version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1336 71.52 0 1399432..1400751 + 439 77463301 - RSP_2749 - P4 family integrase 1337 64.05 -1 1401018..1401476 + 152 77463302 - RSP_2750 - hypothetical protein 1338 65.22 0 1401473..1402648 + 391 77463303 - RSP_2751 - hypothetical protein 1339 68.27 0 1402642..1403139 + 165 77463304 - RSP_2753 - hypothetical protein 1340 66.95 0 1403136..1403489 + 117 77463305 - RSP_6068 - hypothetical protein 1341 76.26 +1 1403476..1404069 + 197 77463306 - RSP_2754 - hypothetical protein 1342 71.60 0 1404223..1404648 + 141 77463307 - RSP_2755 - hypothetical protein 1343 71.11 0 1404645..1405229 + 194 77463308 - RSP_2756 - hypothetical protein 1344 71.65 0 1405775..1406557 + 260 77463309 - RSP_6069 - hypothetical protein 1345 68.65 0 1406572..1407225 + 217 77463310 - RSP_2757 - hypothetical protein 1346 71.54 0 1407231..1407743 + 170 77463311 - RSP_2758 - hypothetical protein 1347 73.13 +1 1407736..1408137 + 133 77463312 - RSP_2759 - hypothetical protein 1348 70.42 0 1408130..1408582 + 150 77463313 - RSP_2760 - hypothetical protein 1349 67.09 0 1408579..1408812 + 77 77463314 - RSP_2761 - putative P2-like prophage tail protein X 1350 67.23 0 1409510..1409863 - 117 77463315 - RSP_2762 - hypothetical protein 1351 60.24 -2 1410065..1410313 + 82 77463316 - RSP_2763 - hypothetical protein 1352 66.99 0 1410310..1410615 + 101 77463317 - RSP_2764 - hypothetical protein 1353 71.79 0 1411144..1411416 + 90 77463318 - RSP_2765 - hypothetical protein 1354 70.07 0 1412708..1413001 + 97 77463319 - RSP_6070 - hypothetical protein 1355 69.95 0 1413396..1413761 - 121 77463320 - RSP_6242 - hypothetical protein 1356 70.33 0 1413841..1415862 - 673 77463321 - RSP_2766 - hypothetical protein 1357 68.72 0 1415997..1416971 - 324 77463322 - RSP_2768 - methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase 1358 67.59 0 1416968..1417939 - 323 77463323 - RSP_2769 - 5,10-methylenetetrahydrofolate reductase 1359 69.73 0 1417926..1418219 - 97 77463324 - RSP_2770 - hypothetical protein 1360 68.51 0 1418489..1419625 + 378 77463325 - RSP_2771 - putative exopolyphosphatase 1361 68.03 0 1419622..1420356 + 244 77463326 ftsJ RSP_2772 - 23S rRNA methylase 1362 64.63 -1 1420507..1421145 - 212 77463327 - RSP_2773 - hypothetical protein 1363 69.53 0 1421362..1423002 + 546 77463328 - RSP_2774 - hypothetical protein 1364 70.79 0 1423051..1424142 + 363 77463329 lpxD RSP_2775 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1365 62.92 -1 1424176..1424442 + 88 77463330 acpP RSP_2776 - Acyl carrier protein, AcpP 1366 68.07 0 1424454..1425662 + 402 77463331 - RSP_2777 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1367 68.91 0 1425730..1426398 - 222 77463332 - RSP_2778 - hypothetical protein 1368 66.94 0 1426933..1428399 - 488 77463333 catA RSP_2779 - catalase 1369 73.57 +1 1428501..1429427 + 308 77463334 oxyR RSP_2780 - LysR family transcriptional regulator 1370 67.40 0 1429456..1430004 - 182 77463335 - RSP_2781 - peroxiredoxin/glutaredoxin family protein 1371 68.85 0 1430166..1430897 - 243 77463336 aqpZ RSP_2782 - aquaporin