version 1.0
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence - 1..3188609 3022 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 54 66.88 0 66162..67085 - 307 77462019 OppB RSP_1480 - ABC oligopeptide transporter, inner membrane subunit OppB 55 65.28 0 67142..68731 - 529 77462020 OppA RSP_1481 - ABC oligopeptide transporter, perplasmic substrate-binding protein OppA 56 73.33 +1 69574..69933 + 119 77462021 - RSP_1483 - hypothetical protein 57 77.33 +2 70003..70527 - 174 77462022 - RSP_1484 - hypothetical protein 58 72.69 0 70529..72337 - 602 77462023 - RSP_1485 - ATP-dependent RNA helicase 59 72.77 0 72528..73133 + 201 77462024 - RSP_1486 - TetR family transcriptional regulator 60 63.51 -1 73200..73547 + 115 77462025 - RSP_1487 - hypothetical protein 61 72.18 0 73549..74292 + 247 77462026 - RSP_1488 - glyoxalase 62 68.52 0 74424..75338 + 304 77462027 - RSP_1489 - thioredoxin domain-containing protein 63 66.97 0 75342..76010 + 222 77462028 - RSP_1490 - putative ATP-dependent protease La, LON 64 67.22 0 76007..76186 + 59 77462029 - RSP_1491 - hypothetical protein 65 73.82 +1 76263..77492 - 409 77462030 - RSP_1492 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase 66 74.68 +1 77589..78899 + 436 77462031 - RSP_1493 - amidase 67 70.06 0 79022..80200 + 392 77462032 - RSP_1494 - aminotransferase 68 70.14 0 80211..83495 + 1094 77462033 - RSP_1495 - DNA translocase FtsK 69 66.67 0 83627..84265 + 212 77462034 - RSP_1497 - putative outer membrane lipoprotein carrier protein 70 66.84 0 84326..84907 - 193 77462035 - RSP_1496 - hypothetical protein 71 60.66 -1 85139..85504 + 121 77462036 - RSP_1498 - hypothetical protein 72 69.90 0 85545..87122 - 525 77462037 - RSP_1499 - gamma-glutamyltransferase 2 73 72.38 0 87234..87776 - 180 77462038 - RSP_1500 - anti-sigma regulatory kinase 74 67.24 0 87766..88113 - 115 77462039 - RSP_1501 - anti-sigma-factor antagonist domain-containing protein 75 69.09 0 88207..88659 + 150 77462040 - RSP_1502 - GAF domain-containing protein 76 68.44 0 88711..89049 + 112 77462041 - RSP_1503 - hypothetical protein 77 62.84 -1 89065..89325 - 86 77462042 - RSP_1504 - hypothetical protein 78 68.83 0 89409..90056 + 215 77462043 - RSP_1506 - ribosomal large subunit pseudouridine synthase A 79 72.88 0 90032..90787 - 251 77462044 - RSP_1505 - putative metallo-phosphoesterase 80 69.34 0 90784..92244 - 486 77462045 - RSP_1507 - aldehyde dehydrogenase 81 68.88 0 92948..94396 - 482 77462046 - RSP_1508 - hypothetical protein 82 75.96 +1 94407..95708 - 433 77462047 - RSP_6207 - hypothetical protein 83 76.34 +1 95776..96519 - 247 77462048 - RSP_6208 - hypothetical protein 84 74.25 +1 96592..97686 + 364 77462049 - RSP_1509 - O-sialoglycoprotein endopeptidase 85 74.51 +1 97683..98600 + 305 77462050 - RSP_1510 - putative glycerol-3-phosphate dehydrogenase (NAD(P)+) 86 68.86 0 98604..98876 + 90 77462051 - RSP_1511 - YciI-like protein 87 68.12 0 98876..99289 + 137 77462052 - RSP_1512 - hypothetical protein 88 67.83 0 99597..100802 + 401 77462053 trpB RSP_1513 - tryptophan synthase subunit beta 89 64.80 0 100961..102352 - 463 77462054 ahcY RSP_1514 - S-adenosyl-L-homocysteine hydrolase 90 64.16 -1 102475..103431 + 318 77462055 - RSP_1515 - hypothetical protein 91 67.18 0 103428..104012 + 194 77462056 - RSP_1516 - putative S-adenosyl L-homocystein hydrolase 92 62.22 -1 104024..104338 - 104 77462057 spbA RSP_1517 - HNS family histone-like protein 93 68.11 0 104574..105128 - 184 77462058 prrA RSP_1518 - PrrA (RegA), response regulator involved in oxygen regulation of photosynthesis genes 94 62.93 -1 105121..105816 - 231 77462059 prrC RSP_1519 - PrrC 95 68.11 0 105908..107296 + 462 77462060 prrB RSP_1520 - sensor histidine kinase PrrB (RegB) 96 71.47 0 107423..108985 + 520 77462061 - RSP_1521 - hypothetical protein 97 74.28 +1 109269..109754 + 161 77462062 - RSP_1522 - hypothetical protein 98 76.02 +1 109747..110772 + 341 77462063 - RSP_1523 - hypothetical protein 99 71.32 0 110754..111419 + 221 77462064 - RSP_1524 - nucleotidyltransferase family protein 100 74.82 +1 111412..114405 + 997 77462065 - RSP_1525 - putative helicase/exonuclease 101 72.87 0 114434..117754 + 1106 77462066 - RSP_1527 - UvrD/Rep family helicase 102 66.04 0 117813..118133 + 106 77462067 trxA RSP_1529 - thioredoxin 103 67.22 0 118266..119174 - 302 77462068 - RSP_1530 - hypothetical protein 104 69.53 0 119311..119868 + 185 