version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1117 63.02 -1 1167881..1168291 + 136 77463082 - RSP_2524 - carboxymuconolactone decarboxylase family protein 1118 65.85 0 1168288..1168902 + 204 77463083 nuoJ RSP_2525 - NADH dehydrogenase subunit J 1119 60.78 -1 1169062..1169367 + 101 77463084 nuoK RSP_2526 - NADH dehydrogenase subunit K 1120 65.83 0 1169373..1171535 + 720 77463085 nuoL RSP_2527 - NADH dehydrogenase subunit L 1121 64.20 -1 1171535..1173076 + 513 77463086 nuoM RSP_2529 - NADH dehydrogenase subunit M 1122 66.46 0 1173087..1174523 + 478 77463087 nuoN RSP_2530 - NADH dehydrogenase subunit N 1123 73.25 +1 1174540..1175268 + 242 77463088 birA RSP_2532 - putative biotin protein ligase 1124 64.47 -1 1175279..1176052 + 257 77463089 - RSP_2533 - pantothenate kinase 1125 68.10 0 1176049..1177722 + 557 77463090 - RSP_2534 - metallo-beta-lactamase superfamily hydrolase 1126 69.11 0 1178520..1180076 - 518 77463091 rhlE RSP_2536 - ATP-dependent helicase, DEAD-box 1127 66.42 0 1180302..1181906 - 534 77463092 prfC RSP_2537 - peptide chain release factor 3 1128 71.67 0 1182066..1182845 + 259 77463093 fabG RSP_2538 - Short-chain dehydrogenase/reductase 1129 70.36 0 1182882..1184018 + 378 77463094 - RSP_2539 - ABC transporter, ATPase subunit 1130 61.50 -1 1184186..1184398 + 70 77463095 tatA RSP_2540 - twin-arginine translocation system protein, TatA 1131 71.70 0 1184409..1184885 + 158 77463096 tatB RSP_6059 - twin-arginine translocation system protein, TatB 1132 63.10 -1 1184882..1185751 + 289 77463097 tatC RSP_2541 - twin-arginine translocation system protein, TatC 1133 68.45 0 1185748..1186587 + 279 77463098 - RSP_2542 - ATPase 1134 72.50 0 1186682..1187881 - 399 77463099 - RSP_2543 - peptidoglycan-binding LysM ( peptidase) 1135 68.33 0 1188005..1188664 - 219 77463100 - RSP_2544 - protein-L-isoaspartate O-methyltransferase 1136 71.25 0 1188661..1189446 - 261 77463101 surE RSP_2545 - 5'-nucleotidase / 3'-nucleotidase / exopolyphosphatase 1137 69.93 0 1190333..1190944 + 203 77463102 exoY RSP_2547 - exopolysaccharide production protein exoY 1138 69.99 0 1191016..1192248 + 410 77463103 exoF RSP_2548 - Outer membrane polysaccharide export protein, exoF 1139 69.46 0 1192424..1193713 - 429 77463104 exoQ RSP_2549 - putative polysaccharide polymerase 1140 65.01 0 1193730..1194512 - 260 77463105 exoK RSP_2550 - endo-beta-1,3-1,4-glycanase protein 1141 72.75 0 1194718..1196148 + 476 77463106 exoO RSP_2551 - glycosyl transferase family protein 1142 72.10 0 1196164..1197120 - 318 77463107 exoU RSP_2552 - glycosyl transferase family protein 1143 72.47 0 1197117..1198253 - 378 77463108 - RSP_2553 - hypothetical protein 1144 63.40 -1 1198599..1198751 + 50 77463109 - RSP_2554 - hypothetical protein 1145 64.75 0 1198838..1199098 + 86 77463110 - RSP_2555 - hypothetical protein 1146 72.78 0 1199109..1199582 + 157 77463111 - RSP_2556 - hypothetical protein 1147 72.73 0 1199579..1201459 + 626 77463112 asnB RSP_2557 - putative asparagine synthetase 1148 72.75 0 1201456..1202376 + 306 77463113 - RSP_2558 - Hpr(Ser) kinase/phosphatase 1149 69.74 0 1202442..1204229 + 595 77463114 - RSP_2559 - ABC transporter, fused ATPase and inner membrane subunits 