version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2030 73.83 +1 2154124..2154570 - 148 77463995 - RSP_0422 - hypothetical protein 2031 69.64 0 2154649..2155689 - 346 77463996 - RSP_0423 - aldo/keto reductase 2032 72.58 0 2155955..2156563 + 202 77463997 - RSP_0424 - hypothetical protein 2033 66.61 0 2156707..2158425 + 572 77463998 metG RSP_0425 - methionyl-tRNA synthetase 2034 69.79 0 2158701..2161199 - 832 77463999 - RSP_0426 - Na+/H+ antiporter 2035 62.42 -1 2161273..2161602 - 109 77464000 - RSP_0427 - hypothetical protein 2036 72.79 0 2161946..2163268 - 440 77464001 - RSP_0428 - hypothetical protein 2037 69.14 0 2163545..2165401 + 618 77464002 - RSP_0429 - multidrug ABC transporter ATP-binding protein 2038 67.57 0 2165424..2165645 - 73 77464003 - RSP_6228 - hypothetical protein 2039 74.47 +1 2165851..2166786 + 311 77464004 cobD RSP_0430 - adenosylcobinamide-phosphate synthase 2040 66.99 0 2167014..2168234 - 406 77464005 - RSP_0431 - putative selenocysteine lyase 2041 68.91 0 2168244..2168822 - 192 77464006 - RSP_0432 - hypothetical protein 2042 67.08 0 2168819..2169298 - 159 77464007 - RSP_0433 - hypothetical protein 2043 65.09 0 2170582..2171340 - 252 77464008 SufC RSP_0437 - SUF C, ATPase 2044 65.06 0 2171350..2171661 - 103 77464009 - RSP_0439 - hypothetical protein 2045 63.49 -1 2171696..2173237 - 513 77464010 sufB RSP_0440 - cysteine desulfurase activator complex subunit SufB 2046 72.11 0 2173313..2174359 - 348 77464011 - RSP_0442 - putative aminotransferase 2047 63.46 -1 2174442..2174909 - 155 77464012 - RSP_0443 - BadM/Rrf2 family transcriptional regulator 2048 64.70 0 2175063..2175722 + 219 77464013 - RSP_0444 - hypothetical protein 2049 69.74 0 2175719..2176303 + 194 77464014 - RSP_0445 - hypothetical protein 2050 64.69 0 2176388..2177602 + 404 77464015 - RSP_0446 - isocitrate dehydrogenase 2051 66.67 0 2177913..2178515 + 200 77464016 - RSP_0447 - hypothetical protein 2052 67.76 0 2178615..2180435 + 606 77464017 - RSP_0448 - EF-Tu; elongation factor Tu 2053 70.19 0 2180481..2181275 - 264 77464018 - RSP_0449 - putative glutamine amidotransferase 2054 70.10 0 2181431..2181721 - 96 77464019 - RSP_0450 - hypothetical protein 2055 68.82 0 2181723..2184374 - 883 77464020 alaS RSP_0451 - alanyl-tRNA synthetase 2056 63.69 -1 2184461..2185534 - 357 77464021 recA RSP_0452 - recombinase A 2057 63.79 -1 2185729..2186319 + 196 77464022 - RSP_0453 - hypothetical protein 2058 68.14 0 2186323..2188623 - 766 77464023 - RSP_0454 - multisensor hybrid histidine kinase 2059 74.83 +1 2188723..2189886 - 387 77464024 - RSP_0455 - NOL1/NOP2/sun family protein 2060 67.18 0 2189977..2190756 + 259 77464025 glpR RSP_0457 - glycerol-3-phosphate regulon repressor 2061 71.64 0 2190753..2191436 - 227 77464026 - RSP_0456 - hypothetical protein 2062 70.50 0 2191438..2191854 - 138 77464027 - RSP_0458 - hypothetical protein 2063 64.82 0 2192148..2193230 + 360 77464028 - RSP_0459 - hypothetical protein 2064 69.58 0 2193574..2196765 - 1063 77464029 - RSP_0460 - AcrB/AcrD/AcrF family cation/multidrug efflux pump 2065 72.96 +1 2196758..2197711 - 317 77464030 - RSP_0461 - multidrug/cation efflux pump 2066 70.20 0 2197833..2198087 + 84 77464031 - RSP_0462 - hypothetical protein 2067 68.13 0 2198150..2199037 - 295 77464032 - RSP_0463 - cation efflux transporter 2068 70.90 0 2199168..2200064 - 298 77464033 - RSP_0464 - putative protease 2069 68.30 0 2200069..2201049 - 326 77464034 - RSP_0465 - putative protease 2070 71.24 0 2201049..2201573 - 174 77464035 - RSP_0466 - hypothetical protein 2071 70.48 0 2201698..2203191 + 497 77464036 ubiD RSP_0467 - 3-octaprenyl-4hydroxybenzoate decarboxylase 2072 74.23 +1 2203188..2203742 + 184 77464037 - RSP_0468 - putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2073 69.29 0 2203870..2205090 - 406 77464038 - RSP_0469 - hypothetical protein 2074 74.90 +1 2205174..2206691 - 505 77464039 - RSP_0470 - hypothetical protein 2075 66.67 0 2206851..2207183 + 110 77464040 - RSP_6116 - hypothetical protein 2076 70.12 0 2207288..2208010 + 240 77464041 - RSP_0472 - hypothetical protein 2077 70.66 0 2208007..2209557 + 516 77464042 - RSP_0473 - phospholipase-D family protein 2078 66.67 0 2209777..2210226 + 149 77464043 cycP RSP_0474 - cytochrome c' 2079 70.67 0 2210230..2210829 + 199 77464044 - RSP_0475 - cytochrome b 2080 68.53 0 2210875..2211519 - 214 77464045 - RSP_0476 - L-fuculose-phosphate aldolase 2081 73.68 +1 2211874..2213370 + 498 77464046 - RSP_0477 - hypothetical protein 2082 71.68 0 2213501..2214538 - 345 77464047 - RSP_0478 - putative lysyl-tRNA synthetase 2083 63.49 -1 2214640..2215206 + 188 77464048 - RSP_0479 - elongation factor P 2084 71.05 0 2215294..2216661 - 455 77464049 uxuB RSP_0480 - D-mannonate oxidoreductase 2085 70.25 0 2216678..2217403 - 241 77464050 - RSP_0481 - 2-deoxy-D-gluconate 3-dehydrogenase 2086 67.64 0 2217400..2218224 - 274 77464051 kduI RSP_0482 - 5-keto-4-deoxyuronate isomerase 2087 67.33 0 2218366..2218668 - 100 77464052 - RSP_0483 - hypothetical protein 2088 67.21 0 2218676..2219956 - 426 77464053 - RSP_0484 - TRAP dicarboxylate family transporter DctM subunit 2089 67.77 0 2219959..2220504 - 181 77464054 - RSP_0485 - TRAP dicarboxylate family transporter DctQ subunit 2090 63.09 -1 2220567..2221544 - 325 77464055 - RSP_0487 - TRAP dicarboxylate family transporter DctP subunit 2091 69.30 0 2221570..2222976 - 468 77464056 uxaC RSP_0488 - glucuronate isomerase 2092 67.50 0 2223080..2223796 + 238 77464057 - RSP_0489 - GntR family transcriptional regulator 2093 73.31 +1 2223935..2224687 + 250 77464058 - RSP_0490 - 2-keto-3-deoxygluconate kinase 2094 71.92 0 2225114..2226445 + 443 77464059 hupT RSP_0491 - hydrogen uptake histidine-kinase 2095 71.00 0 2226442..2227434 + 330 77464060 hupU RSP_0492 - hydrogenase small subunit 2096 73.67 +1 2227431..2228858 + 475 77464061 hupV RSP_0493 - hydrogenase large subunit 2097 75.41 +1 2229068..2231344 + 758 77464062 hypF RSP_0494 - hydrogenase