77462069 - RSP_1531 - ATP-dependent protease peptidase subunit 105 66.59 0 119865..121166 + 433 77462070 hslU RSP_1532 - ATP-dependent protease ATP-binding subunit 106 65.56 0 121217..122749 - 510 77462071 - RSP_1533 - putative alginate O-acetyltransferase 107 61.79 -1 122749..122994 - 81 77462072 - RSP_1534 - putative acyl carrier protein 108 71.16 0 123055..124968 - 637 77462073 - RSP_1535 - hypothetical protein 109 76.65 +1 124949..125689 - 246 77462074 - RSP_6005 - putative short chain dehydrogenase 110 68.15 0 125686..126090 - 134 77462075 - RSP_1536 - hypothetical protein 111 66.12 0 126368..127282 + 304 77462076 - RSP_1537 - hypothetical protein 112 63.44 -1 127361..128134 + 257 77462077 - RSP_1538 - glucose-1-phosphate cytidylyltransferase 113 68.95 0 128370..129377 - 335 77462078 - RSP_1539 - glycosyl transferase family protein 114 71.51 0 129719..130813 - 364 77462079 - RSP_1540 - secreted hydrolase 115 73.37 +1 130803..133190 - 795 77462080 - RSP_1541 - ABC transporter inner membrane protein 116 72.39 0 133187..133867 - 226 77462081 - RSP_1542 - ABC transporter, ATPase subunit 117 74.22 +1 134153..135211 - 352 77462082 - RSP_1543 - hypothetical protein 118 74.44 +1 135213..136202 - 329 77462083 - RSP_1544 - signal peptide protein 119 71.31 0 136202..137710 - 502 77462084 - RSP_1545 - thiol oxidoreductase with 2 cytochrome c heme-binding sites 120 61.93 -1 137889..138374 - 161 77462085 bfr RSP_1546 - bacterioferritin 121 64.31 -1 138364..138618 - 84 77462086 - RSP_1547 - bacterioferritin-associated ferredoxin 122 69.03 0 138700..139968 - 422 77462087 - RSP_1548 - imelysin 123 63.58 -1 140022..140183 - 53 77462088 - RSP_6006 - hypothetical protein 124 73.83 +1 140534..141217 + 227 77462089 - RSP_1549 - hypothetical protein 125 71.60 0 141230..142060 - 276 77462090 - RSP_1550 - IclR family transcriptional regulator 126 68.50 0 142328..142708 + 126 77462091 - RSP_1551 - putative glyoxalase family protein 127 73.98 +1 142826..143317 - 163 77462092 - RSP_1552 - ureidoglycolate hydrolase 128 69.30 0 143434..144270 - 278 77462093 - RSP_1553 - hypothetical protein 129 68.36 0 144267..145682 - 471 77462094 - RSP_1554 - polysaccharide deacetylase 130 72.32 0 145829..146182 + 117 77462095 - RSP_1555 - transthyretin-like protein 131 66.67 0 146426..146581 + 51 77462096 puc2B RSP_1556 - light-harvesting complex, beta subunit 132 72.47 0 146595..147386 + 263 77462097 puc2A RSP_6158 - light-harvesting complex alpha subunit 133 64.86 0 147831..149045 + 404 77462098 icd RSP_1559 - isocitrate dehydrogenase 134 71.58 0 148997..150340 - 447 77462099 - RSP_1558 - 2-dehydropantoate 2-reductase 135 71.16 0 150337..151872 - 511 77462100 - RSP_1561 - AMP-forming acyl-CoA synthetase/ligase 136 69.29 0 152005..152691 - 228 77462101 - RSP_1562 - fumarylacetoacetate hydrolase family protein 137 72.32 0 152758..153765 - 335 77462102 - RSP_1563 - putative oxidoreductase 138 68.22 0 153818..155038 - 406 77462103 - RSP_1564 - putative transmembrane transport protein 139 70.58 0 155130..156482 - 450 77462104 appA RSP_1565 - AppA, antirepressor of ppsR, sensor of blue light 140 75.36 +1 156951..157640 + 229 77462105 - RSP_1566 - hypothetical protein 141 71.42 0 157676..160243 - 855 77462106 - RSP_1567 - sensory transduction histidine kinase 142 69.30 0 160311..161717 - 468 77462107 - RSP_1568 - L-glutamine synthetase 143 71.32 0 161714..163087 - 457 77462108 - RSP_1569 - aminotransferase 144 70.64 0 163084..164166 - 360 77462109 purK RSP_1570 - phosphoribosylaminoimidazole carboxylase ATPase subunit 145 70.37 0 164159..164644 - 161 77462110 purE RSP_1571 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 146 63.01 -1 164880..165098 - 72 77462111 - RSP_6218 - hypothetical protein 147 65.60 0 165426..165893 + 155 77462112 - RSP_1572 - HSP20 family protein 148 65.33 0 165890..166114 + 74 77462113 - RSP_1573 - hypothetical protein 149 67.09 0 166389..166865 + 158 77462114 - RSP_1574 - cytochrome b562 150 65.87 0 166955..168718 - 587 77462115 sopT RSP_1575 - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 151 68.76 0 168853..169806 - 317 77462116 trxB RSP_1576 - thioredoxin reductase 152 67.27 0 170014..170514 + 166 77462117 putR RSP_1577 - AsnC family transcriptional regulator 153 72.24 0 170637..171389 - 250 77462118 - RSP_1578 - hypothetical protein 68.78 MEAN 4.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.