version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1198 69.55 0 1250170..1251246 - 358 77463163 dcd RSP_2609 - 2'-deoxycytidine 5'-triphosphate deaminase 1199 74.00 +1 1251470..1252315 - 281 77463164 - RSP_2610 - MerR family transcriptional regulator 1200 65.35 0 1252322..1252624 - 100 77463165 ihfA RSP_2611 - histone-like DNA-binding protein (IHF) 1201 68.83 0 1252715..1253686 - 323 77463166 fabH RSP_2612 - 3-oxoacyl-[acyl-carrier-protein] synthase III 1202 68.28 0 1253693..1254805 - 370 77463167 plsX RSP_2613 - putative glycerol-3-phosphate acyltransferase PlsX 1203 67.15 0 1254831..1255037 - 68 77463168 rpmF RSP_2614 - 50S ribosomal protein L32 1204 74.58 +1 1255215..1255808 - 197 77463169 - RSP_2615 - hypothetical protein 1205 67.27 0 1256030..1256527 + 165 77463170 - RSP_2616 - hypothetical protein 1206 67.41 0 1256620..1257024 - 134 77463171 - RSP_2617 - peptide methionine sulfoxide reductase 1207 71.18 0 1257131..1257883 + 250 77463172 - RSP_2618 - ornithine-acyl[acyl carrier protein] N-acyltransferase 1208 69.91 0 1257890..1259029 - 379 77463173 trmU RSP_2619 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1209 65.95 0 1259153..1259431 + 92 77463174 - RSP_2620 - hypothetical protein 1210 60.64 -1 1259527..1260240 + 237 77463175 ctrA RSP_2621 - two component transcriptional regulator 1211 70.35 0 1260334..1262448 + 704 77463176 ligA RSP_2622 - DNA ligase 1212 72.22 0 1262445..1264532 + 695 77463177 recG RSP_2623N - heme peroxidase 1213 60.16 -2 1264784..1264906 + 40 77463178 - RSP_2624 - hypothetical protein 1214 71.43 0 1265057..1265497 - 146 77463179 nifU RSP_2625 - NifU-related protein involved in Fe-S cluster formation 1215 67.50 0 1265563..1265922 + 119 77463180 hisI RSP_2627 - phosphoribosyl-AMP cyclohydrolase 1216 73.26 +1 1266116..1266949 - 277 77463181 gltX/glnS RSP_2628 - glutamyl-/ glutaminyl-tRNA synthetase 1217 67.49 0 1266934..1268268 - 444 77463182 gid RSP_2629 - tRNA (uracil-5-)-methyltransferase Gid 1218 67.22 0 1268272..1270995 - 907 77463183 gyrA RSP_2630 - DNA gyrase subunit A 1219 60.98 -1 1271238..1271501 + 87 77463184 - RSP_2631 - USG protein 1220 70.77 0 1271615..1272541 - 308 77463185 argI RSP_2632 - arginase 1221 69.91 0 1273029..1274999 + 656 77463186 ccmF RSP_2633 - cytochrome c maturation protein, CcmF 1222 71.05 0 1274996..1275451 + 151 77463187 ccmH RSP_2634 - cytochrome c maturation protein, CcmH 1223 67.56 0 1276339..1276899 - 186 77463188 ilvH RSP_2636 - acetolactate synthase 3 regulatory subunit 1224 66.27 0 1276982..1278748 - 588 77463189 - RSP_2637 - acetolactate synthase 3 catalytic subunit 1225 66.67 0 1279043..1279960 - 305 77463190 - RSP_2638 - putative sodium/calcium exchanger 1226 67.14 0 1280450..1281292 - 280 77463191 - RSP_2639 - arginyl-tRNA-protein transferase 1227 67.99 0 1281399..1281851 - 150 77463192 - RSP_2640 - hypothetical protein 1228 68.37 0 1282161..1282571 - 136 77463193 - RSP_2641 - hypothetical protein 1229 72.82 0 1283010..1283480 - 156 77463194 - RSP_2642 - hypothetical protein 1230 72.14 0 1283622..1286471 + 949 77463195 glnE RSP_2643 - glutamate-ammonia-ligase adenylyltransferase 1231 74.81 +1 