version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1864 57.14 -2 1982953..1983015 - 20 77463829 pufK RSP_6109 - transcriptional regulatory protein pufK 1865 66.24 0 1983082..1983315 - 77 77463830 pufQ RSP_0259 - protein pufQ 1866 66.06 0 1983312..1984787 - 491 77463831 bchZ RSP_0260 - putative chlorophyllide reductase, BchZ subunit 1867 70.84 0 1984787..1986295 - 502 77463832 bchY RSP_0261 - chlorophyllide reductase, BchY subunit 1868 65.97 0 1986371..1987372 - 333 77463833 bchX RSP_0262 - chlorophyllide reductase, BchX subunit 1869 69.91 0 1987369..1988325 - 318 77463834 bchC RSP_0263 - chlorophyll synthesis pathway, bchC 1870 71.58 0 1988478..1989617 - 379 77463835 crtF RSP_0264 - hydroxyneurosporene-O-methyltransferase 1871 71.86 0 1989670..1990536 - 288 77463836 crtE RSP_0265 - farnesyl-diphosphate synthase 1872 73.05 +1 1990681..1992168 + 495 77463837 crtD RSP_0266 - methoxyneurosporene dehydrogenase 1873 71.19 0 1992234..1993073 + 279 77463838 ctrC RSP_0267 - hydroxyneurosporene synthase 1874 65.83 0 1993234..1993710 - 158 77463839 tspO RSP_0269 - tryptophan rich sensory protein 1875 72.57 0 1993742..1994809 - 355 77463840 crtB RSP_0270 - phytoene synthase 1876 67.24 0 1994806..1996362 - 518 77463841 crtI RSP_0271 - phytoene dehydrogenase 1877 67.59 0 1996520..1997494 + 324 77463842 crtA RSP_0272 - spheroidene monooxygenase 1878 70.65 0 1997499..1998503 + 334 77463843 bchI RSP_0273 - magnesium chelatase subunit I 1879 76.52 +1 1998500..2000194 + 564 77463844 bchD RSP_0274 - magnesium chelatase subunit D 1880 71.40 0 2000197..2001063 + 288 77463845 bchO RSP_0275 - magnesium-chelatase, BchO 1881 68.35 0 2001312..2001845 - 177 77463846 - RSP_0276 - isopentenyl-diphosphate delta-isomerase 1882 67.43 0 2001848..2003032 - 394 77463847 bchP RSP_0277 - geranylgeranyl hydrogenase 1883 71.18 0 2003035..2004318 - 427 77463848 - RSP_0278 - putative light-harvesting 1 (B870) complex assembly protein PucC 1884 68.43 0 2004315..2005223 - 302 77463849 bchG RSP_0279 - bacteriochlorophyll/chlorophyll a synthase 1885 72.14 0 2005297..2005917 - 206 77463850 bchJ RSP_0280 - bacteriochlorophyll synthase, 23 kDa subunit (bchJ) 1886 65.04 0 2005924..2007762 - 612 77463851 bchE RSP_0281 - magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66 kDa subunit(bchE) 1887 68.03 0 2007910..2009304 - 464 77463852 ppsR RSP_0282 - transcriptional regulator PpsR 1888 68.05 0 2009363..2010157 - 264 77463853 ppaA RSP_0283 - regulatory protein, PpaA 1889 66.46 0 2010530..2011012 + 160 77463854 bchF RSP_0284 - 2-vinyl bacteriochlorophyllide hydratase 1890 71.87 0 2011009..2012295 + 428 77463855 bchN RSP_0285 - light-independent protochlorophyllide reductase subunit N 1891 68.66 0 2012366..2013970 + 534 77463856 bchB RSP_0286 - light-independent protochlorophyllide reductase subunit B 1892 68.98 0 2013960..2017541 + 1193 77463857 bchH RSP_0287 - magnesium chelatase subunit H 1893 64.65 0 2017603..2018496 + 297 77463858 chlL RSP_0288 - protochlorophyllide reductase iron-sulfur ATP-binding protein 1894 67.71 0 2018540..2019208 + 222 77463859 bchM RSP_0289 - Mg-protoporphyrin IX methyl transferase 1895 70.21 0 