z, major Intrinsic protein (MIP) family 1372 67.81 0 1431034..1431996 + 320 77463337 lipA RSP_2783 - lipoyl synthase 1373 70.15 0 1432069..1432959 - 296 77463338 cycG RSP_2784 - diheme class I cytochrome c 1374 67.75 0 1432963..1433424 - 153 77463339 CycF RSP_2785 - cytochrome c-554 1375 64.10 -1 1433831..1434376 - 181 77463340 HPRT RSP_2786 - hypoxanthine phosphoribosyltransferase 1376 64.24 -1 1434468..1434920 + 150 77463341 - RSP_2787 - hypothetical protein 1377 68.40 0 1434945..1435232 + 95 77463342 - RSP_2788 - hypothetical protein 1378 68.12 0 1435363..1436742 - 459 77463343 - RSP_2865 - putative transposase 1379 67.37 0 1436969..1437679 + 236 77463344 cbbE RSP_2864 - ribulose-5-phosphate 3-epimerase 1380 68.95 0 1437761..1438945 - 394 77463345 - RSP_2862 - glycine/D-amino acid oxidase (deaminating) 1381 66.33 0 1439332..1440228 - 298 77463346 tsf RSP_2861 - elongation factor Ts 1382 66.27 0 1440310..1441071 - 253 77463347 rpsB RSP_2860 - 30S ribosomal protein S2 1383 75.96 +1 1441320..1442234 + 304 77463348 - RSP_6216 - carbohydrate kinase PfkB family 1384 71.60 0 1442231..1443142 + 303 77463349 - RSP_2858 - IndA involved in pigment biosynthesis 1385 68.05 0 1443169..1443966 - 265 77463350 - RSP_2857 - D-beta-hydroxybutyrate dehydrogenase 1386 67.99 0 1444233..1446044 + 603 77463351 - RSP_2856 - putative oligopeptide ABC transporter, periplasmic-binding protein 1387 69.05 0 1446268..1449534 - 1088 77463352 - RSP_2855 - cation efflux transporter 1388 73.39 +1 1449545..1450705 - 386 77463353 - RSP_2854 - cation efflux transporter 1389 69.47 0 1450705..1451346 - 213 77463354 - RSP_2853 - TetR family transcriptional regulator 1390 70.39 0 1451545..1452189 + 214 77463355 - RSP_2852 - polyketide biosynthesis associated protein 1391 70.28 0 1452186..1453403 + 405 77463356 - RSP_2851 - major facilitator superfamily multidrug-efflux transporter 1392 68.35 0 1453666..1457163 - 1165 77463357 mfd RSP_2850 - transcription-repair coupling factor (helicase) 1393 66.86 0 1457240..1457755 - 171 77463358 - RSP_2849 - hypothetical protein 1394 67.76 0 1457899..1458903 + 334 77463359 hemB RSP_2848 - delta-aminolevulinic acid dehydratase 1395 68.42 0 1459018..1459587 + 189 77463360 - RSP_2847 - hypothetical protein 1396 70.03 0 1459785..1460675 - 296 77463361 - RSP_2846 - putative 3-hydroxyisobutyrate dehydrogenase 1397 69.01 0 1460728..1463199 + 823 77463362 - RSP_2845 - putative penicillin acylase (penicillin amidase) 1398 69.86 0 1463661..1464911 - 416 77463363 - RSP_2844 - putative GTP-binding protein 1399 53.42 -2 1465006..1465239 - 77 77463364 hfq RSP_2843 - RNA-binding protein Hfq 1400 69.84 0 1465397..1466908 - 503 77463365 trkH1 RSP_2842 - potassium uptake transporter, transmembrane subunit, TrkH 1401 67.68 0 1466910..1468286 - 458 77463366 trkA RSP_2841 - potassium transporter peripheral membrane component 1402 68.13 0 1468341..1469771 - 476 77463367 ntrX RSP_2840 - nitrogen assimilation transcriptional regulator, NtrX 1403 68.92 0 1469768..1472077 - 769 77463368 ntrY RSP_2839 - nitrogen regulation protein, NtrY, Signal transduction