version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4114 63.17 0 4603347..4604660 - 437 91978596 - RPD_4135 - protein of unknown function DUF224, cysteine-rich region 4115 70.21 +1 4604657..4605898 - 413 91978597 - RPD_4136 - FAD linked oxidase-like 4116 65.66 0 4605919..4607412 - 497 91978598 - RPD_4137 - D-lactate dehydrogenase (cytochrome) 4117 69.78 +1 4607454..4608128 - 224 91978599 - RPD_4138 - TetR family transcriptional regulator 4118 66.35 0 4608423..4608740 - 105 91978600 - RPD_4139 - branched-chain amino acid transport 4119 66.67 0 4608737..4609474 - 245 91978601 - RPD_4140 - AzlC-like 4120 66.04 0 4609730..4611646 - 638 91978602 - RPD_4141 - ATP-dependent metalloprotease FtsH 4121 69.35 +1 4611860..4612903 - 347 91978603 - RPD_4142 - tRNA(Ile)-lysidine synthetase-like 4122 68.59 +1 4613007..4614044 - 345 91978604 - RPD_4143 - hypothetical protein 4123 65.86 0 4614305..4614802 - 165 91978605 - RPD_4144 - OmpA/MotB 4124 61.92 0 4615145..4615903 - 252 91978606 - RPD_4145 - hypothetical protein 4125 61.44 -1 4616064..4618397 - 777 91978607 - RPD_4146 - GGDEF domain-containing protein 4126 65.85 0 4618605..4619954 - 449 91978608 tolB RPD_4147 - translocation protein TolB 4127 64.62 0 4620012..4620989 - 325 91978609 - RPD_4148 - putative TolA 4128 64.97 0 4621046..4621516 - 156 91978610 - RPD_4149 - biopolymer transport protein ExbD/TolR 4129 62.87 0 4621554..4622237 - 227 91978611 - RPD_4150 - MotA/TolQ/ExbB proton channel 4130 67.28 0 4622568..4622894 - 108 91978612 - RPD_4151 - RNA polymerase ECF-type sigma factor 4131 66.67 0 4622900..4623172 - 90 91978613 - RPD_4152 - alkylhydroperoxidase AhpD core 4132 64.54 0 4623330..4623800 - 156 91978614 - RPD_4153 - hypothetical protein 4133 68.65 +1 4623945..4624649 - 234 91978615 - RPD_4154 - TetR family transcriptional regulator 4134 67.86 0 4624884..4625303 - 139 91978616 - RPD_4155 - hypothetical protein 4135 61.54 0 4625728..4625883 + 51 91978617 - RPD_4156 - hypothetical protein 4136 60.45 -1 4626029..4626205 - 58 91978618 - RPD_4157 - hypothetical protein 4137 68.19 0 4626489..4627277 + 262 91978619 - RPD_4158 - short-chain dehydrogenase/reductase SDR 4138 64.23 0 4627492..4627902 - 136 91978620 - RPD_4159 - glyoxalase/bleomycin resistance protein/dioxygenase 4139 68.97 +1 4627937..4629196 - 419 91978621 - RPD_4160 - sigma-70 region 2 4140 66.40 0 4629193..4629564 - 123 91978622 - RPD_4161 - hypothetical protein 4141 67.37 0 4629718..4630143 - 141 91978623 - RPD_4162 - glyoxalase/bleomycin resistance protein/dioxygenase 4142 63.56 0 4630460..4631716 - 418 91978624 - RPD_4163 - putative OpgC protein, require for succinylation of osmoregulated periplasmic glucans 4143 66.44 0 4632011..4633324 - 437 91978625 - RPD_4164 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 4144 64.29 0 4633413..4633874 - 153 91978626 - RPD_4165 - 4-hydroxybenzoyl-CoA thioesterase 4145 57.73 -2 4634049..4634339 - 96 91978627 - RPD_4166 - plasmid stabilization system protein 4146 68.98 +1 4634688..4635770 - 360 91978628 ruvB RPD_4167 - Holliday junction DNA helicase B 4147 67.60 0 4636008..4636436 - 142 91978629 - RPD_4168 - hypothetical protein 4148 68.28 0 4636433..4637050 - 205 91978630 ruvA RPD_4169 - Holliday junction DNA helicase motor protein 4149 67.24 0 4637208..4637906 - 232 91978631 ruvC RPD_4170 - Holliday junction resolvase 4150 63.99 0 4637966..4638712 - 248 91978632 - RPD_4171 - hypothetical protein 4151 67.46 0 4638903..4640657 + 584 91978633 - RPD_4172 - methyl-accepting chemotaxis sensory transducer 4152 70.49 +1 4643064..4644683 + 539 91978634 - RPD_4175 - hypothetical protein 4153 67.95 0 4644673..4645920 + 415 91978635 - RPD_4176 - hypothetical protein 4154 69.76 +1 4645926..4647380 + 484 91978636 - RPD_4177 - pyridoxal-dependent decarboxylase 4155 64.82 0 4647488..4648462 + 324 91978637 - RPD_4178 - hypothetical protein 4156 67.27 0 4648581..4649405 - 274 91978638 - RPD_4179 - hypothetical protein 4157 70.75 +1 4649408..4649995 - 195 91978639 - RPD_4180 - 5-formyltetrahydrofolate cyclo-ligase 4158 69.72 +1 4650416..4650874 + 152 91978640 - RPD_4181 - hypothetical protein 4159 59.52 -1 4650983..4651318 - 111 91978641 - RPD_4182 - transcriptional regulator 4160 60.98 -1 4651296..4651682 - 128 91978642 - RPD_4183 - hypothetical protein 4161 63.42 0 4652069..4652623 + 184 91978643 - RPD_4184 - hypothetical protein 4162 66.67 0 4652783..4653175 - 130 91978644 - RPD_4185 - rhodanese-like protein 4163 69.18 +1 4653199..4653675 - 158 91978645 - RPD_4186 - isoprenylcysteine carboxyl methyltransferase 4164 68.63 +1 4653769..4654074 - 101 91978646 - RPD_4187 - hypothetical protein 4165 66.99 0 4654071..4657151 - 1026 91978647 - RPD_4188 - heavy metal efflux pump CzcA 4166 67.21 0 4657152..4658450 - 432 91978648 - RPD_4189 - secretion protein HlyD 4167 63.67 0 4658463..4658729 + 88 91978649 - RPD_4190 - hypothetical protein 4168 65.52 0 4658870..4659217 - 115 91978650 - RPD_4191 - cytochrome b5 4169 66.11 0 4659232..4660497 - 421 91978651 - RPD_4192 - ferric reductase-like transmembrane component-like 4170 63.03 0 4660502..4660831 - 109 91978652 - RPD_4193 - hypothetical protein 4171 60.70 -1 4661081..4662103 - 340 91978653 - RPD_4194 - cysteine synthase 4172 62.72 0 4662113..4663099 - 328 91978654 - RPD_4195 - hypothetical protein 4173 65.65 0 4663103..4663984 - 293 91978655 - RPD_4196 - hypothetical protein 4174 67.29 0 4664090..4665049 + 319 91978656 - RPD_4197 - LysR, substrate-binding 4175 64.42 0 4665093..4665803 - 236 91978657 - RPD_4198 - DSBA oxidoreductase 4176 67.44 0 4665800..4669027 - 1075 91978658 - RPD_4199 - acriflavin resistance protein 4177 69.26 +1 4669024..4670025 - 333 91978659 - RPD_4200 - secretion protein HlyD 4178 65.42 0 4670027..4670347 - 106 91978660 - RPD_4201 - regulatory protein, ArsR 4179 61.27 -1 4670456..4670659 + 67 91978661 - RPD_4202 - hypothetical protein 4180 67.35 0 