version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 447 60.47 -1 517715..518053 - 112 91974929 - RPD_0449 - nitrogen regulatory protein P-II 448 64.76 0 518377..518691 - 104 91974930 - RPD_0450 - hypothetical protein 449 64.60 0 519000..519338 - 112 91974931 - RPD_0451 - nitrogen regulatory protein P-II 450 65.08 0 519615..520496 - 293 91974932 - RPD_0452 - acyl-CoA thioesterase II 451 69.24 +1 520635..521954 + 439 91974933 - RPD_0453 - 2-octaprenyl-6-methoxyphenyl hydroxylase 452 66.16 0 522175..522372 - 65 91974934 - RPD_0454 - hypothetical protein 453 63.85 0 522466..523140 - 224 91974935 - RPD_0455 - peptidase S16, lon-like 454 68.19 0 523270..524190 - 306 91974936 - RPD_0456 - thioredoxin 455 68.05 0 524645..525583 - 312 91974937 - RPD_0457 - LysR, substrate-binding 456 67.33 0 525665..526414 + 249 91974938 - RPD_0458 - hypothetical protein 457 64.88 0 526524..527306 - 260 91974939 - RPD_0459 - histidine kinase, HAMP region 458 66.67 0 528003..528995 + 330 91974940 - RPD_0460 - AppA/PpaA family photosynthesis gene regulator 459 69.24 +1 529350..530435 + 361 91974941 - RPD_0461 - hypothetical protein 460 67.67 0 530582..531880 - 432 91974942 - RPD_0462 - ribulose-bisphosphate carboxylase 461 65.03 0 532026..532454 - 142 91974943 - RPD_0463 - hypothetical protein 462 68.13 0 532736..534718 + 660 91974944 - RPD_0464 - acyltransferase 3 463 63.95 0 534811..535989 - 392 91974945 - RPD_0465 - alginate o-acetyltransferase AlgJ 464 65.32 0 535992..537404 - 470 91974946 - RPD_0466 - membrane bound O-acyl transferase, MBOAT 465 71.48 +1 537900..539666 - 588 91974947 - RPD_0467 - HemY-like 466 71.88 +1 539674..541113 - 479 91974948 - RPD_0468 - hypothetical protein 467 68.28 0 541174..541917 - 247 91974949 - RPD_0469 - uroporphyrinogen III synthase HEM4 468 69.57 +1 542016..543185 + 389 91974950 - RPD_0470 - O-sialoglycoprotein endopeptidase 469 70.30 +1 543222..544211 + 329 91974951 gpsA RPD_0471 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 470 62.32 0 544215..544628 + 137 91974952 - RPD_0472 - hypothetical protein 471 68.73 +1 544799..545476 + 225 91974953 - RPD_0473 - hypothetical protein 472 65.69 0 545958..547910 + 650 91974954 - RPD_0474 - acetyl-CoA synthetase 473 66.48 0 548292..548819 + 175 91974955 - RPD_0475 - ErfK/YbiS/YcfS/YnhG 474 74.83 +2 548928..551021 - 697 91974956 - RPD_0476 - OmpA/MotB 475 61.55 0 551564..552052 - 162 91974957 - RPD_0477 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 476 63.09 0 552188..552970 - 260 91974958 sdhB RPD_0478 - succinate dehydrogenase iron-sulfur subunit 477 67.00 0 553099..554922 - 607 91974959 sdhA RPD_0479 - succinate dehydrogenase flavoprotein subunit 478 63.59 0 554926..555348 - 140 91974960 - RPD_0480 - succinate dehydrogenase, cytochrome b subunit 479 62.05 0 555345..555734 - 129 91974961 - RPD_0481 - succinate dehydrogenase, cytochrome b subunit 480 65.50 0 555966..557084 + 372 91974962 - RPD_0482 - cation diffusion facilitator family transporter 481 66.53 0 557384..558895 - 503 91974963 - RPD_0483 - malonyl-CoA synthase 482 67.33 0 558984..559733 + 249 91974964 - RPD_0484 - short-chain dehydrogenase/reductase SDR 483 64.27 0 560248..560832 + 194 91974965 - RPD_0485 - beta-Ig-H3/fasciclin 484 62.33 0 561057..561701 + 214 91974966 - RPD_0486 - hypothetical protein 485 62.31 0 561704..562483 + 259 91974967 - RPD_0487 - twin-arginine translocation pathway signal 486 66.09 0 562633..563151 + 172 91974968 - RPD_0488 - superoxide dismutase, copper/zinc binding 487 68.86 +1 563283..564467 - 394 91974969 - RPD_0489 - major facilitator transporter 488 66.22 0 564693..565805 + 370 91974970 - RPD_0490 - 3-isopropylmalate dehydrogenase 489 68.24 0 565977..566357 - 126 91974971 - RPD_0491 - hypothetical protein 490 71.79 +1 566522..567340 - 272 91974972 - RPD_0492 - hypothetical protein 491 62.51 0 567499..568533 + 344 91974973 - RPD_0493 - aspartate-semialdehyde dehydrogenase 492 62.08 0 568675..569241 + 188 91974974 - RPD_0494 - hypothetical protein 493 64.65 0 569490..570134 - 214 91974975 - RPD_0495 - carbonate dehydratase 494 67.92 0 570335..571213 + 292 91974976 - RPD_0496 - Citryl-CoA lyase 495 64.65 0 571384..573117 - 577 91974977 - RPD_0497 - chemotaxis sensory transducer 496 61.22 -1 573397..574002 - 201 91974978 