version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2237 72.80 0 2367139..2368443 - 434 77464202 hisD RSP_0632 - histidinol dehydrogenase 2238 72.71 0 2368665..2369144 - 159 77464203 - RSP_6122 - hypothetical protein 2239 70.06 0 2369144..2370412 - 422 77464204 - RSP_0633 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2240 66.82 0 2371214..2372521 - 435 77464205 - RSP_0634 - TRAP dicarboxylate family transporter DctM subunit 2241 60.69 -1 2372531..2373049 - 172 77464206 - RSP_0635 - TRAP dicarboxylate family transporter DctQ subunit 2242 66.22 0 2373108..2374232 - 374 77464207 - RSP_0636 - TRAP dicarboxylate family transporter DctP subunit 2243 74.38 +1 2374319..2375044 - 241 77464208 - RSP_0637 - hypothetical protein 2244 72.93 0 2375041..2376333 - 430 77464209 - RSP_0638 - putative FAD dependent oxidoreductase protein 2245 68.34 0 2376335..2378011 - 558 77464210 - RSP_0639 - putative N-methylhydantoinase B 2246 70.58 0 2378015..2380033 - 672 77464211 - RSP_0640 - putative N-methylhydantoinase A 2247 68.40 0 2380273..2380908 + 211 77464212 - RSP_0641 - XRE family transcriptional regulator 2248 71.64 0 2380915..2381859 + 314 77464213 - RSP_0642 - RhaT family protein 2249 70.88 0 2382164..2384014 + 616 77464214 - RSP_0643 - periplasmic sensor signal transduction histidine kinase 2250 73.64 +1 2384018..2384734 - 238 77464215 - RSP_0644 - ABC transporter, inner membrane subunit 2251 76.21 +1 2384731..2385411 - 226 77464216 - RSP_0645 - ABC transporter, ATPase subunit 2252 69.02 0 2385411..2386346 - 311 77464217 - RSP_0646 - ABC transporter, substrate-binding protein 2253 72.76 0 2386343..2387146 - 267 77464218 thiD RSP_0647 - phosphomethylpyrimidine kinase 2254 75.65 +1 2387143..2387754 - 203 77464219 thiE RSP_0648 - thiamine-phosphate pyrophosphorylase 2255 73.38 +1 2387751..2388539 - 262 77464220 thiM RSP_0649 - putative hydoxyethylthiazole kinase 2256 66.89 0 2388918..2389370 - 150 77464221 - RSP_0650 - transglycosylase 2257 71.07 0 2389367..2390161 - 264 77464222 - RSP_0651 - putative inositol monophosphatase protein 2258 68.69 0 2390172..2391158 - 328 77464223 - RSP_0652 - UDP-galactose 4-epimerase 2259 66.67 0 2391168..2392472 - 434 77464224 - RSP_0653 - UDP-glucose 6-dehydrogenase 2260 70.29 0 2392540..2393451 - 303 77464225 - RSP_0654 - DMT family permease 2261 63.99 -1 2393628..2394374 - 248 77464226 - RSP_0655 - hypothetical protein 2262 67.45 0 2394469..2396247 - 592 77464227 - RSP_0656 - sodium/sulphate symporter 2263 69.26 0 2396360..2397169 - 269 77464228 - RSP_0657 - hypothetical protein 2264 71.96 0 2397254..2399653 + 799 77464229 - RSP_0658 - ATP-dependent helicase 2265 73.07 +1 2399759..2400445 + 228 77464230 - RSP_0659 - putative metallo-phosphoesterase 2266 72.36 0 2400409..2401128 - 239 77464231 - RSP_0660 - hypothetical protein 2267 70.48 0 2401243..2402133 - 296 77464232 - RSP_0661 - methenyltetrahydrofolate cyclohydrolase 2268 67.30 0 2402130..2402447 - 105 77464233 - RSP_0662 - chorismate mutase 2269 67.74 0 2402522..2404195 - 557 77464234 - RSP_0663 - formate--tetrahydrofolate ligase 2270 66.25 0 2404276..2405241 - 321 77464235 - RSP_0664 - hypothetical protein 2271 65.62 0 2405469..2407370 - 633 77464236 ftsH RSP_0665 - membrane protease FtsH catalytic subunit 2272 74.25 +1 2407449..2408687 - 412 77464237 - RSP_0666 - cell cycle protein 2273 72.73 0 2408687..2409511 - 274 77464238 - RSP_0667 - hypothetical protein 2274 69.58 0 2409516..2410064 - 182 77464239 - RSP_0668 - OmpA/MotB family protein 2275 70.64 0 2410149..2411483 - 444 77464240 tolB RSP_0669 - translocation protein TolB 2276 74.20 +1 2411553..2412800 - 415 77464241 - RSP_0670 - hypothetical protein 2277 68.79 0 2412811..2413281 - 156 77464242 - RSP_0671 - ExbD/TolR family protein 2278 66.09 0 2413285..2413983 - 232 77464243 TolQ RSP_0672 - biopolymer transport protein, TolQ 2279 68.92 0 2414110..2414508 - 132 77464244 - RSP_0673 - putative thioesterase 2280 59.62 -2 2414776..2415087 + 103 77464245 - RSP_6124 - hypothetical protein 2281 74.39 +1 2415483..2416595 + 370 77464246 - RSP_0674 - DNA polymerase III subunit delta' 2282 70.43 0 2416607..2417404 + 265 77464247 - RSP_0675 - putative TatD-related deoxyribonuclease 2283 69.92 0 2417404..2418201 + 265 77464248 - RSP_0676 - PhnP-like protein 2284 67.31 0 2418198..2419136 + 312 77464249 - RSP_0677 - malonate transporter MdcF 2285 74.82 +1 2419121..2421868 - 915 77464250 - RSP_0678 - hypothetical protein 2286 74.34 +1 2422303..2423058 - 251 77464251 - RSP_6125 - hypothetical protein 2287 68.89 0 2423236..2424180 - 314 77464252 hemC RSP_0679 - porphobilinogen deaminase 2288 67.25 0 2424282..2425313 + 343 77464253 hemE RSP_0680 - uroporphyrinogen decarboxylase 2289 72.46 0 2425488..2426039 + 183 77464254 - RSP_0681 - hypothetical protein 2290 68.72 0 2426180..2427055 - 291 77464255 hemF RSP_0682 - coproporphyrinogen III oxidase 2291 69.81 0 2427172..2427585 + 137 77464256 - RSP_0683 - hypothetical protein 2292 67.65 0 2427604..2428413 - 269 77464257 - RSP_0684 - oxidoreductase 2293 72.36 0 2428426..2429427 - 333 77464258 - RSP_0685 - 16S rRNA m(2)G 1207 methyltransferase 2294 61.68 -1 2429444..2429764 - 106 77464259 - RSP_0686 - ATP-dependent Clp protease adaptor protein clpS 2295 65.55 0 2429936..2430649 + 237 77464260 - RSP_0687 - HAD superfamily hydrolase 2296 68.79 0 2430748..2432253 + 501 77464261 - RSP_0688 - penicillin-binding protein 2297 63.52 -1 2432360..2432518 - 52 77464262 rdxS RSP_0689 - RdxS, cytochrome oxidase maturation protein, cbb3-type 2298 72.13 0 2432518..2434731 - 737 77464263 rdxI RSP_0690 - copper-translocating P-type ATPase, RdxI 2299 68.85 0 2434735..2435193 - 152 77464264 rdxH RSP_0691 - RdxH 2300 66.81 0 2435195..2436628 - 477 77464265 rdxB RSP_0692 - iron-sulfur cluster-binding protein 2301 65.41 0 2436863..2437735 - 290 77464266 ccoP RSP_0693 - Cbb3-type cytochrome c oxidase CcoP subunit 2302 63.73 -1 2437732..2437935 - 67 77464267 ccoQ RSP_0694 - Cbb3-type cytochrome c oxidase CcoQ subunit 2303 64.19 -1 2437948..2438673 - 241 77464268 ccoO RSP_0695 - Cbb3-type cytochrome c oxidase CcoO subunit 