version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1559 66.74 0 1648123..1650981 - 952 77463524 uvrA RSP_2966 - excinuclease ABC subunit A 1560 72.82 0 1651098..1652234 - 378 77463525 - RSP_2967 - major facilitator transporter 1561 67.24 0 1652437..1653843 - 468 77463526 - RSP_2968 - dihydrolipoamide dehydrogenase 1562 69.79 0 1653920..1654495 - 191 77463527 - RSP_2969 - hypothetical protein 1563 66.98 0 1654702..1655958 - 418 77463528 - RSP_2970 - major facilitator transporter 1564 71.66 0 1656038..1657078 - 346 77463529 - RSP_2971 - S-adenosylmethionine tRNA ribosyltransferase-isomerase 1565 73.03 +1 1657164..1660448 - 1094 77463530 - RSP_2972 - hypothetical protein 1566 65.80 0 1660539..1661000 + 153 77463531 - RSP_2973 - peroxiredoxin 1567 67.34 0 1661411..1662754 + 447 77463532 - RSP_2974 - putative metalopeptidase 1568 67.24 0 1662744..1663262 + 172 77463533 - RSP_2975 - hypothetical protein 1569 62.16 -1 1663458..1664234 - 258 77463534 - RSP_2976 - hypothetical protein 1570 66.67 0 1664604..1665731 - 375 77463535 prfB RSP_2977 - peptide chain release factor 2 1571 67.45 0 1665840..1668389 - 849 77463536 mrcA RSP_2978 - penicillin-binding protein 1A (PBP-1a) 1572 73.71 +1 1668481..1669716 - 411 77463537 amiC RSP_2979 - N-acetylmuramoyl-L-alanine amidase 1573 69.97 0 1669765..1670916 - 383 77463538 aspAT RSP_2980 - aminotransferase 1574 68.01 0 1671084..1671827 + 247 77463539 - RSP_2981 - putative protein-disulfide isomerase 1575 67.20 0 1672163..1673296 - 377 77463540 ispG RSP_2982 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1576 70.74 0 1673427..1674554 - 375 77463541 - RSP_2983 - hypothetical protein 1577 65.36 0 1674752..1675975 - 407 77463542 hemA RSP_2984 - 5-aminolevulinate synthase 1578 72.63 0 1676110..1676679 - 189 77463543 - RSP_2985 - hypothetical protein 1579 69.36 0 1676870..1678282 + 470 77463544 - RSP_2986 - hypothetical protein 1580 70.72 0 1678279..1678722 + 147 77463545 - RSP_2987 - acetyltransferase 1581 72.81 0 1679197..1679961 - 254 77463546 - RSP_2988 - Pirin-related protein 1582 41.52 -2 1680129..1680470 + 113 77463547 - RSP_2989 - hypothetical protein 1583 50.35 -2 1680503..1683964 - 1153 77463548 - RSP_2990 - hypothetical protein 1584 49.55 -2 1684120..1684452 - 110 77463549 - RSP_2991 - hypothetical protein 1585 48.53 -2 1684595..1685206 - 203 77463550 - RSP_2992 - hypothetical protein 1586 45.58 -2 1685278..1685922 - 214 77463551 - RSP_2993 - hypothetical protein 1587 53.53 -2 1685926..1688079 - 717 77463552 - RSP_2994 - hypothetical protein 1588 46.71 -2 1689113..1689598 - 161 77463553 - RSP_6243 - putative endonuclease 1589 46.51 -2 1690255..1690626 - 123 77463554 - RSP_6244 - hypothetical protein 1590 49.17 -2 1690672..1691094 - 140 77463555 - RSP_6245 - hypothetical protein 1591 45.60 -2 1691095..1691412 - 105 77463556 - RSP_6246 - bacteriophage head-tail adaptor 1592 43.57 -2 1691414..1691755 - 113 77463557 - RSP_6247 - Phage-related protein, DNA packing 1593 53.60 -2 