4670854..4671294 - 146 91978662 - RPD_4203 - nitrogen fixation-related protein 4181 65.17 0 4671412..4671945 - 177 91978663 - RPD_4204 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 4182 68.18 0 4672028..4672621 - 197 91978664 - RPD_4205 - transcriptional regulator PadR-like 4183 65.17 0 4673023..4673223 + 66 91978665 - RPD_4206 - hypothetical protein 4184 64.71 0 4673310..4674077 - 255 91978666 - RPD_4207 - hypothetical protein 4185 63.41 0 4674385..4674936 + 183 91978667 - RPD_4208 - hypothetical protein 4186 65.83 0 4675090..4676283 + 397 91978668 - RPD_4209 - peptidase M48, Ste24p 4187 61.50 -1 4676457..4677230 + 257 91978669 - RPD_4210 - hypothetical protein 4188 63.73 0 4677384..4678097 + 237 91978670 - RPD_4211 - hypothetical protein 4189 66.30 0 4678267..4678812 - 181 91978671 - RPD_4212 - adenine phosphoribosyltransferase 4190 67.41 0 4678953..4681115 - 720 91978672 - RPD_4213 - anthranilate synthase 4191 66.18 0 4681439..4681645 + 68 91978673 - RPD_4214 - hypothetical protein 4192 69.06 +1 4681667..4682293 - 208 91978674 - RPD_4215 - methyltransferase type 12 4193 68.09 0 4682317..4683726 - 469 91978675 - RPD_4216 - hypothetical protein 4194 67.23 0 4684132..4684308 + 58 91978676 - RPD_4217 - hypothetical protein 4195 60.27 -1 4684438..4684656 - 72 91978677 - RPD_4218 - PhnA protein 4196 64.35 0 4684794..4685483 - 229 91978678 - RPD_4219 - OmpW 4197 68.97 +1 4685704..4685964 - 86 91978679 - RPD_4220 - hypothetical protein 4198 66.41 0 4686158..4688068 - 636 91978680 - RPD_4221 - AMP-dependent synthetase and ligase 4199 69.15 +1 4688242..4689006 - 254 91978681 - RPD_4222 - tetratricopeptide TPR_2 4200 66.29 0 4689160..4689963 - 267 91978682 - RPD_4223 - short-chain dehydrogenase/reductase SDR 4201 70.67 +1 4690277..4690651 - 124 91978683 - RPD_4224 - hypothetical protein 4202 66.15 0 4690648..4692768 - 706 91978684 - RPD_4225 - TRAP transporter, 4TM/12TM fusion protein 4203 62.37 0 4692917..4693870 - 317 91978685 - RPD_4226 - TRAP transporter solute receptor TAXI family protein 4204 68.70 +1 4694026..4695303 + 425 91978686 - RPD_4227 - major facilitator transporter 4205 68.59 +1 4695402..4697009 + 535 91978687 - RPD_4228 - twin-arginine translocation pathway signal 4206 67.06 0 4697380..4698387 + 335 91978688 - RPD_4229 - twin-arginine translocation pathway signal 4207 67.00 0 4698651..4699868 + 405 91978689 - RPD_4230 - putative cylclic diguanylate phosphodiesterase 4208 63.39 0 4700003..4700704 - 233 91978690 - RPD_4231 - hypothetical protein 4209 63.73 0 4700832..4701137 + 101 91978691 - RPD_4232 - hypothetical protein 4210 67.57 0 4701164..4702384 - 406 91978692 - RPD_4233 - hypothetical protein 4211 70.18 +1 4702474..4703100 - 208 91978693 - RPD_4234 - NUDIX hydrolase 4212 66.43 0 4703176..4703595 + 139 91978694 - RPD_4235 - thioesterase superfamily protein 4213 67.38 0 4703609..4704874 - 421 91978695 - RPD_4236 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0