version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1307 74.55 +1 1370494..1371102 + 202 77463272 - RSP_2720 - LysE/RhtB family amino acid efflux pump 1308 70.50 0 1371099..1371437 - 112 77463273 - RSP_2721 - hypothetical protein 1309 67.00 0 1371654..1373153 + 499 77463274 cysS RSP_2722 - cysteinyl-tRNA synthetase 1310 70.78 0 1373279..1374931 + 550 77463275 - RSP_2723 - alpha-isopropylmalate/homocitrate synthase family transferase 1311 73.61 +1 1374928..1375647 + 239 77463276 - RSP_2724 - methylase involved in ubiquinone/menaquinone biosynthesis 1312 77.99 +2 1375644..1376411 + 255 77463277 - RSP_2725 - phytoene/squalene synthetase 1313 70.76 0 1376415..1377635 - 406 77463278 - RSP_2726 - major facilitator superfamily multidrug transporter 1314 73.65 +1 1377774..1378403 + 209 77463279 - RSP_2727 - 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 1315 73.60 +1 1378400..1379062 + 220 77463280 - RSP_2728 - phospholipase/carboxylesterase 1316 65.13 0 1379593..1380177 + 194 77463281 - RSP_2729 - restriction endonuclease 1317 70.64 0 1380472..1380798 + 108 77463282 - RSP_2730 - ArsR family transcriptional regulator 1318 70.17 0 1381081..1381794 + 237 77463283 ArsH RSP_2731 - arsenical resistance protein, ArsH 1319 74.83 +1 1381791..1382954 + 387 77463284 - RSP_2732 - major facilitator transporter 1320 67.08 0 1383171..1384622 + 483 77463285 zwf RSP_2734 - glucose-6-phosphate 1-dehydrogenase 1321 71.28 0 1384661..1385332 + 223 77463286 pgl RSP_2735 - 6-phosphogluconolactonase 1322 69.10 0 1385352..1386953 + 533 77463287 pgi RSP_2736 - glucose-6-phosphate isomerase 1323 69.54 0 1387180..1387527 - 115 77463288 - RSP_2737 - putative ssRNA endoribonuclease L-PSP 1324 69.83 0 1387846..1388793 + 315 77463289 - RSP_2738 - rhodanese-related sulfurtransferase 1325 73.85 +1 1388804..1389931 + 375 77463290 - RSP_2739 - hypothetical protein 1326 75.00 +1 1389928..1390095 + 55 77463291 - RSP_6066 - hypothetical protein 1327 65.55 0 1390370..1391626 + 418 77463292 - RSP_2740 - putative glucose/sorbosone dehydrogenase 1328 71.02 0 1391623..1392219 + 198 77463293 - RSP_2741 - class I diheme cytochrome c4 1329 68.18 0 1392245..1392574 - 109 77463294 - RSP_6067 - hypothetical protein 1330 67.90 0 1392722..1393936 + 404 77463295 - RSP_2742 - hypothetical protein 1331 70.83 0 1393970..1394737 - 255 77463296 - RSP_2744 - hypothetical protein 1332 68.63 0 1394903..1395871 + 322 77463297 - RSP_2745 - hypothetical protein 1333 72.38 0 1395862..1396806 - 314 77463298 - RSP_2746 - hypothetical protein 1334 71.03 0 1396918..1398246 - 442 77463299 - RSP_2747 - glycosyltransferase 1335 66.16 0 1398481..1398876 - 131 77463300 - RSP_2748 - CopG family transcriptional regulator 1336 71.52 0 1399432..1400751 + 439 77463301 - RSP_2749 - P4 family integrase 1337 64.05 -1 1401018..1401476 + 152 77463302 - RSP_2750 - hypothetical protein 1338 65.22 0 1401473..1402648 + 391 77463303 - RSP_2751 - hypothetical protein 1339 68.27 0 1402642..1403139 + 165 77463304 - RSP_2753 - hypothetical protein 1340 66.95 0 1403136..1403489 + 117 77463305 - RSP_6068 - hypothetical protein 1341 76.26 +1 1403476..1404069 + 197 77463306 - RSP_2754 - hypothetical protein 1342 71.60 0 1404223..1404648 + 141 77463307 - RSP_2755 - hypothetical protein 1343 71.11 0 1404645..1405229 + 194 77463308 - RSP_2756 - hypothetical protein 1344 71.65 0 1405775..1406557 + 260 77463309 - RSP_6069 - hypothetical protein 1345 68.65 0 1406572..1407225 + 217 77463310 - RSP_2757 - hypothetical protein 1346 71.54 0 1407231..1407743 + 170 77463311 - RSP_2758 - hypothetical protein 1347 73.13 +1 1407736..1408137 + 133 77463312 - RSP_2759 - hypothetical protein 1348 70.42 0 1408130..1408582 + 150 77463313 - RSP_2760 - hypothetical protein 1349 67.09 0 1408579..1408812 + 77 77463314 - RSP_2761 - putative P2-like prophage tail protein X 1350 67.23 0 1409510..1409863 - 117 77463315 - RSP_2762 - hypothetical protein 1351 60.24 -2 1410065..1410313 + 82 77463316 - RSP_2763 - hypothetical protein 1352 66.99 0 1410310..1410615 + 101 77463317 - RSP_2764 - hypothetical protein 1353 71.79 0 1411144..1411416 + 90 77463318 - RSP_2765 - hypothetical protein 1354 70.07 0 1412708..1413001 + 97 77463319 - RSP_6070 - hypothetical protein 1355 69.95 0 1413396..1413761 - 121 77463320 - RSP_6242 - hypothetical protein 1356 70.33 0 1413841..1415862 - 673 77463321 - RSP_2766 - hypothetical protein 1357 68.72 0 1415997..1416971 - 324 77463322 - RSP_2768 - methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase 1358 67.59 0 1416968..1417939 - 323 77463323 - RSP_2769 - 5,10-methylenetetrahydrofolate reductase 1359 69.73 0 1417926..1418219 - 97 77463324 - RSP_2770 - hypothetical protein 1360 68.51 0 1418489..1419625 + 378 77463325 - RSP_2771 - putative exopolyphosphatase 1361 68.03 0 1419622..1420356 + 244 77463326 ftsJ RSP_2772 - 23S rRNA methylase 1362 64.63 -1 1420507..1421145 - 212 77463327 - RSP_2773 - hypothetical protein 1363 69.53 0 1421362..1423002 + 546 77463328 - RSP_2774 - hypothetical protein 1364 70.79 0 1423051..1424142 + 363 77463329 lpxD RSP_2775 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1365 62.92 -1 1424176..1424442 + 88 77463330 acpP RSP_2776 - Acyl carrier protein, AcpP 1366 68.07 0 1424454..1425662 + 402 77463331 - RSP_2777 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1367 68.91 0 1425730..1426398 - 222 77463332 - RSP_2778 - hypothetical protein 1368 66.94 0 1426933..1428399 - 488 77463333 catA RSP_2779 - catalase 1369 73.57 +1 1428501..1429427 + 308 77463334 oxyR RSP_2780 - LysR family transcriptional regulator 1370 67.40 0 1429456..1430004 - 182 77463335 - RSP_2781 - peroxiredoxin/glutaredoxin family protein 1371 68.85 0 1430166..1430897 - 243 77463336 aqpZ RSP_2782 - aquaporin z, major Intrinsic protein (MIP) family 1372 67.81 0 1431034..1431996 + 320 77463337 lipA RSP_2783 - lipoyl synthase 1373 70.15 0 1432069..1432959 - 296 77463338 cycG RSP_2784 - diheme class I cytochrome c 1374 67.75 0 1432963..1433424 - 153 77463339 CycF RSP_2785 - cytochrome c-554 1375 64.10 -1 1433831..1434376 - 181 77463340 HPRT RSP_2786 - hypoxanthine phosphoribosyltransferase 1376 64.24 -1 1434468..1434920 + 150 