version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2082 71.68 0 2213501..2214538 - 345 77464047 - RSP_0478 - putative lysyl-tRNA synthetase 2083 63.49 -1 2214640..2215206 + 188 77464048 - RSP_0479 - elongation factor P 2084 71.05 0 2215294..2216661 - 455 77464049 uxuB RSP_0480 - D-mannonate oxidoreductase 2085 70.25 0 2216678..2217403 - 241 77464050 - RSP_0481 - 2-deoxy-D-gluconate 3-dehydrogenase 2086 67.64 0 2217400..2218224 - 274 77464051 kduI RSP_0482 - 5-keto-4-deoxyuronate isomerase 2087 67.33 0 2218366..2218668 - 100 77464052 - RSP_0483 - hypothetical protein 2088 67.21 0 2218676..2219956 - 426 77464053 - RSP_0484 - TRAP dicarboxylate family transporter DctM subunit 2089 67.77 0 2219959..2220504 - 181 77464054 - RSP_0485 - TRAP dicarboxylate family transporter DctQ subunit 2090 63.09 -1 2220567..2221544 - 325 77464055 - RSP_0487 - TRAP dicarboxylate family transporter DctP subunit 2091 69.30 0 2221570..2222976 - 468 77464056 uxaC RSP_0488 - glucuronate isomerase 2092 67.50 0 2223080..2223796 + 238 77464057 - RSP_0489 - GntR family transcriptional regulator 2093 73.31 +1 2223935..2224687 + 250 77464058 - RSP_0490 - 2-keto-3-deoxygluconate kinase 2094 71.92 0 2225114..2226445 + 443 77464059 hupT RSP_0491 - hydrogen uptake histidine-kinase 2095 71.00 0 2226442..2227434 + 330 77464060 hupU RSP_0492 - hydrogenase small subunit 2096 73.67 +1 2227431..2228858 + 475 77464061 hupV RSP_0493 - hydrogenase large subunit 2097 75.41 +1 2229068..2231344 + 758 77464062 hypF RSP_0494 - hydrogenase maturation factor F 2098 65.77 0 2231581..2232690 + 369 77464063 hupS RSP_0495 - hydrogenase protein small subunit 2099 65.44 0 2232694..2234484 + 596 77464064 hupL RSP_0496 - hydrogenase protein large subunit 2100 74.48 +1 2234496..2235071 + 191 77464065 - RSP_0497 - HupE/UreJ accessory protein 2101 62.96 -1 2235213..2235860 + 215 77464066 hupC RSP_0498 - Ni, Fe hydrogenase I cytochrome b subunit 2102 71.34 0 2236151..2236771 + 206 77464067 hupD RSP_0499 - HyaD peptidase 2103 74.21 +1 2236771..2237088 + 105 77464068 - RSP_0500 - putative HupF/HypC hydrogenase protein 2104 71.58 0 2237085..2237471 + 128 77464069 hupG RSP_0501 - HupG hydrogenase expression/formation protein 2105 69.72 0 2237483..2238301 + 272 77464070 hupH RSP_0502 - HupH hydrogenase expression/formation protein 2106 68.38 0 2238298..2239056 + 252 77464071 hupJ RSP_0503 - hypothetical protein 2107 74.78 +1 2239053..2239865 + 270 77464072 hupK RSP_0504 - HupK 2108 68.13 0 2239858..2240199 + 113 77464073 hypA RSP_0505 - hydrogenase expression/synthesis, HypA family 2109 66.09 0 2240199..2241068 + 289 77464074 hypB RSP_0506 - NI2+-binding GTPase protein HypB 2110 70.05 0 2241068..2242543 + 491 77464075 - RSP_0507 - HupR response regulator 2111 73.54 +1 2242545..2242835 + 96 77464076 hypC RSP_0508 - hydrogenase expression/formation protein HypC 2112 69.65 0 2242832..2243971 + 379 77464077 hypD RSP_0509 - hydrogenase isoenzyme formation protein HypD 2113 73.61 +1 2244022..2245044 + 340 77464078 hypE RSP_0510 - hydrogenase expression/formation protein HypE 2114 73.99 +1 2245112..2245507 + 131 77464079 - RSP_6117 - hypothetical protein 2115 73.61 +1 2245560..2246135 + 191 77464080 - RSP_0511 - two component LuxR family transcriptional regulator 2116 72.20 0 2246349..2249186 + 945 77464081 - RSP_0512 - PAS/PAC sensor hybrid histidine kinase 2117 69.19 0 2249199..2250626 - 475 77464082 - RSP_0513 - hypothetical protein 2118 70.41 0 2250807..2251820 - 337 77464083 - RSP_0514 - dTDP-glucose 4,6-dehydratase protein 2119 71.31 0 2251882..2252958 - 358 77464084 - RSP_0515 - hypothetical protein 2120 71.52 0 2252955..2254046 - 363 77464085 - RSP_0516 - hypothetical protein 2121 70.54 0 2254046..2255155 - 369 77464086 - RSP_0517 - hypothetical protein 2122 73.93 +1 2255157..2256257 - 366 77464087 - RSP_0518 - putative glycosyltransferase protein 2123 70.68 0 2256254..2258272 - 672 77464088 - RSP_0519 - NAD-dependent epimerase/dehydratase 2124 69.56 0 2258269..2259375 - 368 77464089 - RSP_0520 - NAD-dependent dehydratase/epimerase 2125 71.67 0 2259613..2260611 + 332 77464090 - RSP_0521 - putative Zn-containing dehydrogenase 2126 74.27 +1 2260602..2261627 + 341 77464091 - RSP_0522 - putative oxidoreductase 2127 67.17 0 2261634..2262422 + 262 77464092 - RSP_0523 - hypothetical protein 2128 68.28 0 2262525..2263328 - 267 77464093 - RSP_0524 - hypothetical protein 2129 70.15 0 2263490..2264149 + 219 77464094 - RSP_0525 - hypothetical protein 2130 70.14 0 2264159..2264590 + 143 77464095 - RSP_0526 - hypothetical protein 2131 72.34 0 2264623..2265927 - 434 77464096 rpoN RSP_0527 - sigma-54, RpoN 2132 68.50 0 2266028..2266354 - 108 77464097 nifW RSP_0528 - nitrogenase stabilizing/protective protein 2133 74.74 +1 2266463..2267539 - 358 77464098 nifV RSP_0529 - homocitrate synthase 2134 71.99 0 2267539..2268702 - 387 77464099 nifS RSP_0530 - cysteine desulfurase 2135 75.98 +1 2268702..2269442 - 246 77464100 nifU RSP_0531 - nitrogen fixation protein 2136 66.04 0 2269452..2269772 - 106 77464101 - RSP_0532 - hypothetical protein 2137 72.22 0 2270336..2270875 - 179 77464102 nifQ RSP_0533 - putative nitrogen fixation protein nifQ 2138 61.72 -1 2270856..2271158 - 100 77464103 - RSP_0534 - putative dimeric ferredoxin (FdIII) 2139 67.73 0 2271272..2271742 - 156 77464104 - RSP_0535 - hypothetical protein 2140 69.18 0 2271739..2272215 - 158 77464105 nifX RSP_0536 - putative nitrogenase molybdenum-iron protein NifX 2141 70.54 0 2272187..2273554 - 455 77464106 nifN RSP_0537 - nitrogenase molybdenum-iron protein beta chain, nifN 2142 69.19 0 2273554..2275017 - 487 77464107 nifE RSP_0538 - nifE, nitrogenase molybdenum-cofactor synthesis protein 2143 64.30 -1 2275264..2276784 - 506 77464108 nifK RSP_0539 - nitrogenase molybdenum-iron protein beta chain 2144 62.69 -1 2276885..2278366 - 493 77464109 nifD RSP_0540 - nitrogenase iron-molybdenum protein, alpha chain 2145 63.93 -1 2278428..2279303 - 291 77464110 nifH RSP_0541 - nitrogenase reductase 2146 73.04 +1 2279747..2280577 - 276 77464111 - RSP_0542 - hypothetical protein 2147 66.67 0 2280582..2280797 - 71 77464112 fixU RSP_0543 - hypothetical protein 2148 62.11 -1 