1286458..1286727 + 89 77463196 - RSP_2644 - hypothetical protein 1232 74.02 +1 1286934..1287572 - 212 77463197 eda RSP_2645 - 2-keto-3-deoxy-phosphogluconate aldolase 1233 72.71 0 1290283..1291473 + 396 77463198 - RSP_2647 - SAM-dependent methyltransferase 1234 73.30 +1 1291470..1292012 + 180 77463199 - RSP_2648 - hypothetical protein 1235 67.39 0 1292063..1292749 - 228 77463200 - RSP_2649 - putative Zn-dependent protease 1236 66.75 0 1292812..1293996 - 394 77463201 - RSP_2650 - hypothetical protein 1237 70.91 0 1294019..1294183 - 54 77463202 - RSP_6205 - hypothetical protein 1238 70.58 0 1294180..1295583 - 467 77463203 - RSP_2651 - hypothetical protein 1239 70.86 0 1295580..1296032 - 150 77463204 - RSP_2652 - putative acetyltransferase 1240 64.64 0 1296071..1296910 - 279 77463205 - RSP_2653 - AAA family ATPase 1241 63.52 -1 1297043..1297519 + 158 77463206 - RSP_2654 - DnaK suppressor protein 1242 71.60 0 1297615..1298790 + 391 77463207 nahG RSP_2656 - putative salicylate hydroxylase (salicylate 1-monooxygenase) 1243 71.68 0 1298787..1299185 - 132 77463208 - RSP_2655 - hypothetical protein 1244 68.59 0 1299328..1300107 - 259 77463209 xthA RSP_2657 - exodeoxyribonuclease III 1245 63.61 -1 1300184..1300510 - 108 77463210 - RSP_2658 - HesB/YadR/YfhF family protein 1246 67.55 0 1300585..1301721 + 378 77463211 dgt RSP_2659 - deoxyguanosinetriphosphate triphosphohydrolase 1247 67.29 0 1301738..1302859 + 373 77463212 - RSP_2660 - ribonuclease BN family protein 1248 76.55 +1 1302865..1304007 - 380 77463213 - RSP_2661 - Iron-containing alcohol dehydrogenase 1249 70.78 0 1304004..1305485 - 493 77463214 glpK RSP_2662 - glycerol kinase 1250 66.14 0 1305874..1307598 - 574 77463215 - RSP_2663 - ABC sugar (glycerol) transporter, periplasmic binding protein 1251 69.23 0 1307660..1307932 - 90 77463216 - RSP_2664 - hypothetical protein 1252 62.56 -1 1307934..1308737 - 267 77463217 - RSP_2665 - ABC sugar (glycerol) transporter, inner membrane subunit 1253 62.77 -1 1308775..1309647 - 290 77463218 - RSP_2666 - ABC sugar (glycerol) transporter, inner membrane subunit 1254 67.86 0 1309647..1310732 - 361 77463219 - RSP_2667 - ABC sugar (glycerol) transporter, ATPase subunit 1255 69.70 0 1310743..1311831 - 362 77463220 - RSP_2669 - ABC sugar (glycerol) transporter, ATPase subunit 1256 70.25 0 1311961..1313580 - 539 77463221 glpD RSP_2670 - glycerol-3-phosphate dehydrogenase 1257 66.30 0 1314041..1314316 - 91 77463222 - RSP_2671 - hypothetical protein 1258 74.44 +1 1314483..1314842 + 119 77463223 - RSP_2672 - hypothetical protein 1259 68.71 0 1314937..1317282 - 781 77463224 - RSP_2673 - quinoprotein glucose dehydrogenase 1260 62.64 -1 1317485..1317832 - 115 77463225 - RSP_2674 - hypothetical protein 1261 73.33 +1 1318469..1319263 - 264 77463226 - RSP_2675 - hypothetical protein 1262 71.05 0 1319386..1320297 - 303 77463227 - RSP_2676 - hypothetical protein 1263 66.67 0 1321303..1321683 - 126 77463228 - RSP_6064 - response regulator receiver domain-containing protein 1264 68.66 0 1321994..1322746 + 250 77463229 - RSP_2677 - Mg2+ transporter 1265 71.37 0 1322934..1323188 - 84 77463230 - RSP_2678 - hypothetical