version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1828 71.60 0 1943574..1944140 - 188 77463793 - RSP_6104 - calcium-binding protein 1829 72.29 0 1944352..1945401 + 349 77463794 - RSP_0226 - naringenin-chalcone synthase 1830 72.22 0 1945398..1945901 + 167 77463795 - RSP_0227 - hypothetical protein 1831 71.86 0 1945888..1947486 + 532 77463796 - RSP_0229 - multidrug efflux pump, MF superfamily 1832 73.69 +1 1947434..1948387 - 317 77463797 hmuS RSP_0228 - putative hemin transport protein 1833 67.86 0 1948474..1950069 - 531 77463798 - RSP_0230 - neutral zinc metallopeptidase 1834 67.65 0 1950102..1950509 - 135 77463799 - RSP_6105 - hypothetical protein 1835 71.93 0 1950647..1951747 - 366 77463800 motB RSP_0231 - flagellar MotB protein 1836 62.07 -1 1951757..1952518 - 253 77463801 motA RSP_0233 - flagellar motor protein MotA 1837 68.82 0 1953030..1954142 - 370 77463802 tlpL RSP_0234 - TlpL, putative cytoplasmic chemoreceptor 1838 76.32 +1 1954543..1954977 - 144 77463803 - RSP_6106 - hypothetical protein 1839 69.18 0 1955064..1956098 + 344 77463804 moaA RSP_0235 - molybdenum cofactor biosynthesis protein A 1840 72.10 0 1956381..1957724 - 447 77463805 - RSP_0236 - AgaE protein 1841 71.05 0 1957724..1958887 - 387 77463806 argE RSP_0237 - acetylornithine deacetylase 1842 69.08 0 1959022..1960305 - 427 77463807 - RSP_0238 - hypothetical protein 1843 66.67 0 1960590..1962038 - 482 77463808 PntB RSP_0239 - pyridine nucleotide transhydrogenase beta subunit 1844 67.11 0 1962049..1963620 - 523 77463809 pntA RSP_0240 - NAD(P) transhydrogenase subunit alpha 1845 73.30 +1 1963759..1964286 - 175 77463810 - RSP_0241 - S-isoprenylcysteine methyltransferase-like protein 1846 72.63 0 1964324..1965514 + 396 77463811 - RSP_0242 - kynureninase 1847 70.07 0 1965738..1966766 + 342 77463812 - RSP_0243 - putative lipoprotein 1848 70.33 0 1967154..1967999 - 281 77463813 - RSP_0244 - glutamine amidotransferase 1849 71.65 0 1968226..1969428 - 400 77463814 - RSP_0245 - Serine-pyruvate aminotransferase/aspartate aminotransferase 1850 69.66 0 1969599..1971371 + 590 77463815 - RSP_0246 - ABC lipid efflux transporter, fused ATPase and inner membrane subunits 1851 70.57 0 1971361..1972128 + 255 77463816 - RSP_0247 - aminomethyltransferase related to GcvT 1852 62.59 -1 1972274..1972837 - 187 77463817 - RSP_0248 - elongation factor P 1853 63.61 -1 1973046..1973372 + 108 77463818 - RSP_6107 - hypothetical protein 1854 70.58 0 1973791..1974531 - 246 77463819 - RSP_0250 - hypothetical protein 1855 69.24 0 1974662..1976062 - 466 77463820 - RSP_0251 - Outer membrane efflux protein 1856 66.51 0 1976110..1976763 - 217 77463821 - RSP_0252 - protein-L-isoaspartate carboxylmethyltransferase 1857 73.46 +1 1976931..1978313 + 460 77463822 - RSP_0253 - glycine/D-amino acid oxidase (deaminating) 1858 69.70 0 1978340..1980286 - 648 77463823 dxsA RSP_0254 - 1-deoxy-D-xylulose-5-phosphate synthase 1859 60.24 -2 1980460..1980708 - 82 77463824 pufX RSP_0255 - Intrinsic membrane pufX protien 1860 65.48 0 1980721..1981647 - 308 77463825 pufM RSP_0256 - photosynthetic reaction center subunit M 1861 62.07 -1 1981640..1982488 - 282 77463826 pufL RSP_0257 - PufL, photosynthetic reaction center