1150 62.79 -1 1204363..1204620 - 85 77463115 - RSP_6060 - hypothetical protein 1151 68.61 0 1204993..1207308 - 771 77463116 exoP RSP_2561 - putative succinoglycan biosynthesis transport protein ExoP 1152 69.11 0 1207359..1208339 - 326 77463117 exoM RSP_2562 - succinoglycan biosynthesis protein exoM 1153 70.10 0 1208336..1209325 - 329 77463118 exoA RSP_2563 - glycosyl transferase family protein 1154 70.94 0 1209322..1210491 - 389 77463119 exoL RSP_2564 - glycosyltransferase, succinoglycan biosynthesis protein exoL 1155 68.37 0 1210513..1211451 - 312 77463120 ugpG RSP_2565 - UDP-glucose pyrophosphorylase 1156 71.69 0 1211807..1212622 - 271 77463121 sqdC RSP_2567 - putative sulfolipid biosynthesis protein 1157 67.82 0 1212607..1213389 - 260 77463122 sqdD RSP_2568 - glycosyl transferase (sulfolipid biosynthesis) protein 1158 64.94 0 1213444..1214658 - 404 77463123 sqdB RSP_2569 - UDP-sulfoquinovose synthase 1159 68.42 0 1214805..1215374 - 189 77463124 pfpI RSP_2570 - protease I 1160 70.42 0 1215772..1216809 + 345 77463125 - RSP_2571 - putative oxidoreductase protein 1161 67.05 0 1216964..1217755 + 263 77463126 crpK RSP_2572 - crpK, Fnr-type transcriptional regulator 1162 71.41 0 1217909..1218667 + 252 77463127 - RSP_2573 - hypothetical protein 1163 68.70 0 1218791..1219282 - 163 77463128 - RSP_2574 - hypothetical protein 1164 67.51 0 1219513..1220103 + 196 77463129 - RSP_2575 - glutathione-dependent formaldehyde-activating enzyme 1165 66.31 0 1220336..1221466 + 376 77463130 adhI RSP_2576 - alcohol dehydrogenase class III 1166 69.43 0 1221596..1222030 + 144 77463131 cycI RSP_2577 - isocytochrome c2 1167 64.67 0 1222240..1224042 + 600 77463132 xoxF RSP_2578 - putative PQQ dehydrogenase protein 1168 67.04 0 1224206..1224736 + 176 77463133 cycB RSP_2579 - cytochrome c553i 1169 69.21 0 1224724..1225548 + 274 77463134 xoxJ RSP_2580 - putative methanol oxidation protein 1170 70.64 0 1225545..1226072 + 175 77463135 - RSP_2581 - rhodanese 1171 70.00 0 1226181..1227290 + 369 77463136 - RSP_2582 - hypothetical protein 1172 65.39 0 1227335..1228273 + 312 77463137 - RSP_2583 - hypothetical protein 1173 66.44 0 1228300..1228743 + 147 77463138 - RSP_2584 - hypothetical protein 1174 62.25 -1 1228759..1229007 + 82 77463139 - RSP_2585 - hypothetical protein 1175 73.80 +1 1229004..1229732 + 242 77463140 - RSP_2586 - ABC multidrug efflux transporter, ATPase subunit 1176 67.25 0 1229729..1230589 + 286 77463141 - RSP_2587 - ABC multidrug efflux transporter, inner membrane subunit 1177 69.53 0 1230599..1231192 + 197 77463142 - RSP_2588 - hypothetical protein 1178 72.05 0 1231337..1232431 - 364 77463143 - RSP_2589 - hypothetical protein 1179 68.15 0 1232486..1233292 + 268 77463144 - RSP_2590 - hypothetical protein 1180 67.80 0 1233459..1234166 + 235 77463145 flhR RSP_2591 - two component LuxR family transcriptional regulator 1181 72.18 0 1234177..1235337 + 386 77463146 - RSP_2592 - hypothetical protein 1182 71.55 0 1235327..1236760 + 477 77463147 flhS RSP_2593 - hybrid histidine kinase 1183 73.01 +1 1236765..1237379 + 204 77463148 - RSP_2594 - hypothetical protein 1184 72.02 0 1237376..1237879 + 167 77463149 - RSP_2595 - hypothetical protein 1185 71.65 