version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1999 75.63 +1 2122870..2123940 - 356 77463964 - RSP_0393 - diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 2000 64.74 0 2123955..2124422 - 155 77463965 - RSP_0394 - transcriptional regulator NrdR 2001 72.44 0 2124644..2125024 - 126 77463966 - RSP_0396 - hypothetical protein 2002 64.97 0 2125036..2127042 - 668 77463967 rpoD RSP_0395 - RNA polymerase sigma factor RpoD 2003 71.01 0 2127147..2129078 - 643 77463968 dnaG RSP_0397 - DNA primase 2004 67.16 0 2129201..2130628 - 475 77463969 - RSP_0398 - dehydrogenase 2005 66.96 0 2130992..2132692 + 566 77463970 - RSP_0399 - hypothetical protein 2006 68.28 0 2132689..2133246 + 185 77463971 - RSP_0400 - hypothetical protein 2007 64.80 0 2133250..2133786 + 178 77463972 - RSP_0401 - hypothetical protein 2008 69.54 0 2133851..2134441 - 196 77463973 - RSP_0402 - TetR family transcriptional regulator 2009 70.40 0 2134939..2136225 + 428 77463974 - RSP_0403 - homoserine dehydrogenase 2010 69.46 0 2136288..2137253 + 321 77463975 glpX RSP_0404 - fructose 1,6-bisphosphatase II 2011 75.06 +1 2137250..2139001 + 583 77463976 - RSP_0405 - single-stranded DNA-specific exonuclease 2012 70.69 0 2139213..2140256 - 347 77463977 - RSP_0406 - periplasmic sensor diguanylate cyclase (GGDEF) 2013 68.07 0 2140469..2141464 - 331 77463978 - RSP_0407 - D-lactate dehydrogenase 2014 73.91 +1 2141667..2142605 + 312 77463979 - RSP_0408 - hypothetical protein 2015 73.61 +1 2142602..2143480 + 292 77463980 - RSP_0409 - hypothetical protein 2016 71.03 0 2143501..2144508 - 335 77463981 - RSP_0410 - sensor diguanylate cyclase (GGDEF) 2017 69.22 0 2144508..2145095 - 195 77463982 - RSP_6114 - hypothetical protein 2018 73.81 +1 2145159..2146880 - 573 77463983 - RSP_0411 - hypothetical protein 2019 71.86 0 2147002..2147694 - 230 77463984 - RSP_0412 - putative phosphatase 2020 70.97 0 2147750..2148028 - 92 77463985 - RSP_6115 - hypothetical protein 2021 73.59 +1 2148157..2149542 + 461 77463986 - RSP_0413 - response regulator receiver modulated diguanylate cyclase 2022 73.30 +1 2149704..2150231 - 175 77463987 - RSP_0414 - hypothetical protein 2023 72.50 0 2150233..2150592 - 119 77463988 - RSP_6227 - hypothetical protein 2024 72.73 0 2150594..2151187 - 197 77463989 - RSP_0415 - RNA polymerase sigma factor 2025 73.52 +1 2151264..2151920 - 218 77463990 - RSP_0416 - calcium-binding EF-hand domain-containing protein 2026 67.15 0 2152121..2152531 + 136 77463991 - RSP_0418 - hypothetical protein 2027 73.16 +1 2152500..2153177 + 225 77463992 - RSP_0419 - hypothetical protein 2028 72.80 0 2153246..2153620 - 124 77463993 - RSP_0420 - hypothetical protein 2029 75.25 +1 2153636..2154136 - 166 77463994 - RSP_0421 - hypothetical protein 2030 73.83 +1 2154124..2154570 - 148 77463995 - RSP_0422 - hypothetical protein 2031 69.64 0 2154649..2155689 - 346 77463996 - RSP_0423 - aldo/keto reductase 2032 72.58 0 2155955..2156563 + 