version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1078 66.01 0 1125601..1125903 - 100 77463043 - RSP_4046 - hypothetical protein 1079 66.56 0 1126182..1127111 - 309 77463044 fbaB RSP_4045 - fructose-bisphosphate aldolase 1080 68.68 0 1127213..1128406 - 397 77463045 pgk RSP_4044 - phosphoglycerate kinase 1081 64.90 0 1128555..1129064 + 169 77463046 - RSP_4043 - peptidylprolyl isomerase 1082 68.69 0 1129054..1129647 + 197 77463047 - RSP_4042 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 1083 66.19 0 1129891..1131141 - 416 77463048 tyrS RSP_4041 - tyrosyl-tRNA synthetase 1084 74.91 +1 1131217..1132332 + 371 77463049 anmK RSP_6056 - anhydro-N-acetylmuramic acid kinase 1085 74.23 +1 1132370..1132792 - 140 77463050 - RSP_2490 - hypothetical protein 1086 68.78 0 1132955..1133191 + 78 77463051 - RSP_6057 - hypothetical protein 1087 65.41 0 1133262..1134539 - 425 77463052 eno RSP_2491 - enolase 1088 70.40 0 1134574..1135458 - 294 77463053 - RSP_2492 - RhaT family protein 1089 67.39 0 1135523..1135936 - 137 77463054 fur RSP_2494 - FUR family manganese uptake regulator 1090 66.20 0 1136518..1140174 + 1218 77463055 nrd RSP_2495 - ribonucleotide-diphosphate reductase subunit alpha 1091 66.47 0 1140547..1141047 + 166 77463056 - RSP_2496 - hypothetical protein 1092 64.37 -1 1141281..1141934 - 217 77463057 - RSP_2497 - ATPase 1093 66.08 0 1143090..1144292 + 400 77463058 - RSP_2500 - hypothetical protein 1094 71.31 0 1144947..1145786 - 279 77463059 - RSP_2501 - hypothetical protein 1095 68.98 0 1146147..1147958 - 603 77463060 glmS RSP_2502 - D-fructose-6-phosphate amidotransferase 1096 69.30 0 1147958..1149322 - 454 77463061 glmU RSP_2503 - UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase 1097 70.14 0 1149423..1150112 + 229 77463062 gph RSP_2504 - phosphoglycolate phosphatase 1098 66.84 0 1150144..1150704 - 186 77463063 creA RSP_2505 - CreA family protein 1099 66.58 0 1150728..1151885 + 385 77463064 ivdH RSP_2506 - isovaleryl-CoA dehydrogenase 1100 65.20 0 1151976..1152587 - 203 77463065 ompW RSP_2507 - outer membrane protein 1101 70.48 0 1152653..1154329 + 558 77463066 mccB RSP_2508 - methylcrotonyl-CoA carboxylase beta chain 1102 73.62 +1 1154426..1156366 + 646 77463067 mccA RSP_2509 - 3-methylcrotonoyl-CoA carboxylase, alpha subunit 1103 73.90 +1 1156359..1157243 + 294 77463068 hmgL RSP_2510 - hydroxymethylglutaryl-CoA lyase 1104 72.62 0 1157256..1158044 + 262 77463069 - RSP_2511 - enoyl-CoA hydratase 1105 59.84 -2 1158265..1158630 + 121 77463070 nuoA RSP_2512 - NADH dehydrogenase subunit A 1106 67.24 0 1158627..1159151 + 174 77463071 nuoB RSP_2513 - NADH dehydrogenase subunit B 1107 64.84 0 1159162..1159764 + 200 77463072 nuoC RSP_2514 - NADH dehydrogenase subunit C 1108 65.27 0 1159769..1160983 + 404 77463073 nuoD RSP_2515 - NADH dehydrogenase subunit D 1109 70.07 0 1160983..1161894 + 303 77463074 nuoE RSP_2516 - NADH dehydrogenase subunit E 1110 69.95 0 1161894..1162106 + 70 77463075 - RSP_2517 - hypothetical protein 1111 67.28 0 1162117..1163412 + 431 77463076 nuoF RSP_2518 - NADH dehydrogenase I subunit F 1112 