version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1669 68.32 0 1769454..1770359 + 301 77463634 fliP RSP_0063 - flagellar biosynthesis protein FliP 1670 62.55 -1 1770359..1770625 + 88 77463635 fliQ RSP_0064 - flagellar protein FliQ 1671 71.85 0 1770625..1771434 + 269 77463636 fliR RSP_0065 - flagellar protein FliR 1672 69.64 0 1771421..1772563 + 380 77463637 flhB RSP_0066 - flagellar protein FlhB 1673 73.33 +1 1772617..1773336 + 239 77463638 - RSP_0067 - hypothetical protein 1674 75.93 +1 1773344..1774012 + 222 77463639 - RSP_6092 - hypothetical protein 1675 69.89 0 1774019..1775353 - 444 77463640 rpoN2 RSP_0068 - sigma-54 factor (RpoN2) 1676 65.92 0 1775529..1777010 - 493 77463641 fliC RSP_0069 - flagellar filament protein 1677 68.48 0 1777249..1778904 + 551 77463642 fliD RSP_0070 - flagellar hook-associated protein 2 (filament cap protein) 1678 68.54 0 1778935..1780164 - 409 77463643 fleQ RSP_0071 - sigma-54 dependent trancsriptional regulator 1679 73.68 +1 1780189..1780986 - 265 77463644 - RSP_0072 - invasion protein 1680 72.11 0 1780993..1782222 - 409 77463645 flgL RSP_0073 - flagellar hook-associated protein 3 FlgL 1681 74.58 +1 1782230..1786321 - 1363 77463646 flgK1 RSP_0074 - FlgK flagellar hook-associated protein 1 1682 69.97 0 1786429..1786731 - 100 77463647 flgJ RSP_6093 - hypothetical protein 1683 70.16 0 1786731..1787846 - 371 77463648 flgI RSP_0076 - flagellar basal body P-ring protein 1684 68.91 0 1787843..1788511 - 222 77463649 flgH RSP_0077 - flagellar L-ring protein 1685 65.02 0 1788519..1789307 - 262 77463650 flgG RSP_0078 - flagellar distal rod protein 1686 71.96 0 1789361..1790116 - 251 77463651 flgF RSP_0079 - flagellar proximal rod protein FlgF 1687 69.89 0 1790125..1791396 - 423 77463652 flgE RSP_0080 - flagellar hook protein FlgE 1688 69.64 0 1791421..1792092 - 223 77463653 flgD RSP_0081 - flagellar scaffolding protein FlgD 1689 69.06 0 1792094..1792510 - 138 77463654 flgC RSP_0082 - flagellar basal-body rod protein FlgC 1690 68.22 0 1792510..1792896 - 128 77463655 flgB RSP_0083 - flagellar proximal rod protein FlgB 1691 75.66 +1 1792986..1794152 + 388 77463656 - RSP_0084 - hypothetical protein 1692 68.88 0 1794433..1797099 - 888 77463657 - RSP_0085 - PAS/PAC sensor hybrid histidine kinase 1693 67.05 0 1797096..1797623 - 175 77463658 - RSP_0086 - hypothetical protein 1694 62.40 -1 1797908..1798540 + 210 77463659 - RSP_0087 - two component transcriptional regulator, LuxR 1695 64.27 -1 1798734..1799234 - 166 77463660 - RSP_0088 - ycfI, putative structural proteins 1696 70.45 0 1799406..1800092 + 228 77463661 - RSP_0089 - hypothetical protein 1697 68.03 0 1800089..1801042 + 317 77463662 smoC RSP_0090 - operon regulator SmoC 1698 65.98 0 1801150..1802460 + 436 77463663 smoE RSP_0091 - ABC sorbitol/mannitol transporter, periplasmic binding protein 1699 63.80 -1 1802562..1803434 + 290 77463664 smoF RSP_0092 - ABC sorbitol/mannitol transporter, inner membrane subunit 1700 64.14 -1 1803436..1804266 + 276 77463665 smoG RSP_0093 - ABC sorbitol/mannitol transporter, inner membrane subunit 1701 66.87 0 1804274..1805272 + 332 77463666 smoK RSP_0094 - ABC