version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1778 68.56 0 1889397..1890242 - 281 77463743 - RSP_0173 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase 1779 71.12 0 1890252..1890992 - 246 77463744 ucpA RSP_0174 - short-chain dehydrogenase 1780 70.81 0 1891185..1892126 + 313 77463745 - RSP_0175 - lactate dehydrogenase and related dehydrogenase 1781 69.42 0 1892163..1893944 - 593 77463746 - RSP_0176 - dihydroxy-acid dehydratase 1782 70.93 0 1894242..1895624 + 460 77463747 - RSP_0177 - FAD/FMN-containing dehydrogenase 1783 66.16 0 1895669..1896649 - 326 77463748 - RSP_0179 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA 1784 67.84 0 1896679..1897530 - 283 77463749 - RSP_0180 - ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit 1785 68.70 0 1897527..1898462 - 311 77463750 - RSP_0181 - ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit 1786 66.87 0 1899372..1900823 - 483 161723328 dht RSP_0183 - dihydropyrimidinase 1787 70.32 0 1900952..1902211 - 419 77463752 - RSP_0184 - allantoate amidohydrolase 1788 65.72 0 1902349..1902981 + 210 77463753 - RSP_0185 - TetR family transcriptional regulator 1789 65.85 0 1903171..1903782 + 203 77463754 - RSP_0186 - TetR family transcriptional regulator 1790 66.51 0 1903823..1905127 - 434 77463755 - RSP_0187 - dihydropyrimidine dehydrogenase 1791 66.85 0 1905200..1905739 - 179 77463756 - RSP_0188 - hypothetical protein 1792 70.85 0 1905803..1907140 - 445 77463757 - RSP_0189 - putative oxidoreductase 1793 68.56 0 1907274..1907906 + 210 77463758 accB RSP_0190 - biotin carboxyl carrier protein 1794 66.07 0 1907914..1909260 + 448 77463759 accC RSP_0191 - acetyl-CoA carboxylase biotin carboxylase subunit 1795 68.99 0 1909280..1909924 + 214 77463760 aat RSP_0192 - leucyl/phenylalanyl-tRNA--protein transferase 1796 70.16 0 1909873..1910244 - 123 77463761 - RSP_0193 - hypothetical protein 1797 66.88 0 1910241..1910711 - 156 77463762 - RSP_0194 - ABC transporter substrate-binding protein 1798 66.40 0 1910711..1911085 - 124 77463763 - RSP_0195 - NADH dehydrogenase 1799 63.19 -1 1911210..1912475 - 421 77463764 clpX RSP_0196 - ATP-dependent protease ATP-binding subunit 1800 63.35 -1 1912600..1913232 - 210 77463765 clpP RSP_0197 - ATP-dependent Clp protease proteolytic subunit ClpP 1801 69.46 0 1913399..1914007 - 202 77463766 - RSP_0198 - phosphatidylglycerophosphate synthase 1802 70.23 0 1914123..1915328 + 401 77463767 - RSP_0200 - hypothetical protein 1803 74.07 +1 1915325..1917013 + 562 77463768 - RSP_0201 - ABC transporter, fused inner membrane subunits 1804 73.02 +1 1917010..1917654 + 214 77463769 - RSP_6101 - ABC transporter, ATPase subunit 1805 74.73 +1 1917787..1918257 + 156 77463770 - RSP_0202 - hypothetical protein 1806 69.39 0 1918334..1919653 - 439 77463771 - RSP_0203 - signal transduction kinase protein 1807 72.48 0 1919694..1920605 + 303 77463772 - RSP_0204 - metallo-beta-lactamase family protein 1808 58.22 -2 1920763..1921188 + 141 77463773 - RSP_0205 - hypothetical protein 1809 63.12 -1 1921201..1921707 - 168 77463774 - RSP_0206 - hypothetical protein 1810 68.05 0 1921743..1922249 - 168 