leuD RPD_0498 - isopropylmalate isomerase small subunit 497 62.19 0 574093..574494 - 133 91974979 - RPD_0499 - hypothetical protein 498 70.50 +1 574610..574948 + 112 91974980 - RPD_0500 - hypothetical protein 499 67.35 0 575449..575742 + 97 91974981 - RPD_0501 - hypothetical protein 500 66.04 0 575878..576198 + 106 91974982 - RPD_0502 - hypothetical protein 501 68.80 +1 576327..577028 + 233 91974983 - RPD_0503 - hypothetical protein 502 66.74 0 577127..578539 - 470 91974984 - RPD_0504 - isopropylmalate isomerase large subunit 503 67.04 0 578747..579016 - 89 91974985 - RPD_0505 - hypothetical protein 504 63.13 0 579034..579429 - 131 91974986 rplS RPD_0506 - 50S ribosomal protein L19 505 69.84 +1 579543..580361 - 272 91974987 - RPD_0507 - tRNA (guanine-N1)-methyltransferase 506 70.24 +1 580553..581083 - 176 91974988 - RPD_0508 - 16S rRNA processing protein RimM 507 67.59 0 581096..581419 - 107 91974989 rpsP RPD_0509 - 30S ribosomal protein S16 508 68.02 0 581581..583134 - 517 91974990 - RPD_0510 - signal recognition particle protein 509 66.67 0 583492..584466 + 324 91974991 - RPD_0511 - beta-lactamase-like 510 68.87 +1 584490..585215 - 241 91974992 - RPD_0512 - hypothetical protein 511 64.68 0 585212..586018 - 268 91974993 - RPD_0513 - transcription activator, effector binding 512 67.23 0 586253..587134 + 293 91974994 dapF RPD_0514 - diaminopimelate epimerase 513 67.57 0 587134..588465 + 443 91974995 - RPD_0515 - MiaB-like tRNA modifying enzyme 514 68.90 +1 588401..589297 - 298 91974996 - RPD_0516 - pseudouridine synthase 515 66.24 0 589326..590273 + 315 91974997 - RPD_0517 - signal recognition particle-docking protein FtsY 516 62.56 0 590270..590902 + 210 91974998 - RPD_0518 - intracellular septation protein A 517 64.63 0 591159..591551 - 130 91974999 - RPD_0519 - hypothetical protein 518 67.33 0 591670..592269 - 199 91975000 - RPD_0520 - periplasmic protein thiol 519 66.11 0 592266..592445 - 59 91975001 - RPD_0521 - Heme exporter protein D (CcmD) 520 69.12 +1 592442..593176 - 244 91975002 - RPD_0522 - heme exporter protein CcmC 521 71.90 +1 593368..594036 - 222 91975003 - RPD_0523 - heme exporter protein CcmB 522 70.81 +1 594086..594688 - 200 91975004 - RPD_0524 - cytochrome c biogenesis protein CcmA 523 64.02 0 594905..597622 + 905 91975005 - RPD_0525 - aconitate hydratase 524 66.55 0 597793..598629 + 278 91975006 - RPD_0526 - hypothetical protein 525 66.94 0 598989..599357 + 122 91975007 - RPD_0527 - hypothetical protein 526 68.50 +1 599552..600097 - 181 91975008 - RPD_0528 - GCN5-related N-acetyltransferase 527 64.02 0 600372..601163 - 263 91975009 - RPD_0529 - hypothetical protein 528 69.36 +1 601496..604090 - 864 91975010 - RPD_0530 - hypothetical protein 529 69.37 +1 604094..604834 - 246 91975011 - RPD_0531 - ABC transporter related 530 66.51 0 604899..605534 + 211 91975012 - RPD_0532 - lipolytic enzyme, G-D-S-L 531 66.11 0 605725..606261 + 178 91975013 - RPD_0533 - 2',5' RNA ligase 532 65.91 0 606344..607525 + 393 91975014 - RPD_0534 - AFG1-like ATPase 533 64.81 0 607655..608623 + 322 91975015 - RPD_0535 - malate dehydrogenase 534 62.42 0 608713..609912 + 399 91975016 sucC RPD_0536 - succinyl-CoA synthetase subunit beta 535 55.98 -2 609963..610196 + 77 91975017 - RPD_0537 - CopG-like DNA-binding 536 61.43 -1 610186..610605 + 139 91975018 - RPD_0538 - PilT protein-like 537 66.55 0 610618..611502 + 294 91975019 - RPD_0539 - succinyl-CoA synthetase, alpha subunit 538 65.50 0 611893..612579 + 228 91975020 - RPD_0540 - GCN5-related N-acetyltransferase 539 60.42 -1 612634..613737 - 367 91975021 - RPD_0541 - hypothetical protein 540 65.69 0 613913..614425 + 170 91975022 - RPD_0542 - regulatory protein, MarR 541 63.24 0 614527..615342 + 271 91975023 - RPD_0543 - hypothetical protein 542 64.84 0 615785..618742 + 985 91975024 kgd RPD_0544 - alpha-ketoglutarate decarboxylase 543 67.13 0 618849..620150 + 433 91975025 - RPD_0545 - dihydrolipoamide acetyltransferase 544 68.91 +1 620210..620611 + 133 91975026 - RPD_0546 - hypothetical protein 545 68.41 0 620619..621365 + 248 91975027 - RPD_0547 - short-chain dehydrogenase/reductase SDR 546 63.14 0 621392..621646 + 84 91975028 - RPD_0548 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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