1691779..1692888 - 369 77463558 - RSP_2995 - phage major capsid protein, gp36 1594 45.52 -2 1692961..1693485 - 174 77463559 - RSP_2996 - prohead peptidase 1595 49.96 -2 1693482..1694708 - 408 77463560 - RSP_2997 - putative head portal protein 1596 49.34 -2 1694748..1696334 - 528 77463561 - RSP_2998 - putative terminase large subunit 1597 46.26 -2 1696321..1696761 - 146 77463562 - RSP_2999 - hypothetical protein 1598 43.91 -2 1697025..1697336 - 103 77463563 - RSP_3000 - hypothetical protein 1599 45.17 -2 1697390..1697896 - 168 77463564 - RSP_3001 - endonuclease 1600 46.98 -2 1697978..1698358 - 126 77463565 - RSP_6248 - putative class I holin 1601 51.40 -2 1698327..1698719 - 130 77463566 - RSP_6249 - hypothetical protein 1602 46.30 -2 1699690..1700622 - 310 77463567 - RSP_6250 - hypothetical protein 1603 56.06 -2 1704125..1704520 - 131 77463568 spbB RSP_0002 - histone-like nucleoid-structuring protein H-NS 1604 51.24 -2 1704748..1706277 - 509 77463569 - RSP_0003 - putative site-specific recombinase 1605 61.86 -1 1706240..1706530 - 96 77463570 - RSP_0004 - hypothetical protein 1606 67.05 0 1706705..1708261 + 518 77463571 guaA RSP_0005 - bifunctional GMP synthase/glutamine amidotransferase protein 1607 68.24 0 1708728..1709615 + 295 77463572 - RSP_0006 - DMT family permease 1608 66.22 0 1709694..1710818 + 374 77463573 - RSP_0007 - putative outer membrane protein 1609 71.95 0 1710871..1711836 + 321 77463574 - RSP_0008 - drug/metabolite exporter (DME) family protein 1610 67.01 0 1711869..1712738 + 289 77463575 - RSP_0009 - hypothetical protein 1611 63.73 -1 1712767..1713684 + 305 77463576 - RSP_0010 - homoserine O-succinyltransferase 1612 70.65 0 1713674..1714627 + 317 77463577 - RSP_0011 - hydrolase or acyltransferase (alpha/beta hydrolase) 1613 67.23 0 1714668..1715552 + 294 77463578 - RSP_0013 - hypothetical protein 1614 70.39 0 1715549..1716166 + 205 77463579 - RSP_0014 - TetR family transcriptional regulator 1615 68.40 0 1716318..1717415 - 365 77463580 - RSP_0015 - ABC spermidine/putrescine transporter, ATPase subunit 1616 65.43 0 1717412..1718218 - 268 77463581 - RSP_0016 - ABC spermidine/putrescine transporter, inner membrane subunit 1617 63.06 -1 1718215..1719102 - 295 77463582 - RSP_0017 - ABC spermidine/putrescine transporter, inner membrane subunit 1618 72.29 0 1719530..1720933 - 467 77463583 - RSP_0018 - GntR family transcriptional regulator 1619 71.49 0 1721018..1721245 + 75 77463584 - RSP_0019 - hypothetical protein 1620 69.35 0 1721336..1722043 - 235 77463585 - RSP_0020 - hypothetical protein 1621 66.87 0 1722384..1722866 - 160 77463586 rpsI RSP_0021 - 30S ribosomal protein S9 1622 63.01 -1 1722870..1723334 - 154 77463587 rplM RSP_0022 - 50S ribosomal protein L13 1623 74.12 +1 1723539..1724330 - 263 77463588 - RSP_6083 - hypothetical protein 1624 64.98 0 1724906..1725439 + 177 77463589 rfbC RSP_0024 - dTDP-4-dehydrorhamnose 3,5-epimerase 1625 68.89 0 1725765..1727114 - 449 77463590 - RSP_0025 - NAD(P)-dependent oxidoreductase 1626 