78.89 +2 1163417..1163776 + 119 77463077 - RSP_2519 - hypothetical protein 1113 69.57 0 1163936..1165900 + 654 77463078 nuoG RSP_2521 - NADH dehydrogenase subunit G 1114 68.61 0 1165904..1166314 + 136 77463079 - RSP_2520 - hypothetical protein 1115 63.20 -1 1166342..1167379 + 345 77463080 nuoH RSP_2522 - NADH dehydrogenase subunit H 1116 64.09 -1 1167381..1167884 + 167 77463081 nuoI RSP_2523 - NADH dehydrogenase subunit I 1117 63.02 -1 1167881..1168291 + 136 77463082 - RSP_2524 - carboxymuconolactone decarboxylase family protein 1118 65.85 0 1168288..1168902 + 204 77463083 nuoJ RSP_2525 - NADH dehydrogenase subunit J 1119 60.78 -1 1169062..1169367 + 101 77463084 nuoK RSP_2526 - NADH dehydrogenase subunit K 1120 65.83 0 1169373..1171535 + 720 77463085 nuoL RSP_2527 - NADH dehydrogenase subunit L 1121 64.20 -1 1171535..1173076 + 513 77463086 nuoM RSP_2529 - NADH dehydrogenase subunit M 1122 66.46 0 1173087..1174523 + 478 77463087 nuoN RSP_2530 - NADH dehydrogenase subunit N 1123 73.25 +1 1174540..1175268 + 242 77463088 birA RSP_2532 - putative biotin protein ligase 1124 64.47 -1 1175279..1176052 + 257 77463089 - RSP_2533 - pantothenate kinase 1125 68.10 0 1176049..1177722 + 557 77463090 - RSP_2534 - metallo-beta-lactamase superfamily hydrolase 1126 69.11 0 1178520..1180076 - 518 77463091 rhlE RSP_2536 - ATP-dependent helicase, DEAD-box 1127 66.42 0 1180302..1181906 - 534 77463092 prfC RSP_2537 - peptide chain release factor 3 1128 71.67 0 1182066..1182845 + 259 77463093 fabG RSP_2538 - Short-chain dehydrogenase/reductase 1129 70.36 0 1182882..1184018 + 378 77463094 - RSP_2539 - ABC transporter, ATPase subunit 1130 61.50 -1 1184186..1184398 + 70 77463095 tatA RSP_2540 - twin-arginine translocation system protein, TatA 1131 71.70 0 1184409..1184885 + 158 77463096 tatB RSP_6059 - twin-arginine translocation system protein, TatB 1132 63.10 -1 1184882..1185751 + 289 77463097 tatC RSP_2541 - twin-arginine translocation system protein, TatC 1133 68.45 0 1185748..1186587 + 279 77463098 - RSP_2542 - ATPase 1134 72.50 0 1186682..1187881 - 399 77463099 - RSP_2543 - peptidoglycan-binding LysM ( peptidase) 1135 68.33 0 1188005..1188664 - 219 77463100 - RSP_2544 - protein-L-isoaspartate O-methyltransferase 1136 71.25 0 1188661..1189446 - 261 77463101 surE RSP_2545 - 5'-nucleotidase / 3'-nucleotidase / exopolyphosphatase 1137 69.93 0 1190333..1190944 + 203 77463102 exoY RSP_2547 - exopolysaccharide production protein exoY 1138 69.99 0 1191016..1192248 + 410 77463103 exoF RSP_2548 - Outer membrane polysaccharide export protein, exoF 1139 69.46 0 1192424..1193713 - 429 77463104 exoQ RSP_2549 - putative polysaccharide polymerase 1140 65.01 0 1193730..1194512 - 260 77463105 exoK RSP_2550 - endo-beta-1,3-1,4-glycanase protein 1141 72.75 0 1194718..1196148 + 476 77463106 exoO RSP_2551 - glycosyl transferase family protein 1142 72.10 0 1196164..1197120 - 318 77463107 exoU RSP_2552 - glycosyl transferase family protein 1143 72.47 0 1197117..1198253 - 378 77463108 - RSP_2553 - hypothetical protein 1144 63.40 -1 1198599..1198751 + 50 77463109 - RSP_2554 - hypothetical protein 1145 64.75 0 1198838..1199098 + 86 77463110 - RSP_2555 - hypothetical protein 1146 72.78 0 1199109..1199582 + 157 77463111 - RSP_2556 - hypothetical protein 1147 72.73 0 1199579..1201459 + 626 77463112 asnB RSP_2557 - putative asparagine synthetase 1148 72.75 0 1201456..1202376 + 306 77463113 - RSP_2558 - Hpr(Ser) kinase/phosphatase 1149 69.74 0 1202442..1204229 + 595 77463114 - RSP_2559 - ABC transporter, fused ATPase and inner membrane subunits 1150 62.79 -1 1204363..1204620 - 85 77463115 - RSP_6060 - hypothetical protein 1151 68.61 0 1204993..1207308 - 771 77463116 exoP RSP_2561 - putative succinoglycan biosynthesis transport protein ExoP 1152 69.11 0 1207359..1208339 - 326 77463117 exoM RSP_2562 - succinoglycan biosynthesis protein exoM 1153 70.10 0 1208336..1209325 - 329 77463118 exoA RSP_2563 - glycosyl transferase family protein 1154 70.94 0 1209322..1210491 - 389 77463119 exoL RSP_2564 - glycosyltransferase, succinoglycan biosynthesis protein exoL 1155 68.37 0 1210513..1211451 - 312 77463120 ugpG RSP_2565 - UDP-glucose pyrophosphorylase 1156 71.69 0 1211807..1212622 - 271 77463121 sqdC RSP_2567 - putative sulfolipid biosynthesis protein 1157 67.82 0 1212607..1213389 - 260 77463122 sqdD RSP_2568 - glycosyl transferase (sulfolipid biosynthesis) protein 1158 64.94 0 1213444..1214658 - 404 77463123 sqdB RSP_2569 - UDP-sulfoquinovose synthase 1159 68.42 0 1214805..1215374 - 189 77463124 pfpI RSP_2570 - protease I 1160 70.42 0 1215772..1216809 + 345 77463125 - RSP_2571 - putative oxidoreductase protein 1161 67.05 0 1216964..1217755 + 263 77463126 crpK RSP_2572 - crpK, Fnr-type transcriptional regulator 1162 71.41 0 1217909..1218667 + 252 77463127 - RSP_2573 - hypothetical protein 1163 68.70 0 1218791..1219282 - 163 77463128 - RSP_2574 - hypothetical protein 1164 67.51 0 1219513..1220103 + 196 77463129 - RSP_2575 - glutathione-dependent formaldehyde-activating enzyme 1165 66.31 0 1220336..1221466 + 376 77463130 adhI RSP_2576 - alcohol dehydrogenase class III 1166 69.43 0 1221596..1222030 + 144 77463131 cycI RSP_2577 - isocytochrome c2 1167 64.67 0 1222240..1224042 + 600 77463132 xoxF RSP_2578 - putative PQQ dehydrogenase protein 1168 67.04 0 1224206..1224736 + 176 77463133 cycB RSP_2579 - cytochrome c553i 1169 69.21 0 1224724..1225548 + 274 77463134 xoxJ RSP_2580 - putative methanol oxidation protein 1170 70.64 0 1225545..1226072 + 175 77463135 - RSP_2581 - rhodanese 1171 70.00 0 1226181..1227290 + 369 77463136 - RSP_2582 - hypothetical protein 1172 65.39 0 1227335..1228273 + 312 77463137 - RSP_2583 - hypothetical protein 1173 66.44 0 1228300..1228743 + 147 77463138 - RSP_2584 - hypothetical protein 1174 62.25 -1 1228759..1229007 + 82 77463139 - RSP_2585 - hypothetical protein 1175 73.80 +1 1229004..1229732 + 242 77463140 - RSP_2586 - ABC multidrug efflux transporter, ATPase subunit 1176 67.25 0 1229729..1230589 + 286 77463141 - RSP_2587 - ABC multidrug efflux transporter, inner membrane subunit 1177 69.53 0 1230599..1231192 + 197 77463142 - RSP_2588 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0