 0 2559166..2560338 - 390 77464392 - RSP_0817 - para-aminobenzoate synthase component I 2428 67.99 0 2560500..2563829 + 1109 161723327 carB RSP_0818 - carbamoyl phosphate synthase large subunit 2429 70.85 0 2564430..2565815 + 461 77464394 rhlE2 RSP_0819 - DEAD/DEAH box helicase 2430 62.15 -1 2566177..2566353 + 58 77464395 - RSP_6134 - hypothetical protein 2431 67.25 0 2566383..2566892 + 169 77464396 - RSP_0820 - putative cytochrome B561 2432 70.82 0 2566932..2567702 - 256 77464397 - RSP_0821 - esterase/lipase/thioesterase 2433 70.37 0 2567790..2568167 + 125 77464398 - RSP_0822 - hypothetical protein 2434 68.13 0 2568235..2569530 - 431 77464399 SHMT RSP_0823 - serine hydroxymethyltransferase 2435 70.20 0 2569697..2570461 + 254 77464400 ppnK RSP_0825 - inorganic polyphosphate/ATP-NAD kinase 2436 70.06 0 2570458..2571135 - 225 77464401 pth RSP_0824 - peptidyl-tRNA hydrolase 2437 67.30 0 2571267..2571581 + 104 77464402 - RSP_0826 - hypothetical protein 2438 63.56 -1 2571882..2572493 - 203 77464403 - RSP_0827 - 50S ribosomal protein L25/general stress protein Ctc 2439 76.34 +1 2572791..2573948 + 385 77464404 - RSP_0828 - major facilitator transporter 2440 67.53 0 2573953..2575116 - 387 77464405 lctB RSP_0829 - lactate dehydrogenase 2441 74.39 +1 2575463..2576563 - 366 77464406 - RSP_0830 - CBS domain-containing protein 2442 70.83 0 2576608..2577399 - 263 77464407 trpA RSP_0831 - tryptophan synthase subunit alpha 2443 79.63 +2 2577453..2577668 - 71 77464408 thi RSP_6135 - thiamine biosynthetic protein 2444 69.03 0 2577892..2578989 + 365 77464409 - RSP_0832 - translation-associated GTPase 2445 70.79 0 2579330..2580784 + 484 77464410 xanB RSP_0834 - mannose-1-phosphate guanylyltransferase (GDP) 2446 71.31 0 2580781..2582157 + 458 77464411 manB RSP_0835 - phosphomannomutase 2447 71.03 0 2582403..2584784 + 793 77464412 - RSP_6136 - hypothetical protein 2448 75.23 +1 2584944..2586122 + 392 77464413 - RSP_0836 - putative flavoprotein 2449 67.24 0 2586097..2586792 - 231 77464414 - RSP_0837 - hypothetical protein 2450 71.80 0 2586898..2587890 - 330 77464415 - RSP_0838 - DNA polymerase III, delta subunit 2451 68.71 0 2587887..2588375 - 162 77464416 - RSP_0839 - secreted periplasmic protein 2452 67.41 0 2588362..2590905 - 847 77464417 leuS RSP_0840 - leucyl-tRNA synthetase 2453 71.77 0 2590937..2591563 - 208 77464418 - RSP_0841 - hypothetical protein 2454 64.25 -1 2591847..2592839 + 330 77464419 - RSP_0842 - putative porin 2455 78.10 +2 2592961..2594010 - 349 77464420 - RSP_6212 - hypothetical protein 2456 68.63 0 2594180..2595148 + 322 77464421 - RSP_0843 - hypothetical protein 2457 71.92 0 2595141..2595806 + 221 77464422 - RSP_0844 - hypothetical protein 2458 73.74 +1 2595826..2596320 - 164 77464423 - RSP_0845 - hypothetical protein 2459 72.08 0 2596317..2597405 - 362 77464424 ribA RSP_0846 - GTP cyclohydrolase II 2460 60.84 -1 2597558..2598244 + 228 77464425 - RSP_0847 - two component transcriptional regulator 2461 66.29 0 2598593..2599381 + 262 77464426 xthA1 RSP_0848 - exodeoxyribonuclease III 2462 70.19 0 2599412..2600035 - 207 77464427 - RSP_6137 - TetR family transcriptional regulator 2463 69.77 0 2600087..2600215 - 42 77464428 - RSP_6138 - hypothetical protein 2464 70.25 0 2600381..2601358 + 325 77464429 - RSP_0850 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0