version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 988 68.77 0 1022619..1023662 + 347 77462953 - RSP_2395 - BCCP, cytochrome c peroxidase 989 70.06 0 1023737..1024738 - 333 77462954 - RSP_2396 - hypothetical protein 990 65.10 0 1025030..1026049 - 339 77462955 - RSP_2397 - ABC putrescine transporter, periplasmic substrate-binding subunit 991 66.54 0 1026077..1026877 - 266 77462956 - RSP_2398 - ABC putrescine transporter, inner membrane subunit 992 65.77 0 1026870..1027763 - 297 77462957 - RSP_2399 - ABC putrescine transporter, inner membrane subunit 993 72.44 0 1027765..1028769 - 334 77462958 - RSP_2400 - ABC putrescine transporter, ATPase subunit 994 74.07 +1 1028860..1030317 - 485 77462959 - RSP_2401 - putative 6-aminohexanoate-cyclic-dimer hydrolase 995 69.50 0 1030777..1032612 + 611 77462960 - RSP_2402 - putative TonB dependent vitamin B12 outer membrane receptor 996 71.54 0 1032599..1033459 + 286 77462961 - RSP_2403 - ABC cobalamin/Fe3+-siderophore transporter, periplasmic substrate-binding subunit 997 72.12 0 1033456..1034445 + 329 77462962 - RSP_2404 - ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit 998 74.10 +1 1034442..1035194 + 250 77462963 - RSP_2405 - ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit 999 75.76 +1 1035191..1035850 + 219 77462964 - RSP_2406 - hypothetical protein 1000 71.51 0 1035995..1037728 - 577 77462965 - RSP_2407 - periplasmic sensor hybrid histidine kinase 1001 70.73 0 1037772..1038017 - 81 77462966 - RSP_2408 - hypothetical protein 1002 71.33 0 1038091..1039140 + 349 77462967 rluD RSP_2409 - ribosomal large subunit pseudouridine synthase D 1003 66.11 0 1039301..1040197 + 298 77462968 rpoH1 RSP_2410 - RNA polymerase factor sigma-32 1004 70.79 0 1040755..1041555 - 266 77462969 - RSP_2411 - hypothetical protein 1005 66.06 0 1041640..1043460 - 606 77462970 pepF RSP_2412 - oligoendopeptidase F 1006 70.35 0 1043632..1045233 - 533 77462971 lig2 RSP_2413 - ATP-dependent DNA ligase 1007 71.88 0 1045230..1046381 - 383 77462972 - RSP_2414 - hypothetical protein 1008 66.24 0 1046578..1047969 + 463 77462973 - RSP_2415 - hypothetical protein 1009 65.93 0 1047977..1048927 + 316 77462974 - RSP_2416 - hypothetical protein 1010 72.47 0 1048924..1049733 + 269 77462975 - RSP_2417 - hypothetical protein 1011 65.15 0 1049765..1050490 + 241 77462976 - RSP_2420 - hypothetical protein 1012 72.85 0 1050480..1051433 - 317 77462977 pldB RSP_2418 - putative esterase/lipase/thioesterase 1013 65.61 0 1051430..1051714 - 94 77462978 - RSP_2419 - hypothetical protein 1014 68.24 0 1051790..1052362 + 190 77462979 - RSP_2421 - hypothetical protein 1015 69.96 0 1052447..1055239 + 930 77462980 mgpS RSP_2422 - putative ATP-dependent helicase, MgpS 1016 71.04 0 1055245..1055541 + 98 77462981 - RSP_2423 - putative heat shock protein 15 (HSP15) 1017 62.24 -1 1055596..1055934 + 112 77462982 - RSP_2424 - ferredoxin II 1018 65.69 0 1056214..1056723 + 169 77462983 - RSP_2425 - CarD family transcriptional regulator 1019 77.87 +2 1056911..1057660 - 249 77462984 cobV RSP_2427 - cobalamin-5'-phosphate synthase 1020 73.25 +1 1057742..1058758 + 338 77462985 cobT RSP_2428 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 1021 69.67 0 1058814..1060742 - 642 77462986 - RSP_2429 - glutathione-regulated potassium-efflux system protein, kefB 1022 73.83 +1 1060857..1063733 - 958 77462987 - RSP_6052 - hypothetical protein 1023 69.25 0 1063855..1064589 + 244 77462988 - RSP_2430 - hypothetical protein 1024 66.74 0 1064635..1065927 - 430 77462989 - RSP_2431 - putative O-acetylhomoserine sulfhydrylase 1025 65.52 0 1066170..1066517 - 115 77462990 - RSP_2432 - hypothetical protein 1026 57.11 -2 1066514..1066900 - 128 77462991 cheY2 RSP_2433 - chemotaxis response regulator, CheY2 1027 62.31 -1 1066878..1067795 - 305 77462992 cheR1 RSP_2434 - putative MCP methyltransferase, CheR1 1028 61.44 -1 1067792..1068250 - 152 77462993 cheW1 RSP_2435 - putative chemotaxis scaffold protein, CheW1 1029 63.85 -1 1068252..1070312 - 686 77462994 cheA1 RSP_2436 - chemotaxis histidine protein kinase, CheA1 1030 63.41 -1 1070320..1070688 - 122 77462995 cheY1 RSP_2437 - chemotaxis response regulator, CheY1 1031 62.46 -1 1070679..1070963 - 94 77462996 cheX RSP_2438 - putative CheX protein 1032 61.17 -1 1070960..1071559 - 199 77462997 cheD RSP_2439 - chemoreceptor glutamine deamidase CheD 1033 64.16 -1 1071682..1073994 - 770 77462998 mcpA RSP_2440 - methyl accepting chemotaxis protein 1034 67.17 0 1074101..1075888 - 595 77462999 tlpS RSP_2441 - methyl-accepting chemotaxis sensory transducer 1035 68.09 0 1075992..1077674 - 560 77463000 mcpB RSP_2442 - methyl accepting chemotaxis protein, McpB 1036 65.31 0 1077763..1078131 - 122 77463001 cheY5 RSP_2443 - putative chemotaxis response regulator, CheY5 1037 74.85 +1 1078128..1078457 - 109 77463002 - RSP_2444 - hypothetical protein 1038 64.90 0 1078538..1080742 + 734 77463003 - RSP_2445 - putative Alpha amylase 1039 67.82 0 1080739..1084047 + 1102 77463004 - RSP_2446 - putative trehalose synthase 1040 67.95 0 1084044..1086230 + 728 77463005 glgB1 RSP_2448 - glycogen branching enzyme 1041 67.05 0 1086227..1088293 + 688 77463006 - RSP_2449 - putative glycosyl hydrolase 1042 68.75 0 1088290..1090068 + 592 77463007 - RSP_2450 - putative Alpha-amylase 1043 70.96 0 1090065..1091882 + 605 77463008 - RSP_2451 - putative 4-alpha-glucanotransferase 1044 69.46 0 1091879..1094494 + 871 77463009 - RSP_2452 - alpha amylase domain-containing protein 1045 71.17 0 1094553..1095218 - 221 77463010 - RSP_2453 - putative oxidoreductase (NAD/NADP dependent) 1046 67.14 0 1095338..1096801 - 487 77463011 purF RSP_2454 - amidophosphoribosyltransferase 1047 69.59 0 1096886..1097500 - 204 77463012 - RSP_2455 - putative colicin V production protein, dedE 1048 70.64 0 1097519..1098877 - 452 77463013 radA RSP_2456 - DNA repair protein RadA 1049 68.78 0 1099010..1099435 - 141 77463014 - RSP_2457 - hypothetical protein 1050 67.07 0 1099436..1100182 - 248 77463015 - RSP_2458 - ABC transporter, ATPase subunit 1051 70.11 0 1100179..1100961 - 260 77463016 - RSP_2459 - ABC transporter, inner membrane subunit 1052 71.33 0 1100958..1102007 - 349 77463017 alr RSP_2460 - alanine racemase 1053 69.24 0 