maturation factor F 2098 65.77 0 2231581..2232690 + 369 77464063 hupS RSP_0495 - hydrogenase protein small subunit 2099 65.44 0 2232694..2234484 + 596 77464064 hupL RSP_0496 - hydrogenase protein large subunit 2100 74.48 +1 2234496..2235071 + 191 77464065 - RSP_0497 - HupE/UreJ accessory protein 2101 62.96 -1 2235213..2235860 + 215 77464066 hupC RSP_0498 - Ni, Fe hydrogenase I cytochrome b subunit 2102 71.34 0 2236151..2236771 + 206 77464067 hupD RSP_0499 - HyaD peptidase 2103 74.21 +1 2236771..2237088 + 105 77464068 - RSP_0500 - putative HupF/HypC hydrogenase protein 2104 71.58 0 2237085..2237471 + 128 77464069 hupG RSP_0501 - HupG hydrogenase expression/formation protein 2105 69.72 0 2237483..2238301 + 272 77464070 hupH RSP_0502 - HupH hydrogenase expression/formation protein 2106 68.38 0 2238298..2239056 + 252 77464071 hupJ RSP_0503 - hypothetical protein 2107 74.78 +1 2239053..2239865 + 270 77464072 hupK RSP_0504 - HupK 2108 68.13 0 2239858..2240199 + 113 77464073 hypA RSP_0505 - hydrogenase expression/synthesis, HypA family 2109 66.09 0 2240199..2241068 + 289 77464074 hypB RSP_0506 - NI2+-binding GTPase protein HypB 2110 70.05 0 2241068..2242543 + 491 77464075 - RSP_0507 - HupR response regulator 2111 73.54 +1 2242545..2242835 + 96 77464076 hypC RSP_0508 - hydrogenase expression/formation protein HypC 2112 69.65 0 2242832..2243971 + 379 77464077 hypD RSP_0509 - hydrogenase isoenzyme formation protein HypD 2113 73.61 +1 2244022..2245044 + 340 77464078 hypE RSP_0510 - hydrogenase expression/formation protein HypE 2114 73.99 +1 2245112..2245507 + 131 77464079 - RSP_6117 - hypothetical protein 2115 73.61 +1 2245560..2246135 + 191 77464080 - RSP_0511 - two component LuxR family transcriptional regulator 2116 72.20 0 2246349..2249186 + 945 77464081 - RSP_0512 - PAS/PAC sensor hybrid histidine kinase 2117 69.19 0 2249199..2250626 - 475 77464082 - RSP_0513 - hypothetical protein 2118 70.41 0 2250807..2251820 - 337 77464083 - RSP_0514 - dTDP-glucose 4,6-dehydratase protein 2119 71.31 0 2251882..2252958 - 358 77464084 - RSP_0515 - hypothetical protein 2120 71.52 0 2252955..2254046 - 363 77464085 - RSP_0516 - hypothetical protein 2121 70.54 0 2254046..2255155 - 369 77464086 - RSP_0517 - hypothetical protein 2122 73.93 +1 2255157..2256257 - 366 77464087 - RSP_0518 - putative glycosyltransferase protein 2123 70.68 0 2256254..2258272 - 672 77464088 - RSP_0519 - NAD-dependent epimerase/dehydratase 2124 69.56 0 2258269..2259375 - 368 77464089 - RSP_0520 - NAD-dependent dehydratase/epimerase 2125 71.67 0 2259613..2260611 + 332 77464090 - RSP_0521 - putative Zn-containing dehydrogenase 2126 74.27 +1 2260602..2261627 + 341 77464091 - RSP_0522 - putative oxidoreductase 2127 67.17 0 2261634..2262422 + 262 77464092 - RSP_0523 - hypothetical protein 2128 68.28 0 2262525..2263328 - 267 77464093 - RSP_0524 - hypothetical protein 2129 70.15 0 2263490..2264149 + 219 77464094 - RSP_0525 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.