202 77463997 - RSP_0424 - hypothetical protein 2033 66.61 0 2156707..2158425 + 572 77463998 metG RSP_0425 - methionyl-tRNA synthetase 2034 69.79 0 2158701..2161199 - 832 77463999 - RSP_0426 - Na+/H+ antiporter 2035 62.42 -1 2161273..2161602 - 109 77464000 - RSP_0427 - hypothetical protein 2036 72.79 0 2161946..2163268 - 440 77464001 - RSP_0428 - hypothetical protein 2037 69.14 0 2163545..2165401 + 618 77464002 - RSP_0429 - multidrug ABC transporter ATP-binding protein 2038 67.57 0 2165424..2165645 - 73 77464003 - RSP_6228 - hypothetical protein 2039 74.47 +1 2165851..2166786 + 311 77464004 cobD RSP_0430 - adenosylcobinamide-phosphate synthase 2040 66.99 0 2167014..2168234 - 406 77464005 - RSP_0431 - putative selenocysteine lyase 2041 68.91 0 2168244..2168822 - 192 77464006 - RSP_0432 - hypothetical protein 2042 67.08 0 2168819..2169298 - 159 77464007 - RSP_0433 - hypothetical protein 2043 65.09 0 2170582..2171340 - 252 77464008 SufC RSP_0437 - SUF C, ATPase 2044 65.06 0 2171350..2171661 - 103 77464009 - RSP_0439 - hypothetical protein 2045 63.49 -1 2171696..2173237 - 513 77464010 sufB RSP_0440 - cysteine desulfurase activator complex subunit SufB 2046 72.11 0 2173313..2174359 - 348 77464011 - RSP_0442 - putative aminotransferase 2047 63.46 -1 2174442..2174909 - 155 77464012 - RSP_0443 - BadM/Rrf2 family transcriptional regulator 2048 64.70 0 2175063..2175722 + 219 77464013 - RSP_0444 - hypothetical protein 2049 69.74 0 2175719..2176303 + 194 77464014 - RSP_0445 - hypothetical protein 2050 64.69 0 2176388..2177602 + 404 77464015 - RSP_0446 - isocitrate dehydrogenase 2051 66.67 0 2177913..2178515 + 200 77464016 - RSP_0447 - hypothetical protein 2052 67.76 0 2178615..2180435 + 606 77464017 - RSP_0448 - EF-Tu; elongation factor Tu 2053 70.19 0 2180481..2181275 - 264 77464018 - RSP_0449 - putative glutamine amidotransferase 2054 70.10 0 2181431..2181721 - 96 77464019 - RSP_0450 - hypothetical protein 2055 68.82 0 2181723..2184374 - 883 77464020 alaS RSP_0451 - alanyl-tRNA synthetase 2056 63.69 -1 2184461..2185534 - 357 77464021 recA RSP_0452 - recombinase A 2057 63.79 -1 2185729..2186319 + 196 77464022 - RSP_0453 - hypothetical protein 2058 68.14 0 2186323..2188623 - 766 77464023 - RSP_0454 - multisensor hybrid histidine kinase 2059 74.83 +1 2188723..2189886 - 387 77464024 - RSP_0455 - NOL1/NOP2/sun family protein 2060 67.18 0 2189977..2190756 + 259 77464025 glpR RSP_0457 - glycerol-3-phosphate regulon repressor 2061 71.64 0 2190753..2191436 - 227 77464026 - RSP_0456 - hypothetical protein 2062 70.50 0 2191438..2191854 - 138 77464027 - RSP_0458 - hypothetical protein 2063 64.82 0 2192148..2193230 + 360 77464028 - RSP_0459 - hypothetical protein 2064 69.58 0 2193574..2196765 - 1063 77464029 - RSP_0460 - AcrB/AcrD/AcrF family cation/multidrug efflux pump 2065 72.96 +1 2196758..2197711 - 317 77464030 - RSP_0461 - multidrug/cation efflux pump 2066 70.20 0 2197833..2198087 + 84 