version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1710 71.94 0 1815064..1815537 + 157 77463675 nuoE RSP_0103 - NADH dehydrogenase subunit E 1711 72.74 0 1815534..1816784 + 416 77463676 nuoF RSP_0104 - respiratory-chain NADH dehydrogenase, 51 kDa subunit 1712 74.91 +1 1816781..1819363 + 860 77463677 nuoG RSP_0105 - NADH dehydrogenase subunit G 1713 69.80 0 1819560..1820516 + 318 77463678 nuoH RSP_0106 - putative NADH dehydrogenase I chain H 1714 66.87 0 1820513..1821007 + 164 77463679 nuoI RSP_0107 - NADH dehydrogenase subunit I 1715 74.95 +1 1821004..1821498 + 164 77463680 nuoJ RSP_0108 - NADH dehydrogenase I chain J 1716 68.61 0 1821495..1821803 + 102 77463681 nuoK RSP_0109 - putative NADH dehydrogenase I chain K 1717 70.04 0 1821805..1823907 + 700 77463682 nuoL RSP_0110 - NADH-ubiquinone oxidoreductase, chain 5 1718 73.81 +1 1825347..1826690 + 447 77463683 nuoN RSP_0112 - NADH-ubiquinone oxidoreductase, chain 4 1719 68.80 0 1826723..1828219 + 498 77463684 - RSP_0113 - phospholipase D/transphosphatidylase 1720 69.86 0 1828216..1828560 + 114 77463685 - RSP_0114 - hypothetical protein 1721 74.06 +1 1828582..1829826 - 414 77463686 - RSP_0115 - class I triheme cytochrome c 1722 66.42 0 1829852..1830259 - 135 77463687 - RSP_0116 - hypothetical protein 1723 68.18 0 1830270..1832843 - 857 77463688 - RSP_0117 - cytochrome c oxidase, subunit I 1724 70.56 0 1832840..1833814 - 324 77463689 - RSP_0118 - cytochrome c oxidase, subunit IIC 1725 68.22 0 1834149..1834919 - 256 77463690 - RSP_0119 - PA-phosphatase related phosphoesterase 1726 63.56 -1 1835172..1835654 - 160 77463691 - RSP_6095 - transcriptional activator 1727 63.64 -1 1835702..1836361 + 219 77463692 - RSP_6096 - LuxR family transcriptional regulator 1728 66.95 0 1836472..1837173 + 233 77463693 cerR RSP_0122 - LuxR family transcriptional regulator 1729 53.46 -2 1837195..1837353 + 52 77463694 cerA RSP_6213 - community escape response protein 1730 63.98 -1 1837350..1837982 + 210 77463695 cerI RSP_0123 - autoinducer synthesis protein 1731 72.16 0 1838097..1838369 + 90 77463696 - RSP_0124 - hypothetical protein 1732 67.28 0 1838690..1840312 + 540 77463697 mdoG RSP_0125 - glucan biosynthesis protein G 1733 68.66 0 1840312..1840512 + 66 77463698 - RSP_0126 - hypothetical protein 1734 68.12 0 1840516..1842303 + 595 77463699 opgH RSP_0127 - glucosyltransferase MdoH 1735 66.08 0 1842296..1843495 + 399 77463700 opgC RSP_0128 - OpgC protein 1736 70.15 0 1844020..1845081 + 353 77463701 metN RSP_0129 - ABC D-methionine uptake transporter, ATPase subunit 1737 69.63 0 1845071..1845745 + 224 77463702 metI RSP_0130 - ABC D-methionine uptake transporter, inner membrane subunit 1738 64.35 -1 1845774..1846550 + 258 77463703 metQ RSP_0132 - ABC D-methionine uptake transporter, substrate-binding protein 1739 67.14 0 1846786..1848276 + 496 77463704 - RSP_0133 - NahC family Na(+)/H(+) antiporter 1740 71.58 0 1849400..1849684 + 94 77463705 - RSP_0134 - hypothetical protein 1741 68.33 0 1849677..1851116 + 479 77463706 - RSP_0135 - hypothetical protein 1742 67.15 0 1851235..1852068 + 277 77463707 - RSP_0136 - putative integrase for prophage CP-933U 1743 58.62 -2 1852329..1853036 - 235 77463708 - RSP_0137 - hypothetical protein 1744 65.53 0 1853174..1853524 - 116 77463709 - RSP_0138 - hypothetical protein 1745 63.41 -1 1854206..1854604 + 132 77463710 rpsF RSP_0139 - 30S ribosomal protein S6 1746 64.04 -1 1854625..1854852 + 75 77463711 rpsR RSP_0140 - 30S ribosomal protein S18 1747 66.14 0 1854865..1855434 + 189 77463712 rplI RSP_0141 - 50S ribosomal protein L9 1748 64.72 0 1855758..1857092 - 444 77463713 tig RSP_0142 - trigger factor 1749 72.82 0 1857400..1857870 + 156 77463714 - RSP_6097 - hypothetical protein 1750 63.42 -1 1859643..1859981 + 112 77463715 glnB RSP_0146 - nitrogen regulatory protein P-II 1751 63.19 -1 1860063..1861472 + 469 77463716 glnA RSP_0147 - L-glutamine synthetase 1752 69.42 0 1861665..1862717 - 350 77463717 - RSP_0148 - Signal transduction histidine kinase 1753 59.82 -2 1862714..1863151 - 145 77463718 - RSP_0149 - CheY-like receiver protein 1754 67.81 0 1863148..1864632 - 494 77463719 - RSP_0150 - multi-sensor signal transduction histidine kinase 1755 69.21 0 1864928..1866067 + 379 77463720 - RSP_0152 - P-loop ATPase 1756 72.31 0 1866064..1867374 + 436 77463721 - RSP_0151 - hypothetical protein 1757 69.62 0 1867577..1868254 - 225 77463722 - RSP_0153 - hypothetical protein 1758 71.59 0 1868401..1869273 - 290 77463723 - RSP_0154 - 3-hydroxyisobutyrate dehydrogenase 1759 71.80 0 1869270..1870301 - 343 77463724 - RSP_0155 - enoyl-CoA hydratase 1760 68.33 0 1870298..1871437 - 379 77463725 - RSP_0156 - Acyl-CoA dehydrogenase 1761 70.41 0 1871561..1871854 - 97 77463726 - RSP_6098 - hypothetical protein 1762 67.78 0 1872062..1872961 - 299 77463727 - RSP_0157 - Beta-mannanase 1763 69.64 0 1872975..1874858 - 627 77463728 - RSP_0158 - cellulose synthase-like protein 1764 70.80 0 1874842..1875834 - 330 77463729 galE-2 RSP_0159 - UDP-galactose 4-epimerase 1765 66.28 0 1875827..1876864 - 345 77463730 - RSP_0160 - NAD-dependent epimerase/dehydratase family protein 1766 66.39 0 1877726..1878826 + 366 77463731 - RSP_0161 - spermidine/putrescine-binding periplasmic protein 1767 66.67 0 1878943..1879134 + 63 77463732 - RSP_0162 - hypothetical protein 1768 70.85 0 1879205..1880878 - 557 77463733 - RSP_0163 - putative iron(III) ABC transporter, fused inner membrane subunits 1769 61.96 -1 1881031..1881285 - 84 77463734 - RSP_0164 - hypothetical protein 1770 67.59 0 1881422..1881637 + 71 77463735 - RSP_0165 - hypothetical protein 1771 65.41 0 1882044..1882361 - 105 77463736 dksA RSP_0166 - DnaK suppressor protein 1772 71.53 0 1882687..1883118 + 143 77463737 - RSP_0167 - hypothetical protein 1773 72.74 0 1883377..1884348 - 323 77463738 - RSP_6099 - flagellar switch protein FliM 1774 68.79 0 1884473..1887157 - 894 77463739 - RSP_0169 - Na+/solute symporter 1775 74.23 +1 1887157..1887447 - 96 77463740 - RSP_0170 - hypothetical protein 1776 66.67 0 1887444..1887812 - 122 77463741 - RSP_0171 - response regulator receiver protein 1777 74.90 +1 1887974..1889260 - 428 77463742 - RSP_0172 - transcriptional regulator 1778 68.56 0 1889397..1890242 - 281 77463743 - RSP_0173 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase 1779 71.12 0 1890252..1890992 - 246 77463744 ucpA RSP_0174 - short-chain dehydrogenase 1780 70.81 0 1891185..1892126 + 313 77463745 - RSP_0175 - lactate dehydrogenase and related dehydrogenase 1781 69.42 0 1892163..1893944 - 593 77463746 - RSP_0176 - dihydroxy-acid dehydratase 1782 70.93 0 1894242..1895624 + 460 77463747 - RSP_0177 - FAD/FMN-containing dehydrogenase 1783 66.16 0 1895669..1896649 - 326 77463748 - RSP_0179 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA 1784 67.84 0 1896679..1897530 - 283 77463749 - RSP_0180 - ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit 1785 68.70 0 1897527..1898462 - 311 77463750 - RSP_0181 - ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit 1786 66.87 0 1899372..1900823 - 483 161723328 dht RSP_0183 - dihydropyrimidinase 1787 70.32 0 1900952..1902211 - 419 77463752 - RSP_0184 - allantoate amidohydrolase 1788 65.72 0 1902349..1902981 + 210 77463753 - RSP_0185 - TetR family transcriptional regulator 1789 65.85 0 1903171..1903782 + 203 77463754 - RSP_0186 - TetR family transcriptional regulator 1790 66.51 0 1903823..1905127 - 434 77463755 - RSP_0187 - dihydropyrimidine dehydrogenase 1791 66.85 0 1905200..1905739 - 179 77463756 - RSP_0188 - hypothetical protein 1792 70.85 0 1905803..1907140 - 445 77463757 - RSP_0189 - putative oxidoreductase 1793 68.56 0 1907274..1907906 + 210 77463758 accB RSP_0190 - biotin carboxyl carrier protein 1794 66.07 0 1907914..1909260 + 448 77463759 accC RSP_0191 - acetyl-CoA carboxylase biotin carboxylase subunit 1795 68.99 0 1909280..1909924 + 214 77463760 aat RSP_0192 - leucyl/phenylalanyl-tRNA--protein transferase 1796 70.16 0 1909873..1910244 - 123 77463761 - RSP_0193 - hypothetical protein 1797 66.88 0 1910241..1910711 - 156 77463762 - RSP_0194 - ABC transporter substrate-binding protein 1798 66.40 0 1910711..1911085 - 124 77463763 - RSP_0195 - NADH dehydrogenase 1799 63.19 -1 1911210..1912475 - 421 77463764 clpX RSP_0196 - ATP-dependent protease ATP-binding subunit 1800 63.35 -1 1912600..1913232 - 210 77463765 clpP RSP_0197 - ATP-dependent Clp protease proteolytic subunit ClpP 1801 69.46 0 1913399..1914007 - 202 77463766 - RSP_0198 - phosphatidylglycerophosphate synthase 1802 70.23 0 1914123..1915328 + 401 77463767 - RSP_0200 - hypothetical protein 1803 74.07 +1 1915325..1917013 + 562 77463768 - RSP_0201 - ABC transporter, fused inner membrane subunits 1804 73.02 +1 1917010..1917654 + 214 77463769 - RSP_6101 - ABC transporter, ATPase subunit 1805 74.73 +1 1917787..1918257 + 156 77463770 - RSP_0202 - hypothetical protein 1806 69.39 0 1918334..1919653 - 439 77463771 - RSP_0203 - signal transduction kinase protein 1807 72.48 0 1919694..1920605 + 303 77463772 - RSP_0204 - metallo-beta-lactamase family protein 1808 58.22 -2 1920763..1921188 + 141 77463773 - RSP_0205 - hypothetical protein 1809 63.12 -1 1921201..1921707 - 168 77463774 - RSP_0206 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0