2019205..2020644 + 479 77463860 - RSP_0290 - light-harvesting 1 (B870) complex assembly 1896 66.79 0 2020663..2021445 + 260 77463861 puhA RSP_0291 - reaction centre H protein 1897 71.16 0 2021573..2022217 + 214 77463862 - RSP_0292 - hypothetical protein 1898 68.17 0 2022294..2022758 + 154 77463863 - RSP_0293 - hypothetical protein 1899 64.31 -1 2022780..2023076 + 98 77463864 - RSP_6110 - hypothetical protein 1900 64.84 0 2023073..2024164 + 363 77463865 - RSP_0294 - magnesium-protoporphyrin IX monomethyl ester cyclase 1901 68.73 0 2024226..2025098 + 290 77463866 - RSP_0295 - hypothetical protein 1902 64.38 -1 2025438..2025875 + 145 77463867 cycA RSP_0296 - cytochrome c2 1903 66.67 0 2026281..2026979 - 232 77463868 - RSP_0297 - ABC branched chain amino acid transporter, ATPase subunit 1904 67.07 0 2026976..2027719 - 247 77463869 - RSP_0298 - ABC branched chain amino acid transporter, ATPase subunit 1905 69.10 0 2027716..2028948 - 410 77463870 - RSP_0299 - ABC branched chain amino acid transporter, inner membrane subunit 1906 70.55 0 2029315..2031243 - 642 77463871 - RSP_0300 - ABC branched chain amino acid transporter, inner membrane subunit 1907 62.61 -1 2031307..2032587 - 426 77463872 - RSP_0301 - ABC branched chain amino acid transporter, substrate binding protein 1908 69.23 0 2032887..2033510 - 207 77463873 ureG RSP_0302 - urease accessory protein G 1909 74.88 +1 2033507..2034139 - 210 77463874 ureF RSP_0303 - urease accessory protein UreF 1910 71.22 0 2034136..2034684 - 182 77463875 ureE RSP_0304 - urease accessory protein UreE 1911 70.24 0 2034681..2035100 - 139 77463876 - RSP_0305 - hypothetical protein 1912 67.96 0 2035102..2036808 - 568 77463877 ureC RSP_6111 - urease subunit alpha 1913 69.76 0 2036968..2037840 + 290 77463878 - RSP_0306 - class I diheme cytochrome c 1914 72.01 0 2037896..2038213 - 105 77463879 - RSP_0307 - antifreeze protein, type I 1915 63.73 -1 2038238..2038543 - 101 77463880 ureB RSP_0308 - urease subunit beta 1916 65.02 0 2038594..2038896 - 100 77463881 ureA RSP_0309 - urease subunit gamma 1917 75.85 +1 2038908..2039735 - 275 77463882 ureD RSP_0310 - urease accessory protein UreD 1918 72.94 +1 2039862..2040977 + 371 77463883 - RSP_0311 - putative aminotransferase protein 1919 73.46 +1 2041012..2042322 + 436 77463884 - RSP_0312 - aminotransferase 1920 61.07 -1 2042383..2042757 + 124 77463885 - RSP_0313 - hypothetical protein 1921 63.46 -1 2042750..2042905 + 51 77463886 pucB RSP_0314 - LHII beta, light-harvesting B800/850 protein 1922 63.64 -1 2042921..2043085 + 54 77463887 pucA RSP_6256 - LHII alpha, light-harvesting B800/850 protein 1923 69.20 0 2043280..2044659 + 459 77463888 pucC RSP_0315 - light-harvesting 1 (B870) complex assembly 1924 66.20 0 2045159..2045800 + 213 77463889 - RSP_0316 - LuxR family transcriptional regulator 1925 66.96 0 2045850..2047208 - 452 77463890 hemN RSP_0317 - coproporphyrinogen III oxidase 1926 71.70 0 2047282..2047977 - 231 77463891 - RSP_0318 - hypothetical protein 1927 68.47 0 2047974..2048195 - 73 77463892 - RSP_0319 - NnrU 1928 70.69 0 2048192..2048365 - 57 77463893 NnrT RSP_0320 - hypothetical protein 1929 72.00 0 2048367..2050241 - 624 77463894 norD RSP_0321 - NorD nitric oxide reductase activation protein 1930 67.92 0 2050246..2051043 - 265 77463895 norQ RSP_0322 - NorQ protein required for nitric oxide reductase activity 1931 63.31 -1 2051040..2052380 - 446 77463896 norB RSP_0323 - nitric oxide reductase large subunit, cytochrome b 1932 66.00 0 2052394..2052846 - 150 77463897 norC RSP_0324 - nitric oxide reductase subunit C, cytochrome c 1933 70.53 0 2052996..2053202 + 68 77463898 - RSP_0325 - hypothetical protein 1934 73.74 +1 2053376..2053912 + 178 77463899 - RSP_0326 - hypothetical protein 1935 69.80 0 2053920..2054621 - 233 77463900 nnrR RSP_0327 - Crp/FNR family transcriptional regulator 1936 69.85 0 2054833..2056026 + 397 77463901 nnrS RSP_0328 - hypothetical protein 1937 68.15 0 2056160..2057170 + 336 77463902 - RSP_0329 - diguanylate cyclase with GAF sensor 1938 70.62 0 2057186..2057590 - 134 77463903 - RSP_0330 - hypothetical protein 1939 74.17 +1 2057613..2059451 - 612 77463904 - RSP_0331 - hypothetical protein 1940 71.58 0 2059448..2061625 - 725 77463905 - RSP_0332 - cellulose synthase 1941 68.99 0 2061625..2063991 - 788 77463906 - RSP_0333 - cellulose synthase 1942 72.47 0 2064025..2064696 - 223 77463907 - RSP_0334 - hypothetical protein 1943 70.51 0 2065080..2067449 + 789 77463908 - RSP_0335 - diguanylate cyclase/phosphodiesterase 1944 69.34 0 2067539..2068360 - 273 77463909 - RSP_0337 - phospodiesterase 1945 69.61 0 2068357..2069274 - 305 77463910 - RSP_0338 - hypothetical protein 1946 69.82 0 2069349..2069918 - 189 77463911 - RSP_0339 - hypothetical protein 1947 68.43 0 2070079..2071101 - 340 77463912 - RSP_0340 - hypothetical protein 1948 69.17 0 2071291..2072568 - 425 77463913 - RSP_0341 - cytosine deaminase 1949 69.73 0 2072568..2073515 - 315 77463914 - RSP_0342 - putative ABC sugar transporter, inner membrane subunit 1950 71.65 0 2073607..2074650 - 347 77463915 - RSP_0343 - putative ABC sugar transporter, inner membrane subunit 1951 70.94 0 2074640..2076160 - 506 77463916 - RSP_0344 - putative ABC sugar transporter, fused ATPase subunits 1952 67.76 0 2076157..2077161 - 334 77463917 - RSP_0345 - ABC transporter periplasmic-binding protein 1953 67.57 0 2077432..2078532 + 366 77463918 - RSP_0346 - ABC transporter, substrate binding protein 1954 66.89 0 2078687..2079568 + 293 77463919 - RSP_0347 - ABC transporter, inner membrane subunit 1955 65.03 0 2079565..2080356 + 263 77463920 - RSP_0348 - ABC transporter, inner membrane subunit 1956 69.69 0 2080373..2081431 + 352 77463921 - RSP_0349 - ABC transporter, ATPase subunit 1957 69.39 0 2081485..2081925 + 146 77463922 - RSP_0350 - hypothetical protein 1958 70.05 0 2081929..2082993 + 354 77463923 - RSP_0351 - D-threo-aldose 1-dehydrogenase 1959 63.58 -1 2083151..2083474 - 107 77463924 - RSP_0352 - ferredoxin 1960 72.63 0 2084288..2084740 + 150 77463925 - RSP_0354 - hypothetical protein 1961 68.49 0 2084795..2086276 - 493 77463926 - RSP_0355 - serine protease 1962 70.97 0 2086429..2087451 - 340 77463927 - RSP_0356 - HflC protein 1963 69.20 0 2087451..2088632 - 393 77463928 - RSP_0357 - HflK protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0