protein 1266 71.15 0 1323185..1325791 - 868 77463231 - RSP_2679 - ATP-dependent DNA ligase 1267 65.74 0 1326562..1326777 - 71 77463232 - RSP_6225 - hypothetical protein 1268 66.86 0 1326905..1327411 + 168 77463233 rpoE RSP_2681 - sigma factor, RpoE 1269 70.85 0 1327641..1328573 + 310 77463234 fabD RSP_2682 - [Acyl-carrier-protein] S-malonyltransferase 1270 72.29 0 1328804..1329034 - 76 77463235 - RSP_2683 - hypothetical protein 1271 70.81 0 1329031..1329513 - 160 77463236 - RSP_2684 - putative endonuclease involved in recombination 1272 73.52 +1 1329510..1330763 - 417 77463237 - RSP_2685 - putative cytochrome c-type biogenesis protein, cycH 1273 66.67 0 1330960..1332207 + 415 77463238 - RSP_2686 - putative sarcosine oxidase beta subunit 1274 63.47 -1 1332287..1332661 + 124 77463239 fbcQ RSP_2687 - cytochrome b-c1 subunit IV 1275 63.58 -1 1332701..1333024 + 107 77463240 soxD RSP_2688 - putative sarcosine oxidase delta subunit protein 1276 70.22 0 1333021..1336002 + 993 77463241 soxA RSP_2689 - putative sarcosine oxidase, alpha subunit 1277 70.79 0 1335995..1336552 + 185 77463242 - RSP_2690 - putative sarcosine oxidase gamma subunit 1278 68.16 0 1336565..1338508 - 647 77463243 - RSP_2692 - acyltransferase domain-containing protein 1279 62.00 -1 1338764..1339363 + 199 77463244 - RSP_2693 - Fe/Mn family superoxide dismutase 1280 67.75 0 1339516..1340070 - 184 77463245 - RSP_2694 - hypothetical protein 1281 73.54 +1 1340171..1341493 + 440 77463246 - RSP_2695 - peptidoglycan-binding protein 1282 67.92 0 1341579..1343417 + 612 77463247 - RSP_2696 - ABC transporter, fused ATPase and inner membrane subunits 1283 72.07 0 1343517..1344164 + 215 77463248 - RSP_2697 - hypothetical protein 1284 72.53 0 1344210..1345556 + 448 77463249 - RSP_2698 - putative quinoprotein 1285 67.96 0 1345615..1347078 + 487 77463250 engA RSP_2699 - GTP-binding protein EngA 1286 73.69 +1 1347320..1349299 - 659 77463251 - RSP_2700 - ABC oligo/dipeptide transporter, fused ATPase subunits 1287 71.43 0 1349292..1350446 - 384 77463252 - RSP_2701 - ABC oligo/dipeptide transporter, inner membrane subunit 1288 70.27 0 1350446..1351471 - 341 77463253 - RSP_2702 - ABC oligo/dipeptide transporter, inner membrane subunit 1289 65.80 0 1351475..1352980 - 501 77463254 - RSP_2703 - ABC dipeptide transporter, periplasmic binding protein 1290 71.75 0 1353302..1354246 - 314 77463255 miaA RSP_2704 - tRNA delta(2)-isopentenylpyrophosphate transferase 1291 65.32 0 1354336..1355076 + 246 77463256 pyrH RSP_2705 - uridylate kinase 1292 64.37 -1 1355162..1355728 + 188 77463257 frr RSP_2706 - ribosome recycling factor 1293 70.16 0 1355798..1356541 + 247 77463258 uppS RSP_2707 - undecaprenyl pyrophosphate synthetase 1294 68.61 0 1356538..1357359 + 273 77463259 cdsA RSP_2708 - phosphatidate cytidylyltransferase 1295 69.70 0 1357368..1358552 + 394 77463260 dxr RSP_2709 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1296 68.39 0 1358559..1359893 + 444 77463261 - RSP_2710 - putative membrane-associated zinc metalloprotease 1297 64.49 -1 1360060..1360197 + 45 77463262 - RSP_6065 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0