version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 397 67.51 0 466232..467185 + 317 91974879 - RPD_0399 - hypothetical protein 398 69.95 +1 467172..467567 + 131 91974880 - RPD_0400 - hypothetical protein 399 64.01 0 467651..468592 + 313 91974881 - RPD_0401 - glutathione synthetase 400 64.20 0 468696..469424 + 242 91974882 - RPD_0402 - regulatory protein, LuxR 401 64.23 0 469502..470158 + 218 91974883 - RPD_0403 - autoinducer (acylhomoserine lactone) synthase 402 61.33 -1 470155..470379 + 74 91974884 - RPD_0404 - hypothetical protein 403 70.70 +1 470489..472027 + 512 91974885 - RPD_0405 - Mg chelatase-related protein 404 66.87 0 472132..472617 + 161 91974886 - RPD_0406 - hypothetical protein 405 66.82 0 472732..474684 + 650 91974887 - RPD_0407 - ATP-binding region, ATPase-like 406 66.27 0 474891..475904 + 337 91974888 - RPD_0408 - hypothetical protein 407 64.05 0 476038..476994 - 318 91974889 - RPD_0409 - pantothenate kinase 408 65.74 0 477185..477508 - 107 91974890 hisE RPD_0410 - phosphoribosyl-ATP pyrophosphatase 409 65.62 0 477564..478331 - 255 91974891 - RPD_0411 - imidazole glycerol phosphate synthase subunit HisF 410 68.43 0 478339..479076 - 245 91974892 - RPD_0412 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 411 65.59 0 479255..479905 - 216 91974893 hisH RPD_0413 - imidazole glycerol phosphate synthase subunit HisH 412 68.98 +1 479902..480420 - 172 91974894 - RPD_0414 - hypothetical protein 413 63.97 0 480449..481042 - 197 91974895 - RPD_0415 - imidazoleglycerol-phosphate dehydratase 414 65.46 0 481225..481806 + 193 91974896 - RPD_0416 - ATP-dependent protease peptidase subunit 415 65.64 0 481803..482288 + 161 91974897 - RPD_0417 - GCN5-related N-acetyltransferase 416 64.90 0 482285..483586 + 433 91974898 hslU RPD_0418 - ATP-dependent protease ATP-binding subunit 417 69.35 +1 483691..484287 - 198 91974899 - RPD_0419 - Smr protein/MutS2 418 66.67 0 484290..485768 - 492 91974900 - RPD_0420 - MltA 419 62.01 0 485824..486531 - 235 91974901 - RPD_0421 - import inner membrane translocase, subunit Tim44 420 63.52 0 486979..487455 + 158 91974902 - RPD_0422 - preprotein translocase subunit SecB 421 65.95 0 487508..488203 - 231 91974903 - RPD_0423 - DNA polymerase III, epsilon subunit 422 66.67 0 488243..488842 - 199 91974904 coaE RPD_0424 - dephospho-CoA kinase 423 64.37 0 488969..489577 - 202 91974905 - RPD_0425 - Maf-like protein 424 62.86 0 489574..490413 - 279 91974906 - RPD_0426 - hypothetical protein 425 57.37 -2 490867..491307 + 146 91974907 - RPD_0427 - hypothetical protein 426 61.69 0 491591..492856 + 421 91974908 rho RPD_0428 - transcription termination factor Rho 427 68.68 +1 492960..494348 + 462 91974909 trmE RPD_0429 - tRNA modification GTPase TrmE 428 67.84 0 494578..496458 + 626 91974910 - RPD_0430 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 429 62.39 0 497049..497750 + 233 91974911 - RPD_0431 - methyltransferase GidB 430 63.86 0 497747..498601 + 284 91974912 - RPD_0432 - cobyrinic acid a,c-diamide synthase 431 68.80 +1 498870..499760 + 296 91974913 - RPD_0433 - parB-like partition proteins 432 69.78 +1 500113..501141 - 342 91974914 holA RPD_0434 - DNA polymerase III subunit delta 433 67.56 0 501189..501749 - 186 91974915 - RPD_0435 - hypothetical protein 434 65.64 0 501736..504372 - 878 91974916 leuS RPD_0436 - leucyl-tRNA synthetase 435 66.49 0 504585..506261 - 558 91974917 - RPD_0437 - GGDEF domain-containing protein 436 67.57 0 506433..507098 + 221 91974918 - RPD_0438 - hypothetical protein 437 68.60 +1 507145..507714 - 189 91974919 - RPD_0439 - hypothetical protein 438 63.76 0 507883..508569 + 228 91974920 - RPD_0440 - winged helix family two component transcriptional regulator 439 68.01 0 508696..509142 + 148 91974921 - RPD_0441 - cyclic nucleotide-binding 440 63.64 0 509393..510451 - 352 91974922 - RPD_0442 - exodeoxyribonuclease III 441 66.77 0 510508..511455 - 315 91974923 - RPD_0443 - outer membrane lipoprotein carrier protein LolA 442 67.39 0 511473..513944 - 823 91974924 - RPD_0444 - cell divisionFtsK/SpoIIIE 443 68.68 +1 513953..515191 - 412 91974925 - RPD_0445 - aminotransferase, class I and II 444 62.22 0 515319..515588 + 89 91974926 - RPD_0446 - transcriptional regulator AbrB 445 57.11 -2 515593..516000 + 135 91974927 - RPD_0447 - PilT protein-like 446 67.50 0 516232..517674 - 480 91974928 - RPD_0448 - ammonium transporter 447 60.47 -1 517715..518053 - 112 91974929 - RPD_0449 - nitrogen regulatory protein P-II 448 64.76 0 518377..518691 - 104 91974930 - RPD_0450 - hypothetical protein 449 64.60 0 519000..519338 - 112 91974931 - RPD_0451 - nitrogen regulatory protein P-II 450 65.08 0 519615..520496 - 293 91974932 - RPD_0452 - acyl-CoA thioesterase II 451 69.24 +1 520635..521954 + 439 91974933 - RPD_0453 - 2-octaprenyl-6-methoxyphenyl hydroxylase 452 66.16 0 522175..522372 - 65 91974934 - RPD_0454 - hypothetical protein 453 63.85 0 522466..523140 - 224 91974935 - RPD_0455 - peptidase S16, lon-like 454 68.19 0 523270..524190 - 306 91974936 - RPD_0456 - thioredoxin 455 68.05 0 524645..525583 - 312 91974937 - RPD_0457 - LysR, substrate-binding 456 67.33 0 525665..526414 + 249 91974938 - RPD_0458 - hypothetical protein 457 64.88 0 526524..527306 - 260 91974939 - RPD_0459 - histidine kinase, HAMP region 458 66.67 0 528003..528995 + 330 91974940 - RPD_0460 - AppA/PpaA family photosynthesis gene regulator 459 69.24 +1 529350..530435 + 361 91974941 - RPD_0461 - hypothetical protein 460 67.67 0 530582..531880 - 432 91974942 - RPD_0462 - ribulose-bisphosphate carboxylase 461 65.03 0 532026..532454 - 142 91974943 - RPD_0463 - hypothetical protein 462 68.13 0 532736..534718 + 660 91974944 - RPD_0464 - acyltransferase 3 463 63.95 0 534811..535989 - 392 91974945 - RPD_0465 - alginate o-acetyltransferase AlgJ 464 65.32 0 535992..537404 - 470 91974946 - RPD_0466 - membrane bound O-acyl transferase, MBOAT 465 71.48 +1 537900..539666 - 588 91974947 - RPD_0467 - HemY-like 466 71.88 +1 539674..541113 - 479 91974948 - RPD_0468 - hypothetical protein 467 68.28 0 541174..541917 - 247 91974949 - RPD_0469 - uroporphyrinogen III synthase HEM4 468 69.57 +1 542016..543185 + 389 91974950 - RPD_0470 - O-sialoglycoprotein endopeptidase 469 70.30 +1 543222..544211 + 329 91974951 gpsA RPD_0471 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 470 62.32 0 544215..544628 + 137 91974952 - RPD_0472 - hypothetical protein 471 68.73 +1 544799..545476 + 225 91974953 - RPD_0473 - hypothetical protein 472 65.69 0 545958..547910 + 650 91974954 - RPD_0474 - acetyl-CoA synthetase 473 66.48 0 548292..548819 + 175 91974955 - RPD_0475 - ErfK/YbiS/YcfS/YnhG 474 74.83 +2 548928..551021 - 697 91974956 - RPD_0476 - OmpA/MotB 475 61.55 0 551564..552052 - 162 91974957 - RPD_0477 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 476 63.09 0 552188..552970 - 260 91974958 sdhB RPD_0478 - succinate dehydrogenase iron-sulfur subunit 477 67.00 0 553099..554922 - 607 91974959 sdhA RPD_0479 - succinate dehydrogenase flavoprotein subunit 478 63.59 0 554926..555348 - 140 91974960 - RPD_0480 - succinate dehydrogenase, cytochrome b subunit 479 62.05 0 555345..555734 - 129 91974961 - RPD_0481 - succinate dehydrogenase, cytochrome b subunit 480 65.50 0 555966..557084 + 372 91974962 - RPD_0482 - cation diffusion facilitator family transporter 481 66.53 0 557384..558895 - 503 91974963 - RPD_0483 - malonyl-CoA synthase 482 67.33 0 558984..559733 + 249 91974964 - RPD_0484 - short-chain dehydrogenase/reductase SDR 483 64.27 0 560248..560832 + 194 91974965 - RPD_0485 - beta-Ig-H3/fasciclin 484 62.33 0 561057..561701 + 214 91974966 - RPD_0486 - hypothetical protein 485 62.31 0 561704..562483 + 259 91974967 - RPD_0487 - twin-arginine translocation pathway signal 486 66.09 0 562633..563151 + 172 91974968 - RPD_0488 - superoxide dismutase, copper/zinc binding 487 68.86 +1 563283..564467 - 394 91974969 - RPD_0489 - major facilitator transporter 488 66.22 0 564693..565805 + 370 91974970 - RPD_0490 - 3-isopropylmalate dehydrogenase 489 68.24 0 565977..566357 - 126 91974971 - RPD_0491 - hypothetical protein 490 71.79 +1 566522..567340 - 272 91974972 - RPD_0492 - hypothetical protein 491 62.51 0 567499..568533 + 344 91974973 - RPD_0493 - aspartate-semialdehyde dehydrogenase 492 62.08 0 568675..569241 + 188 91974974 - RPD_0494 - hypothetical protein 493 64.65 0 569490..570134 - 214 91974975 - RPD_0495 - carbonate dehydratase 494 67.92 0 570335..571213 + 292 91974976 - RPD_0496 - Citryl-CoA lyase 495 64.65 0 571384..573117 - 577 91974977 - RPD_0497 - chemotaxis sensory transducer 496 61.22 -1 573397..574002 - 201 91974978 leuD RPD_0498 - isopropylmalate isomerase small subunit 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0