77463341 - RSP_2787 - hypothetical protein 1377 68.40 0 1434945..1435232 + 95 77463342 - RSP_2788 - hypothetical protein 1378 68.12 0 1435363..1436742 - 459 77463343 - RSP_2865 - putative transposase 1379 67.37 0 1436969..1437679 + 236 77463344 cbbE RSP_2864 - ribulose-5-phosphate 3-epimerase 1380 68.95 0 1437761..1438945 - 394 77463345 - RSP_2862 - glycine/D-amino acid oxidase (deaminating) 1381 66.33 0 1439332..1440228 - 298 77463346 tsf RSP_2861 - elongation factor Ts 1382 66.27 0 1440310..1441071 - 253 77463347 rpsB RSP_2860 - 30S ribosomal protein S2 1383 75.96 +1 1441320..1442234 + 304 77463348 - RSP_6216 - carbohydrate kinase PfkB family 1384 71.60 0 1442231..1443142 + 303 77463349 - RSP_2858 - IndA involved in pigment biosynthesis 1385 68.05 0 1443169..1443966 - 265 77463350 - RSP_2857 - D-beta-hydroxybutyrate dehydrogenase 1386 67.99 0 1444233..1446044 + 603 77463351 - RSP_2856 - putative oligopeptide ABC transporter, periplasmic-binding protein 1387 69.05 0 1446268..1449534 - 1088 77463352 - RSP_2855 - cation efflux transporter 1388 73.39 +1 1449545..1450705 - 386 77463353 - RSP_2854 - cation efflux transporter 1389 69.47 0 1450705..1451346 - 213 77463354 - RSP_2853 - TetR family transcriptional regulator 1390 70.39 0 1451545..1452189 + 214 77463355 - RSP_2852 - polyketide biosynthesis associated protein 1391 70.28 0 1452186..1453403 + 405 77463356 - RSP_2851 - major facilitator superfamily multidrug-efflux transporter 1392 68.35 0 1453666..1457163 - 1165 77463357 mfd RSP_2850 - transcription-repair coupling factor (helicase) 1393 66.86 0 1457240..1457755 - 171 77463358 - RSP_2849 - hypothetical protein 1394 67.76 0 1457899..1458903 + 334 77463359 hemB RSP_2848 - delta-aminolevulinic acid dehydratase 1395 68.42 0 1459018..1459587 + 189 77463360 - RSP_2847 - hypothetical protein 1396 70.03 0 1459785..1460675 - 296 77463361 - RSP_2846 - putative 3-hydroxyisobutyrate dehydrogenase 1397 69.01 0 1460728..1463199 + 823 77463362 - RSP_2845 - putative penicillin acylase (penicillin amidase) 1398 69.86 0 1463661..1464911 - 416 77463363 - RSP_2844 - putative GTP-binding protein 1399 53.42 -2 1465006..1465239 - 77 77463364 hfq RSP_2843 - RNA-binding protein Hfq 1400 69.84 0 1465397..1466908 - 503 77463365 trkH1 RSP_2842 - potassium uptake transporter, transmembrane subunit, TrkH 1401 67.68 0 1466910..1468286 - 458 77463366 trkA RSP_2841 - potassium transporter peripheral membrane component 1402 68.13 0 1468341..1469771 - 476 77463367 ntrX RSP_2840 - nitrogen assimilation transcriptional regulator, NtrX 1403 68.92 0 1469768..1472077 - 769 77463368 ntrY RSP_2839 - nitrogen regulation protein, NtrY, Signal transduction histidine kinase 1404 68.64 0 1472129..1473496 - 455 77463369 ntrC RSP_2838 - nitrogen metabolism transcriptional regulator, NtrC 1405 67.21 0 1473496..1474602 - 368 77463370 ntrB RSP_2837 - nitrogen regulation protein, NtrB signal transduction histidine kinase 1406 74.01 +1 1474599..1475579 - 326 77463371 nifR3 RSP_2836 - tRNA-dihydrouridine synthase, nifR3 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.