66.10 0 1727111..1728166 - 351 77463591 - RSP_0026 - epimerase/dehydratase 1627 76.14 +1 1728364..1729155 - 263 77463592 - RSP_0027 - hypothetical protein 1628 74.47 +1 1729383..1730381 + 332 77463593 - RSP_0028 - short chain dehydrogenase 1629 67.13 0 1730543..1732042 + 499 77463594 - RSP_0029 - acetyl-CoA hydrolase/transferase family protein 1630 69.18 0 1732315..1734816 - 833 77463595 - RSP_0030 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1631 67.82 0 1734863..1735036 - 57 77463596 - RSP_6084 - hypothetical protein 1632 74.36 +1 1735288..1736106 + 272 77463597 - RSP_6085 - hypothetical protein 1633 68.06 0 1736242..1736961 - 239 77463598 fliA RSP_0032 - sigma factor FliA (sigma-28 group, flagellar) 1634 77.02 +1 1736958..1737971 - 337 77463599 - RSP_0033 - hypothetical protein 1635 70.50 0 1737975..1740089 - 704 77463600 flhA RSP_0034 - flagellar biosynthesis protein, FlhA 1636 71.14 0 1740409..1740810 + 133 77463601 - RSP_0035 - hypothetical protein 1637 76.98 +1 1740807..1741892 + 361 77463602 - RSP_6086 - hypothetical protein 1638 77.28 +2 1741889..1742557 + 222 77463603 flgA RSP_0036 - flagellar basal-body P-ring formation protein FlgA 1639 65.08 0 1742579..1742893 + 104 77463604 flgM RSP_0037 - putative FlgM, negative regulator of flagellin synthesis 1640 72.58 0 1742922..1743293 + 123 77463605 - RSP_6087 - hypothetical protein 1641 76.78 +1 1743312..1743944 - 210 77463606 - RSP_6088 - Sel1 repeat-containing protein 1642 69.54 0 1743941..1744393 - 150 77463607 - RSP_6089 - hypothetical protein 1643 73.46 +1 1744503..1744988 + 161 77463608 - RSP_6090 - hypothetical protein 1644 76.19 +1 1745042..1745230 + 62 77463609 - RSP_0038 - hypothetical protein 1645 78.93 +2 1745558..1745875 - 105 77463610 - RSP_0039 - hypothetical protein 1646 67.19 0 1745872..1746252 - 126 77463611 fliS RSP_0040 - putative flagellar protein FliS 1647 76.98 +1 1746536..1747117 - 193 77463612 - RSP_0041 - hypothetical protein 1648 73.42 +1 1747255..1750542 - 1095 77463613 cheA3 RSP_0042 - chemotaxis histidine protein kinase, CheA3 1649 66.17 0 1750569..1750973 - 134 77463614 cheY6 RSP_0043 - chemotaxis response regulator, CheY6 1650 73.36 +1 1751177..1752880 - 567 77463615 tlpT RSP_0044 - putative cytoplasmic chemoreceptor, TlpT 1651 74.06 +1 1752877..1753593 - 238 77463616 slp RSP_0045 - Slp 1652 70.20 0 1753606..1754115 - 169 77463617 cheW4 RSP_0046 - CheW protein 1653 74.59 +1 1754134..1755231 - 365 77463618 cheB2 RSP_0047 - chemotaxis methylesterase, CheB2 1654 70.00 0 1755231..1756040 - 269 77463619 cheR3 RSP_0048 - MCP methyltransferase, CheR-type 1655 71.42 0 1756037..1757236 - 399 77463620 cheA4 RSP_0049 - chemotaxis histidine protein kinase, CheA4 1656 57.52 -2 1757381..1757686 - 101 77463621 - RSP_6091 - hypothetical protein 1657 72.56 0 1758112..1759248 + 378 77463622 torF RSP_0051 - Torf protein 1658 70.68 0 1759262..1759585 + 107 77463623 fliE RSP_0052 - flagellar protein FliE 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0