L subunit 1862 56.50 -2 1982612..1982788 - 58 77463827 pufA RSP_0258 - LHI alpha, light-harvesting B875 protein 1863 58.00 -2 1982802..1982951 - 49 77463828 pufB RSP_6108 - LHI beta, light-harvesting B875 subunit 1864 57.14 -2 1982953..1983015 - 20 77463829 pufK RSP_6109 - transcriptional regulatory protein pufK 1865 66.24 0 1983082..1983315 - 77 77463830 pufQ RSP_0259 - protein pufQ 1866 66.06 0 1983312..1984787 - 491 77463831 bchZ RSP_0260 - putative chlorophyllide reductase, BchZ subunit 1867 70.84 0 1984787..1986295 - 502 77463832 bchY RSP_0261 - chlorophyllide reductase, BchY subunit 1868 65.97 0 1986371..1987372 - 333 77463833 bchX RSP_0262 - chlorophyllide reductase, BchX subunit 1869 69.91 0 1987369..1988325 - 318 77463834 bchC RSP_0263 - chlorophyll synthesis pathway, bchC 1870 71.58 0 1988478..1989617 - 379 77463835 crtF RSP_0264 - hydroxyneurosporene-O-methyltransferase 1871 71.86 0 1989670..1990536 - 288 77463836 crtE RSP_0265 - farnesyl-diphosphate synthase 1872 73.05 +1 1990681..1992168 + 495 77463837 crtD RSP_0266 - methoxyneurosporene dehydrogenase 1873 71.19 0 1992234..1993073 + 279 77463838 ctrC RSP_0267 - hydroxyneurosporene synthase 1874 65.83 0 1993234..1993710 - 158 77463839 tspO RSP_0269 - tryptophan rich sensory protein 1875 72.57 0 1993742..1994809 - 355 77463840 crtB RSP_0270 - phytoene synthase 1876 67.24 0 1994806..1996362 - 518 77463841 crtI RSP_0271 - phytoene dehydrogenase 1877 67.59 0 1996520..1997494 + 324 77463842 crtA RSP_0272 - spheroidene monooxygenase 1878 70.65 0 1997499..1998503 + 334 77463843 bchI RSP_0273 - magnesium chelatase subunit I 1879 76.52 +1 1998500..2000194 + 564 77463844 bchD RSP_0274 - magnesium chelatase subunit D 1880 71.40 0 2000197..2001063 + 288 77463845 bchO RSP_0275 - magnesium-chelatase, BchO 1881 68.35 0 2001312..2001845 - 177 77463846 - RSP_0276 - isopentenyl-diphosphate delta-isomerase 1882 67.43 0 2001848..2003032 - 394 77463847 bchP RSP_0277 - geranylgeranyl hydrogenase 1883 71.18 0 2003035..2004318 - 427 77463848 - RSP_0278 - putative light-harvesting 1 (B870) complex assembly protein PucC 1884 68.43 0 2004315..2005223 - 302 77463849 bchG RSP_0279 - bacteriochlorophyll/chlorophyll a synthase 1885 72.14 0 2005297..2005917 - 206 77463850 bchJ RSP_0280 - bacteriochlorophyll synthase, 23 kDa subunit (bchJ) 1886 65.04 0 2005924..2007762 - 612 77463851 bchE RSP_0281 - magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66 kDa subunit(bchE) 1887 68.03 0 2007910..2009304 - 464 77463852 ppsR RSP_0282 - transcriptional regulator PpsR 1888 68.05 0 2009363..2010157 - 264 77463853 ppaA RSP_0283 - regulatory protein, PpaA 1889 66.46 0 2010530..2011012 + 160 77463854 bchF RSP_0284 - 2-vinyl bacteriochlorophyllide hydratase 1890 71.87 0 2011009..2012295 + 428 77463855 bchN RSP_0285 - light-independent protochlorophyllide reductase subunit N 1891 68.66 0 2012366..2013970 + 534 77463856 bchB RSP_0286 - light-independent protochlorophyllide reductase subunit B 1892 68.98 0 2013960..2017541 + 1193 77463857 bchH RSP_0287 - magnesium chelatase subunit H 1893 64.65 0 2017603..2018496 + 297 77463858 chlL RSP_0288 - protochlorophyllide reductase iron-sulfur ATP-binding protein 1894 67.71 0 