sorbitol/mannitol transporter, ATPase subunit 1702 69.65 0 1805274..1806044 + 256 77463667 smoS RSP_0095 - sorbitol dehydrogenase 1703 68.90 0 1806098..1807531 + 477 77463668 mtlK RSP_0096 - mannitol dehydrogenase 1704 64.94 0 1808034..1809131 + 365 77463669 smoM RSP_0097 - TRAP-T family sorbitol/mannitol periplasmic binding protein SmoM 1705 69.74 0 1809282..1811330 - 682 77463670 - RSP_6094 - TRAP dicarboxylate family transporter DctM subunit 1706 63.74 -1 1811327..1811941 - 204 77463671 - RSP_0099 - TRAP dicarboxylate family transporter DctQ subunit 1707 71.06 0 1812328..1812714 + 128 77463672 nuoA RSP_0100 - putative NADH dehydrogenase I chain A 1708 70.06 0 1812711..1813328 + 205 77463673 nuoB RSP_0101 - NADH dehydrogenase (ubiquinone), 20 kDa subunit 1709 68.10 0 1813325..1815067 + 580 77463674 nuoCD RSP_0102 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1710 71.94 0 1815064..1815537 + 157 77463675 nuoE RSP_0103 - NADH dehydrogenase subunit E 1711 72.74 0 1815534..1816784 + 416 77463676 nuoF RSP_0104 - respiratory-chain NADH dehydrogenase, 51 kDa subunit 1712 74.91 +1 1816781..1819363 + 860 77463677 nuoG RSP_0105 - NADH dehydrogenase subunit G 1713 69.80 0 1819560..1820516 + 318 77463678 nuoH RSP_0106 - putative NADH dehydrogenase I chain H 1714 66.87 0 1820513..1821007 + 164 77463679 nuoI RSP_0107 - NADH dehydrogenase subunit I 1715 74.95 +1 1821004..1821498 + 164 77463680 nuoJ RSP_0108 - NADH dehydrogenase I chain J 1716 68.61 0 1821495..1821803 + 102 77463681 nuoK RSP_0109 - putative NADH dehydrogenase I chain K 1717 70.04 0 1821805..1823907 + 700 77463682 nuoL RSP_0110 - NADH-ubiquinone oxidoreductase, chain 5 1718 73.81 +1 1825347..1826690 + 447 77463683 nuoN RSP_0112 - NADH-ubiquinone oxidoreductase, chain 4 1719 68.80 0 1826723..1828219 + 498 77463684 - RSP_0113 - phospholipase D/transphosphatidylase 1720 69.86 0 1828216..1828560 + 114 77463685 - RSP_0114 - hypothetical protein 1721 74.06 +1 1828582..1829826 - 414 77463686 - RSP_0115 - class I triheme cytochrome c 1722 66.42 0 1829852..1830259 - 135 77463687 - RSP_0116 - hypothetical protein 1723 68.18 0 1830270..1832843 - 857 77463688 - RSP_0117 - cytochrome c oxidase, subunit I 1724 70.56 0 1832840..1833814 - 324 77463689 - RSP_0118 - cytochrome c oxidase, subunit IIC 1725 68.22 0 1834149..1834919 - 256 77463690 - RSP_0119 - PA-phosphatase related phosphoesterase 1726 63.56 -1 1835172..1835654 - 160 77463691 - RSP_6095 - transcriptional activator 1727 63.64 -1 1835702..1836361 + 219 77463692 - RSP_6096 - LuxR family transcriptional regulator 1728 66.95 0 1836472..1837173 + 233 77463693 cerR RSP_0122 - LuxR family transcriptional regulator 1729 53.46 -2 1837195..1837353 + 52 77463694 cerA RSP_6213 - community escape response protein 1730 63.98 -1 1837350..1837982 + 210 77463695 cerI RSP_0123 - autoinducer synthesis protein 1731 72.16 0 1838097..1838369 + 90 77463696 - RSP_0124 - hypothetical protein 1732 67.28 0 1838690..1840312 + 540 77463697 mdoG RSP_0125 - glucan biosynthesis protein G 1733 68.66 0 1840312..1840512 + 66 77463698 - RSP_0126 - hypothetical protein 1734 68.12 0 1840516..1842303 + 595 77463699 opgH