2280794..2281078 - 94 77464113 nifZ RSP_0544 - nitrogen fixation protein NifZ 2149 76.43 +1 2281065..2281832 - 255 77464114 - RSP_0545 - hypothetical protein 2150 69.04 0 2282039..2283514 - 491 77464115 nifB RSP_0546 - NifB family--FeMo cofactor biosynthesis protein 2151 71.02 0 2283761..2285506 - 581 77464116 nifA RSP_0547 - NifA subfamily transcriptional regulator 2152 68.43 0 2285786..2286181 - 131 77464117 - RSP_0548 - hypothetical protein 2153 73.95 +1 2286494..2287276 + 260 77464118 - RSP_0549 - hypothetical protein 2154 68.35 0 2287395..2288462 + 355 77464119 - RSP_0550 - putative D-alanyl-D-alanine carboxypeptidase 2155 74.01 +1 2288475..2289128 + 217 77464120 - RSP_0551 - thymidylate kinase 2156 71.14 0 2289308..2289955 - 215 77464121 - RSP_6118 - hypothetical protein 2157 66.08 0 2290223..2290564 + 113 77464122 - RSP_0552 - multidrug ABC transporter 2158 71.25 0 2290834..2291859 - 341 77464123 ruvB RSP_0553 - Holliday junction DNA helicase B 2159 70.21 0 2291924..2292826 - 300 77464124 htpx RSP_0554 - heat shock protein HtpX 2160 72.15 0 2292945..2293619 - 224 77464125 ruvA RSP_0555 - Holliday junction DNA helicase motor protein 2161 68.05 0 2293616..2294122 - 168 77464126 ruvC RSP_0556 - Holliday junction resolvase 2162 69.95 0 2294442..2294654 + 70 77464127 - RSP_0557 - hypothetical protein 2163 70.09 0 2295006..2295881 - 291 77464128 - RSP_0558 - 50S ribosomal protein L11P methyltransferase 2164 68.44 0 2295945..2296619 - 224 77464129 msrA RSP_0559 - peptide methionine sulfoxide reductase 2165 73.73 +1 2296841..2299033 - 730 77464130 priA RSP_0560 - primosome assembly protein PriA 2166 64.70 0 2299128..2299787 + 219 77464131 - RSP_0561 - putative translaldolase 2167 69.28 0 2299810..2300499 + 229 77464132 - RSP_0562 - hypothetical protein 2168 74.38 +1 2300496..2301416 + 306 77464133 xerC RSP_0563 - site-specific tyrosine recombinase XerC 2169 74.31 +1 2301525..2302244 + 239 77464134 - RSP_0564 - hypothetical protein 2170 63.88 -1 2302340..2303056 + 238 77464135 - RSP_0565 - CDP-diacylglycerol-choline O-phosphatidyltransferase 2171 70.61 0 2303064..2303900 - 278 77464136 - RSP_0566 - DMT family permease 2172 73.87 +1 2303964..2304407 - 147 77464137 - RSP_0567 - methylated-DNA-(protein)-cysteine S-methyltransferase 2173 74.80 +1 2304404..2304649 - 81 77464138 - RSP_6119 - hypothetical protein 2174 66.02 0 2304633..2307587 - 984 77464139 ileS RSP_0568 - isoleucyl-tRNA synthetase 2175 72.82 0 2307782..2308837 - 351 77464140 - RSP_0569 - hypothetical protein 2176 70.65 0 2308938..2310368 - 476 77464141 - RSP_0570 - hypothetical protein 2177 72.53 0 2310595..2311362 + 255 77464142 truA RSP_0571 - tRNA pseudouridine synthase A 2178 72.41 0 2311564..2313651 - 695 77464143 - RSP_0572 - putative exonuclease 2179 67.44 0 2313655..2314044 - 129 77464144 phoB RSP_0573 - response regulator receiver protein 2180 71.07 0 2314046..2314567 - 173 77464145 - RSP_0574 - hypothetical protein 2181 69.19 0 2314578..2316398 - 606 77464146 - RSP_0575 - signal transduction protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0