2018540..2019208 + 222 77463859 bchM RSP_0289 - Mg-protoporphyrin IX methyl transferase 1895 70.21 0 2019205..2020644 + 479 77463860 - RSP_0290 - light-harvesting 1 (B870) complex assembly 1896 66.79 0 2020663..2021445 + 260 77463861 puhA RSP_0291 - reaction centre H protein 1897 71.16 0 2021573..2022217 + 214 77463862 - RSP_0292 - hypothetical protein 1898 68.17 0 2022294..2022758 + 154 77463863 - RSP_0293 - hypothetical protein 1899 64.31 -1 2022780..2023076 + 98 77463864 - RSP_6110 - hypothetical protein 1900 64.84 0 2023073..2024164 + 363 77463865 - RSP_0294 - magnesium-protoporphyrin IX monomethyl ester cyclase 1901 68.73 0 2024226..2025098 + 290 77463866 - RSP_0295 - hypothetical protein 1902 64.38 -1 2025438..2025875 + 145 77463867 cycA RSP_0296 - cytochrome c2 1903 66.67 0 2026281..2026979 - 232 77463868 - RSP_0297 - ABC branched chain amino acid transporter, ATPase subunit 1904 67.07 0 2026976..2027719 - 247 77463869 - RSP_0298 - ABC branched chain amino acid transporter, ATPase subunit 1905 69.10 0 2027716..2028948 - 410 77463870 - RSP_0299 - ABC branched chain amino acid transporter, inner membrane subunit 1906 70.55 0 2029315..2031243 - 642 77463871 - RSP_0300 - ABC branched chain amino acid transporter, inner membrane subunit 1907 62.61 -1 2031307..2032587 - 426 77463872 - RSP_0301 - ABC branched chain amino acid transporter, substrate binding protein 1908 69.23 0 2032887..2033510 - 207 77463873 ureG RSP_0302 - urease accessory protein G 1909 74.88 +1 2033507..2034139 - 210 77463874 ureF RSP_0303 - urease accessory protein UreF 1910 71.22 0 2034136..2034684 - 182 77463875 ureE RSP_0304 - urease accessory protein UreE 1911 70.24 0 2034681..2035100 - 139 77463876 - RSP_0305 - hypothetical protein 1912 67.96 0 2035102..2036808 - 568 77463877 ureC RSP_6111 - urease subunit alpha 1913 69.76 0 2036968..2037840 + 290 77463878 - RSP_0306 - class I diheme cytochrome c 1914 72.01 0 2037896..2038213 - 105 77463879 - RSP_0307 - antifreeze protein, type I 1915 63.73 -1 2038238..2038543 - 101 77463880 ureB RSP_0308 - urease subunit beta 1916 65.02 0 2038594..2038896 - 100 77463881 ureA RSP_0309 - urease subunit gamma 1917 75.85 +1 2038908..2039735 - 275 77463882 ureD RSP_0310 - urease accessory protein UreD 1918 72.94 +1 2039862..2040977 + 371 77463883 - RSP_0311 - putative aminotransferase protein 1919 73.46 +1 2041012..2042322 + 436 77463884 - RSP_0312 - aminotransferase 1920 61.07 -1 2042383..2042757 + 124 77463885 - RSP_0313 - hypothetical protein 1921 63.46 -1 2042750..2042905 + 51 77463886 pucB RSP_0314 - LHII beta, light-harvesting B800/850 protein 1922 63.64 -1 2042921..2043085 + 54 77463887 pucA RSP_6256 - LHII alpha, light-harvesting B800/850 protein 1923 69.20 0 2043280..2044659 + 459 77463888 pucC RSP_0315 - light-harvesting 1 (B870) complex assembly 1924 66.20 0 2045159..2045800 + 213 77463889 - RSP_0316 - LuxR family transcriptional regulator 1925 66.96 0 2045850..2047208 - 452 77463890 hemN RSP_0317 - coproporphyrinogen III oxidase 1926 71.70 0 2047282..2047977 - 231 77463891 - RSP_0318 - hypothetical protein 1927 68.47 0 2047974..2048195 - 73 77463892 - RSP_0319 - NnrU 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0