1102236..1102973 + 245 77463018 fabG RSP_2461 - 3-oxoacyl-[acyl-carrier-protein] reductase 1054 60.26 -2 1103152..1103385 + 77 77463019 acpP RSP_2463 - acyl carrier protein 1055 69.20 0 1103882..1105144 + 420 77463020 fabF RSP_2464 - 3-oxoacyl-(acyl carrier protein) synthase II 1056 70.73 0 1105141..1106322 + 393 77463021 - RSP_2465 - hypothetical protein 1057 67.41 0 1106432..1106836 + 134 77463022 - RSP_2466 - hypothetical protein 1058 73.98 +1 1106883..1108127 + 414 77463023 - RSP_2467 - putative large terminase 1059 70.41 0 1108200..1109375 + 391 77463024 - RSP_2468 - putative portal protein 1060 67.95 0 1109377..1109610 + 77 77463025 - RSP_2469 - hypothetical protein 1061 70.92 0 1109615..1110178 + 187 77463026 - RSP_2470 - prohead peptidase 1062 66.50 0 1110244..1111440 + 398 77463027 - RSP_2471 - phage phi-C31 gp36 major capsid-like protein 1063 69.83 0 1111535..1112134 + 199 77463028 - RSP_2472 - hypothetical protein 1064 71.73 0 1112134..1112469 + 111 77463029 - RSP_6053 - putative phage tail-head adaptor 1065 71.93 0 1112466..1112864 + 132 77463030 - RSP_6054 - hypothetical protein 1066 67.63 0 1112902..1113315 + 137 77463031 - RSP_2473 - hypothetical protein 1067 73.41 +1 1113315..1113833 + 172 77463032 - RSP_2474 - hypothetical protein 1068 71.50 0 1113856..1114476 + 206 77463033 - RSP_2475 - putative phage tail minor protein 1069 67.77 0 1114486..1115118 + 210 77463034 - RSP_2476 - hypothetical protein 1070 66.55 0 1115118..1116002 + 294 77463035 - RSP_2477 - hypothetical protein 1071 68.25 0 1115999..1116439 + 146 77463036 - RSP_2478 - hypothetical protein 1072 69.44 0 1116439..1120329 + 1296 77463037 - RSP_2479 - putative phage host specificity protein 1073 69.32 0 1120333..1120746 + 137 77463038 - RSP_2480 - hypothetical protein 1074 66.79 0 1120739..1121545 + 268 77463039 cysE RSP_2481 - serine O-acetyltransferase 1075 69.30 0 1121645..1122973 - 442 77463040 pdhB RSP_4050 - branched-chain alpha-keto acid dehydrogenase subunit E2 1076 66.74 0 1122984..1124375 - 463 77463041 pdhAb RSP_4049 - pyruvate dehydrogenase subunit beta 1077 65.15 0 1124389..1125378 - 329 77463042 pdhAa RSP_4047 - pyruvate dehydrogenase E1 component, alpha subunit 1078 66.01 0 1125601..1125903 - 100 77463043 - RSP_4046 - hypothetical protein 1079 66.56 0 1126182..1127111 - 309 77463044 fbaB RSP_4045 - fructose-bisphosphate aldolase 1080 68.68 0 1127213..1128406 - 397 77463045 pgk RSP_4044 - phosphoglycerate kinase 1081 64.90 0 1128555..1129064 + 169 77463046 - RSP_4043 - peptidylprolyl isomerase 1082 68.69 0 1129054..1129647 + 197 77463047 - RSP_4042 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 1083 66.19 0 1129891..1131141 - 416 77463048 tyrS RSP_4041 - tyrosyl-tRNA synthetase 1084 74.91 +1 1131217..1132332 + 371 77463049 anmK RSP_6056 - anhydro-N-acetylmuramic acid kinase 1085 74.23 +1 1132370..1132792 - 140 77463050 - RSP_2490 - hypothetical protein 1086 68.78 0 1132955..1133191 + 78 77463051 - RSP_6057 - hypothetical protein 1087 65.41 0 1133262..1134539 - 425 77463052 eno RSP_2491 - enolase 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0