0 1237977..1238759 - 260 77463150 - RSP_2596 - ABC transporter, ATPase subunit 1186 68.81 0 1238756..1239736 - 326 77463151 - RSP_2597 - ABC transporter, periplasmic substrate-binding protein 1187 70.91 0 1239756..1240556 - 266 77463152 - RSP_2598 - ABC transporter, inner membrane subunit 1188 68.69 0 1240670..1241362 - 230 77463153 phoB RSP_2599 - phosphate regulon transcriptional regulator, PhoR 1189 65.98 0 1241362..1242087 - 241 77463154 phoU RSP_2600 - phosphate uptake regulator, PhoU 1190 67.29 0 1242098..1242895 - 265 77463155 pstB RSP_2601 - ABC phosphate transporter, ATPase subunit PstB 1191 69.70 0 1242906..1244255 - 449 77463156 pstA RSP_2602 - ABC phosphate transporter, inner membrane subunit PstA 1192 69.99 0 1244252..1245697 - 481 77463157 pstC RSP_2603 - ABC phosphate transporter, inner membrane subunit PstC 1193 65.90 0 1245756..1246799 - 347 77463158 pstS RSP_2604 - ABC phosphate transporter, periplasmic phosphate-binding protein 1194 70.43 0 1247175..1247864 - 229 77463159 - RSP_2605 - hypothetical protein 1195 66.93 0 1247875..1248258 - 127 77463160 - RSP_2606 - ArsR family transcriptional regulator 1196 72.26 0 1248295..1248795 - 166 77463161 - RSP_2607 - nitrilotriacetate monooxygenase component B 1197 68.78 0 1249031..1250026 + 331 77463162 corA RSP_2608 - Mg2+/Co2+ transporter 1198 69.55 0 1250170..1251246 - 358 77463163 dcd RSP_2609 - 2'-deoxycytidine 5'-triphosphate deaminase 1199 74.00 +1 1251470..1252315 - 281 77463164 - RSP_2610 - MerR family transcriptional regulator 1200 65.35 0 1252322..1252624 - 100 77463165 ihfA RSP_2611 - histone-like DNA-binding protein (IHF) 1201 68.83 0 1252715..1253686 - 323 77463166 fabH RSP_2612 - 3-oxoacyl-[acyl-carrier-protein] synthase III 1202 68.28 0 1253693..1254805 - 370 77463167 plsX RSP_2613 - putative glycerol-3-phosphate acyltransferase PlsX 1203 67.15 0 1254831..1255037 - 68 77463168 rpmF RSP_2614 - 50S ribosomal protein L32 1204 74.58 +1 1255215..1255808 - 197 77463169 - RSP_2615 - hypothetical protein 1205 67.27 0 1256030..1256527 + 165 77463170 - RSP_2616 - hypothetical protein 1206 67.41 0 1256620..1257024 - 134 77463171 - RSP_2617 - peptide methionine sulfoxide reductase 1207 71.18 0 1257131..1257883 + 250 77463172 - RSP_2618 - ornithine-acyl[acyl carrier protein] N-acyltransferase 1208 69.91 0 1257890..1259029 - 379 77463173 trmU RSP_2619 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1209 65.95 0 1259153..1259431 + 92 77463174 - RSP_2620 - hypothetical protein 1210 60.64 -1 1259527..1260240 + 237 77463175 ctrA RSP_2621 - two component transcriptional regulator 1211 70.35 0 1260334..1262448 + 704 77463176 ligA RSP_2622 - DNA ligase 1212 72.22 0 1262445..1264532 + 695 77463177 recG RSP_2623N - heme peroxidase 1213 60.16 -2 1264784..1264906 + 40 77463178 - RSP_2624 - hypothetical protein 1214 71.43 0 1265057..1265497 - 146 77463179 nifU RSP_2625 - NifU-related protein involved in Fe-S cluster formation 1215 67.50 0 1265563..1265922 + 119 77463180 hisI RSP_2627 - phosphoribosyl-AMP cyclohydrolase 1216 73.26 +1 1266116..1266949 - 277 77463181 gltX/glnS RSP_2628 - glutamyl-/ glutaminyl-tRNA synthetase 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0