77464031 - RSP_0462 - hypothetical protein 2067 68.13 0 2198150..2199037 - 295 77464032 - RSP_0463 - cation efflux transporter 2068 70.90 0 2199168..2200064 - 298 77464033 - RSP_0464 - putative protease 2069 68.30 0 2200069..2201049 - 326 77464034 - RSP_0465 - putative protease 2070 71.24 0 2201049..2201573 - 174 77464035 - RSP_0466 - hypothetical protein 2071 70.48 0 2201698..2203191 + 497 77464036 ubiD RSP_0467 - 3-octaprenyl-4hydroxybenzoate decarboxylase 2072 74.23 +1 2203188..2203742 + 184 77464037 - RSP_0468 - putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2073 69.29 0 2203870..2205090 - 406 77464038 - RSP_0469 - hypothetical protein 2074 74.90 +1 2205174..2206691 - 505 77464039 - RSP_0470 - hypothetical protein 2075 66.67 0 2206851..2207183 + 110 77464040 - RSP_6116 - hypothetical protein 2076 70.12 0 2207288..2208010 + 240 77464041 - RSP_0472 - hypothetical protein 2077 70.66 0 2208007..2209557 + 516 77464042 - RSP_0473 - phospholipase-D family protein 2078 66.67 0 2209777..2210226 + 149 77464043 cycP RSP_0474 - cytochrome c' 2079 70.67 0 2210230..2210829 + 199 77464044 - RSP_0475 - cytochrome b 2080 68.53 0 2210875..2211519 - 214 77464045 - RSP_0476 - L-fuculose-phosphate aldolase 2081 73.68 +1 2211874..2213370 + 498 77464046 - RSP_0477 - hypothetical protein 2082 71.68 0 2213501..2214538 - 345 77464047 - RSP_0478 - putative lysyl-tRNA synthetase 2083 63.49 -1 2214640..2215206 + 188 77464048 - RSP_0479 - elongation factor P 2084 71.05 0 2215294..2216661 - 455 77464049 uxuB RSP_0480 - D-mannonate oxidoreductase 2085 70.25 0 2216678..2217403 - 241 77464050 - RSP_0481 - 2-deoxy-D-gluconate 3-dehydrogenase 2086 67.64 0 2217400..2218224 - 274 77464051 kduI RSP_0482 - 5-keto-4-deoxyuronate isomerase 2087 67.33 0 2218366..2218668 - 100 77464052 - RSP_0483 - hypothetical protein 2088 67.21 0 2218676..2219956 - 426 77464053 - RSP_0484 - TRAP dicarboxylate family transporter DctM subunit 2089 67.77 0 2219959..2220504 - 181 77464054 - RSP_0485 - TRAP dicarboxylate family transporter DctQ subunit 2090 63.09 -1 2220567..2221544 - 325 77464055 - RSP_0487 - TRAP dicarboxylate family transporter DctP subunit 2091 69.30 0 2221570..2222976 - 468 77464056 uxaC RSP_0488 - glucuronate isomerase 2092 67.50 0 2223080..2223796 + 238 77464057 - RSP_0489 - GntR family transcriptional regulator 2093 73.31 +1 2223935..2224687 + 250 77464058 - RSP_0490 - 2-keto-3-deoxygluconate kinase 2094 71.92 0 2225114..2226445 + 443 77464059 hupT RSP_0491 - hydrogen uptake histidine-kinase 2095 71.00 0 2226442..2227434 + 330 77464060 hupU RSP_0492 - hydrogenase small subunit 2096 73.67 +1 2227431..2228858 + 475 77464061 hupV RSP_0493 - hydrogenase large subunit 2097 75.41 +1 2229068..2231344 + 758 77464062 hypF RSP_0494 - hydrogenase maturation factor F 2098 65.77 0 2231581..2232690 + 369 77464063 hupS RSP_0495 - hydrogenase protein small subunit 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.