version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4204 68.70 +1 4694026..4695303 + 425 91978686 - RPD_4227 - major facilitator transporter 4205 68.59 +1 4695402..4697009 + 535 91978687 - RPD_4228 - twin-arginine translocation pathway signal 4206 67.06 0 4697380..4698387 + 335 91978688 - RPD_4229 - twin-arginine translocation pathway signal 4207 67.00 0 4698651..4699868 + 405 91978689 - RPD_4230 - putative cylclic diguanylate phosphodiesterase 4208 63.39 0 4700003..4700704 - 233 91978690 - RPD_4231 - hypothetical protein 4209 63.73 0 4700832..4701137 + 101 91978691 - RPD_4232 - hypothetical protein 4210 67.57 0 4701164..4702384 - 406 91978692 - RPD_4233 - hypothetical protein 4211 70.18 +1 4702474..4703100 - 208 91978693 - RPD_4234 - NUDIX hydrolase 4212 66.43 0 4703176..4703595 + 139 91978694 - RPD_4235 - thioesterase superfamily protein 4213 67.38 0 4703609..4704874 - 421 91978695 - RPD_4236 - hypothetical protein 4214 68.54 +1 4704959..4705705 - 248 91978696 - RPD_4237 - HAD family hydrolase 4215 63.97 0 4706117..4707376 - 419 91978697 - RPD_4238 - adenosylmethionine--8-amino-7-oxononanoate transaminase 4216 67.45 0 4707376..4708014 - 212 91978698 bioD RPD_4239 - dithiobiotin synthetase 4217 68.46 +1 4708011..4709237 - 408 91978699 - RPD_4240 - 8-amino-7-oxononanoate synthase 4218 60.30 -1 4709400..4709933 + 177 91978700 - RPD_4241 - hypothetical protein 4219 67.96 0 4709984..4711375 - 463 91978701 - RPD_4242 - ATP-binding region, ATPase-like 4220 68.18 0 4711372..4712031 - 219 91978702 - RPD_4243 - response regulator receiver 4221 69.50 +1 4712135..4713937 + 600 91978703 - RPD_4244 - protein-disulfide reductase 4222 63.35 0 4713964..4714596 + 210 91978704 - RPD_4245 - DSBA oxidoreductase 4223 65.33 0 4714602..4715276 + 224 91978705 - RPD_4246 - ErfK/YbiS/YcfS/YnhG 4224 67.33 0 4715292..4716650 - 452 91978706 - RPD_4247 - twin-arginine translocation pathway signal 4225 63.34 0 4716619..4717881 - 420 91978707 - RPD_4248 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 4226 66.22 0 4717878..4718324 - 148 91978708 - RPD_4249 - putative cytochrome subunit of sulfide dehydrogenase 4227 67.03 0 4718369..4719460 - 363 91978709 - RPD_4250 - protein of unknown function DUF395, YeeE/YedE 4228 64.75 0 4719644..4720372 - 242 91978710 - RPD_4251 - putative cytochrome 4229 64.95 0 4720356..4721633 - 425 91978711 - RPD_4252 - twin-arginine translocation pathway signal 4230 64.43 0 4721690..4723387 - 565 91978712 - RPD_4253 - twin-arginine translocation pathway signal 4231 59.70 -1 4723533..4723862 - 109 91978713 - RPD_4254 - putative sulfur oxidation protein SoxZ 4232 61.72 0 4723904..4724368 - 154 91978714 - RPD_4255 - sulfur oxidation protein SoxY 4233 64.22 0 4724545..4725363 + 272 91978715 - RPD_4256 - hypothetical protein 4234 61.87 0 4725377..4726147 + 256 91978716 - RPD_4257 - hypothetical protein 4235 68.24 0 4726175..4726681 + 168 91978717 - RPD_4258 - hypothetical protein 4236 62.77 0 4726820..4727410 - 196 91978718 - RPD_4259 - hypothetical protein 4237 63.98 0 4727434..4728177 - 247 91978719 - RPD_4260 - cytochrome c biogenesis protein, transmembrane region 4238 62.04 0 4728218..4728649 + 143 91978720 - RPD_4261 - hypothetical protein 4239 61.90 0 4728655..4729032 + 125 91978721 - RPD_4262 - ArsR family transcriptional regulator 4240 67.66 0 4729102..4730304 + 400 91978722 - RPD_4263 - protein of unknown function DUF395, YeeE/YedE 4241 61.15 -1 4730219..4730671 - 150 91978723 - RPD_4264 - hypothetical protein 4242 65.87 0 4731063..4731563 + 166 91978724 - RPD_4265 - hypothetical protein 4243 69.73 +1 4731628..4731921 + 97 91978725 - RPD_4266 - hypothetical protein 4244 65.64 0 4731930..4733396 + 488 91978726 - RPD_4267 - copper tolerance protein 4245 62.61 0 4733410..4734789 + 459 91978727 - RPD_4268 - twin-arginine translocation pathway signal 4246 60.70 -1 4734840..4735325 + 161 91978728 - RPD_4269 - blue (type1) copper domain-containing protein 4247 59.67 -1 4735348..4735647 + 99 91978729 - RPD_4270 - hypothetical protein 4248 60.70 -1 4735773..4736141 + 122 91978730 - RPD_4271 - copper resistance protein CopC 4249 66.02 0 4736141..4737073 + 310 91978731 - RPD_4272 - copper resistance D 4250 60.49 -1 4737121..4737363 - 80 91978732 - RPD_4273 - hypothetical protein 4251 65.88 0 4737622..4738254 - 210 91978733 - RPD_4274 - hypothetical protein 4252 63.04 0 4738251..4738802 - 183 91978734 - RPD_4275 - RNA polymerase sigma factor 4253 67.79 0 4739792..4740415 - 207 91978735 - RPD_4276 - Maf-like protein 4254 63.56 0 4740774..4741223 - 149 91978736 - RPD_4277 - protein tyrosine phosphatase 4255 62.80 0 4741352..4741843 - 163 91978737 - RPD_4278 - hypothetical protein 4256 68.48 +1 4741840..4743165 - 441 91978738 hisD RPD_4279 - histidinol dehydrogenase 4257 65.32 0 4743273..4743719 - 148 91978739 - RPD_4280 - hypothetical protein 4258 66.51 0 4743740..4745029 - 429 91978740 - RPD_4281 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4259 64.60 0 4745198..4745488 - 96 91978741 - RPD_4282 - hypothetical protein 4260 66.67 0 4745740..4746033 + 97 91978742 - RPD_4283 - hypothetical protein 4261 62.45 0 4746265..4746525 - 86 91978743 - RPD_4284 - hypothetical protein 4262 61.74 0 4746543..4746989 + 148 91978744 - RPD_4285 - hypothetical protein 4263 66.10 0 4747345..4748745 - 466 91978745 - RPD_4286 - amidase 4264 64.83 0 4748831..4749592 - 253 91978746 - RPD_4287 - short-chain dehydrogenase/reductase SDR 4265 63.36 0 4749678..4750403 - 241 91978747 - RPD_4288 - ABC transporter related 4266 64.44 0 4750393..4751112 - 239 91978748 - RPD_4289 - ABC transporter related 4267 64.25 0 4751116..4752189 - 357 91978749 - RPD_4290 - inner-membrane translocator 4268 63.44 0 4752202..4753068 - 288 91978750 - RPD_4291 - inner-membrane translocator 4269 61.99 0 4753184..4754422 - 412 91978751 - RPD_4292 - putative urea/short-chain amide transport system substrate-binding protein 4270 63.36 0 4754452..4755450 - 332 91978752 - RPD_4293 - acetamidase/formamidase 4271 66.74 0 4755467..4756867 - 466 91978753 - RPD_4294 - amidase 4272 61.18 -1 4757280..4758446 + 388 91978754 - RPD_4295 - putative aliphatic amidase expression-regulating protein, AmiC 4273 65.47 0 4758443..4759027 + 194 91978755 - RPD_4296 - ANTAR 4274 64.94 0 4759052..4760206 - 384 91978756 - RPD_4297 - ribonuclease BN, putative 4275 67.23 0 4760743..4762524 + 593 91978757 - RPD_4298 - acyl-CoA dehydrogenase-like 4276 65.62 0 4762720..4763481 + 253 91978758 - RPD_4299 - enoyl-CoA hydratase/isomerase 4277 68.02 0 4763521..4766484 - 987 91978759 - RPD_4300 - Outer membrane autotransporter barrel 4278 67.19 0 4766704..4767276 - 190 91978760 - RPD_4301 - hypothetical protein 4279 66.56 0 4767472..4769295 + 607 91978761 - RPD_4302 - 5'-nucleotidase-like 4280 67.31 0 4769506..4770435 + 309 91978762 - RPD_4303 - histone deacetylase superfamily protein 4281 63.89 0 4770504..4770755 + 83 91978763 - RPD_4304 - exodeoxyribonuclease VII small subunit 4282 65.99 0 4771250..4773166 + 638 91978764 - RPD_4305 - 1-deoxy-D-xylulose-5-phosphate synthase 4283 67.37 0 4773346..4773915 + 189 91978765 - RPD_4306 - nucleoside 2-deoxyribosyltransferase 4284 70.31 +1 4773918..4774658 + 246 91978766 - RPD_4307 - hemolysin A 4285 70.77 +1 4774824..4776236 + 470 91978767 - RPD_4308 - MATE efflux family protein 4286 70.06 +1 4776343..4777581 + 412 91978768 - RPD_4309 - RNA methyltransferase 4287 68.13 0 4777733..4778143 - 136 91978769 - RPD_4310 - hypothetical protein 4288 71.17 +1 4778140..4778472 - 110 91978770 - RPD_4311 - hypothetical protein 4289 67.42 0 4778772..4780760 + 662 91978771 - RPD_4312 - transketolase 4290 63.99 0 4780884..4781891 + 335 91978772 - RPD_4313 - glyceraldehyde-3-phosphate dehydrogenase, type I 4291 67.34 0 4782051..4783247 + 398 91978773 pgk RPD_4314 - phosphoglycerate kinase 4292 62.41 0 4783332..4783613 + 93 91978774 - RPD_4315 - hypothetical protein 4293 61.73 0 4783610..4783933 + 107 91978775 - RPD_4316 - PemK-like protein 4294 65.40 0 4784004..4785032 + 342 91978776 - RPD_4317 - fructose-bisphosphate aldolase 4295 73.81 +2 4785038..4785709 + 223 91978777 - RPD_4318 - thiamine monophosphate synthase 4296 67.93 0 4785713..4786816 + 367 91978778 - RPD_4319 - Sel1 4297 67.05 0 4787043..4787831 + 262 91978779 - RPD_4320 - inositol-1(or 4)-monophosphatase 4298 59.88 -1 4788206..4788529 + 107 91978780 - RPD_4321 - hypothetical protein 4299 63.70 0 4788835..4789914 + 359 91978781 - RPD_4322 - radical SAM family protein 4300 66.84 0 4790137..4791258 + 373 91978782 - RPD_4323 - radical SAM family protein 4301 61.29 -1 4791280..4791837 + 185 91978783 - RPD_4324 - hypothetical protein 4302 66.45 0 4792013..4792933 - 306 91978784 - RPD_4325 - peptidase U32 4303 67.79 0 4793083..4794060 - 325 91978785 - RPD_4326 - peptidase U32 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0