77463775 - RSP_0207 - hypothetical protein 1811 69.59 0 1922251..1923312 - 353 77463776 - RSP_0208 - hypothetical protein 1812 70.99 0 1923314..1923868 - 184 77463777 - RSP_0209 - prophage Lp3 protein 18 1813 70.20 0 1923868..1925028 - 386 77463778 - RSP_0211 - hypothetical protein 1814 67.25 0 1925115..1925456 - 113 77463779 - RSP_0212 - HNH nuclease 1815 69.63 0 1925447..1927102 - 551 77463780 - RSP_0213 - Phage terminase-like protein large subunit 1816 65.36 0 1927099..1927404 - 101 77463781 - RSP_0214 - phage protein 1817 67.26 0 1927567..1928904 - 445 77463782 - RSP_0215 - hypothetical protein 1818 62.91 -1 1929125..1929337 - 70 77463783 - RSP_0216 - hypothetical protein 1819 58.89 -2 1929613..1930242 - 209 77463784 - RSP_6102 - hypothetical protein 1820 68.84 0 1930262..1931503 - 413 77463785 int RSP_0217 - phage-related integrase 1821 70.16 0 1932095..1934158 - 687 77463786 mcpM RSP_0218 - methyl accepting chemotaxis protein 1822 61.85 -1 1934696..1934944 + 82 77463787 - RSP_0219 - hypothetical protein 1823 69.52 0 1935301..1935510 + 69 77463788 - RSP_0220 - hypothetical protein 1824 68.52 0 1935581..1936066 + 161 77463789 - RSP_6103 - hypothetical protein 1825 57.25 -2 1936160..1938697 + 845 77463790 - RSP_0221 - plasma membrane H+-transporting two-sector ATPase, C subunit 1826 58.57 -2 1938711..1939982 + 423 77463791 - RSP_0223 - hypothetical protein 1827 56.86 -2 1939988..1942159 + 723 77463792 - RSP_0224 - ATP-dependent helicase 1828 71.60 0 1943574..1944140 - 188 77463793 - RSP_6104 - calcium-binding protein 1829 72.29 0 1944352..1945401 + 349 77463794 - RSP_0226 - naringenin-chalcone synthase 1830 72.22 0 1945398..1945901 + 167 77463795 - RSP_0227 - hypothetical protein 1831 71.86 0 1945888..1947486 + 532 77463796 - RSP_0229 - multidrug efflux pump, MF superfamily 1832 73.69 +1 1947434..1948387 - 317 77463797 hmuS RSP_0228 - putative hemin transport protein 1833 67.86 0 1948474..1950069 - 531 77463798 - RSP_0230 - neutral zinc metallopeptidase 1834 67.65 0 1950102..1950509 - 135 77463799 - RSP_6105 - hypothetical protein 1835 71.93 0 1950647..1951747 - 366 77463800 motB RSP_0231 - flagellar MotB protein 1836 62.07 -1 1951757..1952518 - 253 77463801 motA RSP_0233 - flagellar motor protein MotA 1837 68.82 0 1953030..1954142 - 370 77463802 tlpL RSP_0234 - TlpL, putative cytoplasmic chemoreceptor 1838 76.32 +1 1954543..1954977 - 144 77463803 - RSP_6106 - hypothetical protein 1839 69.18 0 1955064..1956098 + 344 77463804 moaA RSP_0235 - molybdenum cofactor biosynthesis protein A 1840 72.10 0 1956381..1957724 - 447 77463805 - RSP_0236 - AgaE protein 1841 71.05 0 1957724..1958887 - 387 77463806 argE RSP_0237 - acetylornithine deacetylase 1842 69.08 0 1959022..1960305 - 427 77463807 - RSP_0238 - hypothetical protein 1843 66.67 0 1960590..1962038 - 482 77463808 PntB RSP_0239 - pyridine nucleotide transhydrogenase beta subunit 1844 67.11 0 1962049..1963620 - 523 77463809 pntA RSP_0240 - NAD(P) transhydrogenase subunit alpha 1845 73.30 +1 1963759..1964286 - 175 77463810 - RSP_0241 - S-isoprenylcysteine methyltransferase-like protein 1846 72.63 0 