2304 62.75 -1 2438690..2440297 - 535 77464269 ccoN RSP_0696 - Cbb3-type cytochrome oxidase CcoN subunit 2305 69.85 0 2440493..2441341 + 282 77464270 - RSP_0697 - universal stress protein 2306 65.73 0 2441421..2442167 - 248 77464271 fnrL RSP_0698 - Crp-Fnr regulatory protein (FnrL) 2307 68.37 0 2442230..2443582 + 450 77464272 hemZ RSP_0699 - coproporphyrinogen III oxidase 2308 70.10 0 2443593..2444816 - 407 77464273 - RSP_0700 - glycosyltransferase 2309 70.10 0 2444822..2446453 - 543 77464274 - RSP_0701 - peptide ABC transporter ATPase 2310 65.94 0 2446450..2447556 - 368 77464275 - RSP_0702 - ABC peptide transporter, inner membrane subunit 2311 64.65 0 2447558..2448646 - 362 77464276 - RSP_0703 - ABC peptide transporter, inner membrane subunit 2312 65.53 0 2448662..2450599 - 645 77464277 - RSP_0704 - ABC peptide transporter, substrate binding protein 2313 68.38 0 2450768..2451292 - 174 77464278 - RSP_0705 - cytochrome cy 2314 68.11 0 2451344..2452246 + 300 77464279 pheA RSP_0706 - prephenate dehydratase 2315 72.19 0 2452265..2452771 - 168 77464280 - RSP_0707 - hypothetical protein 2316 72.75 0 2452809..2453762 - 317 77464281 - RSP_0708 - NUDIX hydrolase 2317 73.80 +1 2453997..2455889 + 630 77464282 cpdB RSP_0709 - 2',3'-cyclic-nucleotide 2'-phosphodiesterase 2318 70.67 0 2456212..2457960 + 582 77464283 dnaX RSP_0710 - DNA polymerase III subunits gamma and tau 2319 64.35 -1 2457973..2458317 + 114 77464284 YbaB RSP_0711 - hypothetical protein 2320 71.83 0 2458319..2458918 + 199 77464285 recR RSP_0712 - recombination protein RecR 2321 70.38 0 2458997..2460289 - 430 77464286 - RSP_0713 - hypothetical protein 2322 66.40 0 2460413..2461159 - 248 77464287 - RSP_0714 - hypothetical protein 2323 71.34 0 2461281..2461901 + 206 77464288 - RSP_0715 - ribonuclease T2 2324 72.75 0 2462206..2463192 - 328 77464289 - RSP_0716 - NADPH/quinone reductase and related Zn-dependent oxidoreductase 2325 71.72 0 2463336..2464028 - 230 77464290 - RSP_0717 - hypothetical protein 2326 63.77 -1 2464235..2464441 + 68 77464291 rpsU RSP_0718 - 30S ribosomal protein S21 2327 69.67 0 2464715..2465413 + 232 77464292 - RSP_0719 - phosphatidylserine decarboxylase 2328 65.99 0 2465417..2466154 + 245 77464293 pssA RSP_0720 - CDP-alcohol phosphatidyltransferase 2329 69.43 0 2466178..2466792 + 204 77464294 PmtA RSP_0721 - phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase 2330 65.58 0 2466831..2467289 - 152 77464295 - RSP_0722 - AsnC family transcriptional regulator 2331 71.76 0 2467429..2468547 + 372 77464296 ald RSP_0723 - L-alanine dehydrogenase 2332 63.04 -1 2468823..2469263 - 146 77464297 mscL RSP_0724 - large-conductance mechanosensitive channel 2333 71.38 0 2469725..2470276 - 183 77464298 - RSP_0725 - thioredoxin, thioldisulfide interchange protein 2334 69.70 0 2470298..2471713 + 471 77464299 - RSP_0726 - argininosuccinate lyase 2335 74.43 +1 2471865..2472083 + 72 77464300 - RSP_0727 - hypothetical protein 2336 66.35 0 2472085..2472402 + 105 77464301 - RSP_0728 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0