histidine kinase 1404 68.64 0 1472129..1473496 - 455 77463369 ntrC RSP_2838 - nitrogen metabolism transcriptional regulator, NtrC 1405 67.21 0 1473496..1474602 - 368 77463370 ntrB RSP_2837 - nitrogen regulation protein, NtrB signal transduction histidine kinase 1406 74.01 +1 1474599..1475579 - 326 77463371 nifR3 RSP_2836 - tRNA-dihydrouridine synthase, nifR3 1407 75.07 +1 1475793..1476470 + 225 77463372 ispD RSP_2835 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1408 69.38 0 1476579..1477058 + 159 77463373 ispF RSP_6071 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1409 71.49 0 1477055..1477552 + 165 77463374 pgpA RSP_2834 - putative phosphatidylglycerophosphatase A 1410 74.07 +1 1477549..1478034 + 161 77463375 cinA RSP_2833 - putative competence-damaged inducible protein 1411 72.86 0 1478069..1479247 - 392 77463376 - RSP_2832 - flavoprotein 1412 66.17 0 1479750..1480358 - 202 77463377 cobO RSP_2831 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1413 73.66 +1 1480355..1481584 - 409 77463378 - RSP_2830 - hypothetical protein 1414 73.61 +1 1481992..1482351 + 119 77463379 - RSP_2829 - hypothetical protein 1415 71.87 0 1482348..1483385 + 345 77463380 cobW RSP_2828 - cobalamin synthesis protein CobW 1416 73.37 +1 1483389..1486625 + 1078 77463381 cobN RSP_2827 - cobaltochelatase 1417 71.75 0 1486625..1487254 + 209 77463382 cobH RSP_6217 - precorrin-8X methylmutase 1418 70.36 0 1487254..1487985 + 243 77463383 cobI RSP_2826 - precorrin-2 C20-methyltransferase 1419 71.56 0 1487982..1488716 + 244 77463384 cobJ RSP_2824 - precorrin-3 methyltransferase 1420 75.13 +1 1488692..1489435 - 247 77463385 cobK RSP_2825 - cobalt-precorrin-6x reductase 1421 76.46 +1 1489434..1490597 + 387 77463386 cobL RSP_2823 - putative precorrin-6y C5,15-methyltransferase 1422 77.07 +1 1490594..1490968 + 124 77463387 cobE RSP_2822 - putative precorrin methylase 1423 72.67 0 1490965..1491747 + 260 77463388 cobM RSP_2821 - precorrin-4 C11-methyltransferase 1424 73.14 +1 1491744..1492469 + 241 77463389 cobA RSP_2820 - uroporphyrin-III C-methyltransferase 1425 71.63 0 1492560..1493324 + 254 77463390 cobF RSP_2819 - precorrin 6A synthase 1426 72.24 0 1493773..1494885 - 370 77463391 aroB RSP_2818 - 3-dehydroquinate synthase 1427 70.51 0 1494882..1495427 - 181 77463392 aroK RSP_2817 - shikimate kinase 1428 73.49 +1 1495740..1497308 + 522 77463393 - RSP_2816 - hypothetical protein 1429 70.51 0 1497308..1498243 + 311 77463394 xerD RSP_2815 - integrase/recombinase XerD 1430 66.67 0 1498312..1499640 + 442 77463395 corB RSP_2814 - hypothetical protein 1431 73.88 +1 1499610..1500746 - 378 77463396 - RSP_6073 - hypothetical protein 1432 72.22 0 1500964..1501341 + 125 77463397 - RSP_6226 - hypothetical protein 1433 67.64 0 1501478..1503019 - 513 77463398 mttB RSP_2813 - putative trimethylamine methyltransferase protein 1434 74.26 +1 1503135..1503740 - 201 77463399 - RSP_2812 - hypothetical protein 1435 69.77 0 1503743..1504708 - 321 77463400 - RSP_2811 - ABC transporter periplasmic substrate-binding protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0