1964324..1965514 + 396 77463811 - RSP_0242 - kynureninase 1847 70.07 0 1965738..1966766 + 342 77463812 - RSP_0243 - putative lipoprotein 1848 70.33 0 1967154..1967999 - 281 77463813 - RSP_0244 - glutamine amidotransferase 1849 71.65 0 1968226..1969428 - 400 77463814 - RSP_0245 - Serine-pyruvate aminotransferase/aspartate aminotransferase 1850 69.66 0 1969599..1971371 + 590 77463815 - RSP_0246 - ABC lipid efflux transporter, fused ATPase and inner membrane subunits 1851 70.57 0 1971361..1972128 + 255 77463816 - RSP_0247 - aminomethyltransferase related to GcvT 1852 62.59 -1 1972274..1972837 - 187 77463817 - RSP_0248 - elongation factor P 1853 63.61 -1 1973046..1973372 + 108 77463818 - RSP_6107 - hypothetical protein 1854 70.58 0 1973791..1974531 - 246 77463819 - RSP_0250 - hypothetical protein 1855 69.24 0 1974662..1976062 - 466 77463820 - RSP_0251 - Outer membrane efflux protein 1856 66.51 0 1976110..1976763 - 217 77463821 - RSP_0252 - protein-L-isoaspartate carboxylmethyltransferase 1857 73.46 +1 1976931..1978313 + 460 77463822 - RSP_0253 - glycine/D-amino acid oxidase (deaminating) 1858 69.70 0 1978340..1980286 - 648 77463823 dxsA RSP_0254 - 1-deoxy-D-xylulose-5-phosphate synthase 1859 60.24 -2 1980460..1980708 - 82 77463824 pufX RSP_0255 - Intrinsic membrane pufX protien 1860 65.48 0 1980721..1981647 - 308 77463825 pufM RSP_0256 - photosynthetic reaction center subunit M 1861 62.07 -1 1981640..1982488 - 282 77463826 pufL RSP_0257 - PufL, photosynthetic reaction center L subunit 1862 56.50 -2 1982612..1982788 - 58 77463827 pufA RSP_0258 - LHI alpha, light-harvesting B875 protein 1863 58.00 -2 1982802..1982951 - 49 77463828 pufB RSP_6108 - LHI beta, light-harvesting B875 subunit 1864 57.14 -2 1982953..1983015 - 20 77463829 pufK RSP_6109 - transcriptional regulatory protein pufK 1865 66.24 0 1983082..1983315 - 77 77463830 pufQ RSP_0259 - protein pufQ 1866 66.06 0 1983312..1984787 - 491 77463831 bchZ RSP_0260 - putative chlorophyllide reductase, BchZ subunit 1867 70.84 0 1984787..1986295 - 502 77463832 bchY RSP_0261 - chlorophyllide reductase, BchY subunit 1868 65.97 0 1986371..1987372 - 333 77463833 bchX RSP_0262 - chlorophyllide reductase, BchX subunit 1869 69.91 0 1987369..1988325 - 318 77463834 bchC RSP_0263 - chlorophyll synthesis pathway, bchC 1870 71.58 0 1988478..1989617 - 379 77463835 crtF RSP_0264 - hydroxyneurosporene-O-methyltransferase 1871 71.86 0 1989670..1990536 - 288 77463836 crtE RSP_0265 - farnesyl-diphosphate synthase 1872 73.05 +1 1990681..1992168 + 495 77463837 crtD RSP_0266 - methoxyneurosporene dehydrogenase 1873 71.19 0 1992234..1993073 + 279 77463838 ctrC RSP_0267 - hydroxyneurosporene synthase 1874 65.83 0 1993234..1993710 - 158 77463839 tspO RSP_0269 - tryptophan rich sensory protein 1875 72.57 0 1993742..1994809 - 355 77463840 crtB RSP_0270 - phytoene synthase 1876 67.24 0 1994806..1996362 - 518 77463841 crtI RSP_0271 - phytoene dehydrogenase 1877 67.59 0 1996520..1997494 + 324 77463842 crtA RSP_0272 - spheroidene monooxygenase 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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