RSP_0127 - glucosyltransferase MdoH 1735 66.08 0 1842296..1843495 + 399 77463700 opgC RSP_0128 - OpgC protein 1736 70.15 0 1844020..1845081 + 353 77463701 metN RSP_0129 - ABC D-methionine uptake transporter, ATPase subunit 1737 69.63 0 1845071..1845745 + 224 77463702 metI RSP_0130 - ABC D-methionine uptake transporter, inner membrane subunit 1738 64.35 -1 1845774..1846550 + 258 77463703 metQ RSP_0132 - ABC D-methionine uptake transporter, substrate-binding protein 1739 67.14 0 1846786..1848276 + 496 77463704 - RSP_0133 - NahC family Na(+)/H(+) antiporter 1740 71.58 0 1849400..1849684 + 94 77463705 - RSP_0134 - hypothetical protein 1741 68.33 0 1849677..1851116 + 479 77463706 - RSP_0135 - hypothetical protein 1742 67.15 0 1851235..1852068 + 277 77463707 - RSP_0136 - putative integrase for prophage CP-933U 1743 58.62 -2 1852329..1853036 - 235 77463708 - RSP_0137 - hypothetical protein 1744 65.53 0 1853174..1853524 - 116 77463709 - RSP_0138 - hypothetical protein 1745 63.41 -1 1854206..1854604 + 132 77463710 rpsF RSP_0139 - 30S ribosomal protein S6 1746 64.04 -1 1854625..1854852 + 75 77463711 rpsR RSP_0140 - 30S ribosomal protein S18 1747 66.14 0 1854865..1855434 + 189 77463712 rplI RSP_0141 - 50S ribosomal protein L9 1748 64.72 0 1855758..1857092 - 444 77463713 tig RSP_0142 - trigger factor 1749 72.82 0 1857400..1857870 + 156 77463714 - RSP_6097 - hypothetical protein 1750 63.42 -1 1859643..1859981 + 112 77463715 glnB RSP_0146 - nitrogen regulatory protein P-II 1751 63.19 -1 1860063..1861472 + 469 77463716 glnA RSP_0147 - L-glutamine synthetase 1752 69.42 0 1861665..1862717 - 350 77463717 - RSP_0148 - Signal transduction histidine kinase 1753 59.82 -2 1862714..1863151 - 145 77463718 - RSP_0149 - CheY-like receiver protein 1754 67.81 0 1863148..1864632 - 494 77463719 - RSP_0150 - multi-sensor signal transduction histidine kinase 1755 69.21 0 1864928..1866067 + 379 77463720 - RSP_0152 - P-loop ATPase 1756 72.31 0 1866064..1867374 + 436 77463721 - RSP_0151 - hypothetical protein 1757 69.62 0 1867577..1868254 - 225 77463722 - RSP_0153 - hypothetical protein 1758 71.59 0 1868401..1869273 - 290 77463723 - RSP_0154 - 3-hydroxyisobutyrate dehydrogenase 1759 71.80 0 1869270..1870301 - 343 77463724 - RSP_0155 - enoyl-CoA hydratase 1760 68.33 0 1870298..1871437 - 379 77463725 - RSP_0156 - Acyl-CoA dehydrogenase 1761 70.41 0 1871561..1871854 - 97 77463726 - RSP_6098 - hypothetical protein 1762 67.78 0 1872062..1872961 - 299 77463727 - RSP_0157 - Beta-mannanase 1763 69.64 0 1872975..1874858 - 627 77463728 - RSP_0158 - cellulose synthase-like protein 1764 70.80 0 1874842..1875834 - 330 77463729 galE-2 RSP_0159 - UDP-galactose 4-epimerase 1765 66.28 0 1875827..1876864 - 345 77463730 - RSP_0160 - NAD-dependent epimerase/dehydratase family protein 1766 66.39 0 1877726..1878826 + 366 77463731 - RSP_0161 - spermidine/putrescine-binding periplasmic protein 1767 66.67 0 1878943..1879134 + 63 77463732 - RSP_0162 - hypothetical protein 1768 70.85 0 1879205..1880878 - 557 77463733 - RSP_0163 - putative iron(III) ABC transporter, fused inner membrane subunits 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0