version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4041 63.57 0 4513704..4515092 + 462 91978523 - RPD_4062 - NADH:flavin oxidoreductase/NADH oxidase 4042 63.06 0 4515295..4517094 - 599 91978524 - RPD_4063 - extracellular solute-binding protein 4043 63.57 0 4517164..4517550 - 128 91978525 - RPD_4064 - hypothetical protein 4044 61.21 -1 4517558..4518364 - 268 91978526 - RPD_4065 - binding-protein-dependent transport systems inner membrane component 4045 62.46 0 4518364..4519266 - 300 91978527 - RPD_4066 - binding-protein-dependent transport systems inner membrane component 4046 65.76 0 4519266..4520369 - 367 91978528 - RPD_4067 - ABC transporter related 4047 67.31 0 4520382..4521461 - 359 91978529 - RPD_4068 - ABC transporter related 4048 65.89 0 4521458..4522999 - 513 91978530 glpD RPD_4069 - glycerol-3-phosphate dehydrogenase 4049 65.29 0 4523269..4524069 - 266 91978531 - RPD_4070 - DeoR family transcriptional regulator 4050 62.14 0 4524169..4524786 - 205 91978532 - RPD_4071 - hypothetical protein 4051 62.60 0 4524803..4525417 - 204 91978533 - RPD_4072 - TetR family transcriptional regulator 4052 64.98 0 4525436..4528576 - 1046 91978534 - RPD_4073 - acriflavin resistance protein 4053 66.31 0 4528593..4529699 - 368 91978535 - RPD_4074 - secretion protein HlyD 4054 63.11 0 4529865..4530089 - 74 91978536 - RPD_4075 - 3-demethylubiquinone-9 3-methyltransferase 4055 63.55 0 4530132..4532762 - 876 91978537 - RPD_4076 - multi-sensor hybrid histidine kinase 4056 63.89 0 4533259..4533474 + 71 91978538 - RPD_4077 - CsbD-like 4057 65.24 0 4533568..4534551 - 327 91978539 - RPD_4078 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 4058 66.41 0 4534672..4536258 - 528 91978540 - RPD_4079 - gamma-glutamyltransferase 4059 61.57 0 4536471..4536686 + 71 91978541 - RPD_4080 - SlyX 4060 65.76 0 4536848..4538386 - 512 91978542 - RPD_4081 - AMP-dependent synthetase and ligase 4061 58.07 -1 4538705..4539367 - 220 91978543 - RPD_4082 - cyclic nucleotide-binding 4062 63.77 0 4539607..4540020 - 137 91978544 - RPD_4083 - hypothetical protein 4063 63.84 0 4540152..4541000 + 282 91978545 - RPD_4084 - beta-lactamase-like 4064 64.77 0 4541110..4541952 + 280 91978546 - RPD_4085 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4065 62.14 0 4542034..4542651 + 205 91978547 - RPD_4086 - glutathione S-transferase-like 4066 68.88 +1 4542716..4543258 - 180 91978548 - RPD_4087 - methylated-DNA--protein-cysteine methyltransferase 4067 68.65 +1 4543323..4544432 - 369 91978549 - RPD_4088 - glycosyl transferase, group 1 4068 68.58 +1 4544791..4546098 + 435 91978550 - RPD_4089 - dihydrodipicolinate reductase 4069 63.06 0 4546187..4546768 - 193 91978551 - RPD_4090 - hypothetical protein 4070 62.86 0 4552807..4553331 + 174 91978552 - RPD_4091 - hypothetical protein 4071 67.11 0 4553328..4555373 + 681 91978553 - RPD_4092 - peptidase M23B 4072 63.89 0 4555635..4556498 - 287 91978554 - RPD_4093 - hypothetical protein 4073 59.92 -1 4556743..4556994 + 83 91978555 - RPD_4094 - hypothetical protein 4074 65.91 0 4557064..4559703 - 879 91978556 - RPD_4095 - ATPase AAA-2 4075 67.24 0 4559843..4560712 + 289 91978557 - RPD_4096 - hypothetical protein 4076 68.30 0 4560878..4561672 - 264 91978558 - RPD_4097 - hypothetical protein 4077 63.92 0 4561887..4562579 - 230 91978559 - RPD_4098 - methionine biosynthesis MetW 4078 66.25 0 4562581..4563780 - 399 91978560 metX RPD_4099 - homoserine O-acetyltransferase 4079 68.90 +1 4564272..4565120 + 282 91978561 - RPD_4100 - hypothetical protein 4080 65.66 0 4565160..4566257 + 365 91978562 - RPD_4101 - histidinol-phosphate aminotransferase 4081 67.41 0 4566254..4567198 + 314 91978563 - RPD_4102 - cyclohexadienyl dehydrogenase 4082 65.01 0 4567326..4568231 - 301 91978564 - RPD_4103 - alpha/beta hydrolase fold 4083 68.15 0 4568470..4569753 - 427 91978565 - RPD_4104 - phosphoribosylamine--glycine ligase 4084 69.71 +1 4569989..4571599 + 536 91978566 xseA RPD_4105 - exodeoxyribonuclease VII large subunit 4085 71.38 +1 4571677..4572504 - 275 91978567 - RPD_4106 - dienelactone hydrolase 4086 61.84 0 4572696..4572923 + 75 91978568 - RPD_4107 - hypothetical protein 4087 70.21 +1 4572968..4573984 - 338 91978569 - RPD_4108 - tetraacyldisaccharide 4'-kinase 4088 68.89 +1 4573977..4575323 - 448 91978570 - RPD_4109 - three-deoxy-D-manno-octulosonic-acid transferase-like 4089 60.98 -1 4575340..4575585 - 81 91978571 - RPD_4110 - hypothetical protein 4090 65.81 0 4575621..4576436 - 271 91978572 - RPD_4111 - inositol-1(or 4)-monophosphatase 4091 66.88 0 4576423..4577820 - 465 91978573 - RPD_4112 - peptidase U62, modulator of DNA gyrase 4092 64.55 0 4577886..4578641 + 251 91978574 - RPD_4113 - hypothetical protein 4093 66.04 0 4578953..4579903 - 316 91978575 ubiA RPD_4114 - prenyltransferase 4094 66.80 0 4579900..4580634 - 244 91978576 - RPD_4115 - hypothetical protein 4095 68.65 +1 4580822..4581577 + 251 91978577 - RPD_4116 - hypothetical protein 4096 68.31 0 4581817..4582974 + 385 91978578 hisZ RPD_4117 - ATP phosphoribosyltransferase regulatory subunit 4097 68.61 +1 4582971..4583948 + 325 91978579 hisG RPD_4118 - ATP phosphoribosyltransferase 4098 67.15 0 4584044..4585087 + 347 91978580 - RPD_4119 - glycosyl transferase family protein 4099 66.78 0 4585084..4585989 + 301 91978581 - RPD_4120 - YdjC-like protein 4100 69.29 +1 4586088..4586963 + 291 91978582 - RPD_4121 - putative periplasmic ligand-binding sensor protein 4101 66.41 0 4587054..4587845 - 263 91978583 - RPD_4122 - ErfK/YbiS/YcfS/YnhG 4102 62.53 0 4588139..4588912 + 257 91978584 - RPD_4123 - hypothetical protein 4103 69.64 +1 4589038..4590246 - 402 91978585 - RPD_4124 - major facilitator transporter 4104 65.93 0 4590334..4590873 - 179 91978586 - RPD_4125 - hypothetical protein 4105 63.64 0 4591148..4591444 + 98 91978587 groES RPD_4126 - co-chaperonin GroES 4106 66.55 0 4591484..4593136 + 550 91978588 groEL RPD_4127 - chaperonin GroEL 4107 64.40 0 4593295..4594485 + 396 91978589 - RPD_4128 - hypothetical protein 4108 68.98 +1 4594602..4596116 + 504 91978590 - RPD_4129 - FAD dependent oxidoreductase 4109 67.39 0 4596267..4596680 - 137 91978591 - RPD_4130 - hypothetical protein 4110 63.24 0 4596873..4598537 - 554 91978592 - RPD_4131 - L-lactate transport 4111 64.03 0 4598660..4600552 + 630 91978593 - RPD_4132 - ABC transporter-like 4112 60.06 -1 4600815..4601813 - 332 91978594 - RPD_4133 - hypothetical protein 4113 61.99 0 4602271..4603275 - 334 91978595 - RPD_4134 - hypothetical protein 4114 63.17 0 4603347..4604660 - 437 91978596 - RPD_4135 - protein of unknown function DUF224, cysteine-rich region 4115 70.21 +1 4604657..4605898 - 413 91978597 - RPD_4136 - FAD linked oxidase-like 4116 65.66 0 4605919..4607412 - 497 91978598 - RPD_4137 - D-lactate dehydrogenase (cytochrome) 4117 69.78 +1 4607454..4608128 - 224 91978599 - RPD_4138 - TetR family transcriptional regulator 4118 66.35 0 4608423..4608740 - 105 91978600 - RPD_4139 - branched-chain amino acid transport 4119 66.67 0 4608737..4609474 - 245 91978601 - RPD_4140 - AzlC-like 4120 66.04 0 4609730..4611646 - 638 91978602 - RPD_4141 - ATP-dependent metalloprotease FtsH 4121 69.35 +1 4611860..4612903 - 347 91978603 - RPD_4142 - tRNA(Ile)-lysidine synthetase-like 4122 68.59 +1 4613007..4614044 - 345 91978604 - RPD_4143 - hypothetical protein 4123 65.86 0 4614305..4614802 - 165 91978605 - RPD_4144 - OmpA/MotB 4124 61.92 0 4615145..4615903 - 252 91978606 - RPD_4145 - hypothetical protein 4125 61.44 -1 4616064..4618397 - 777 91978607 - RPD_4146 - GGDEF domain-containing protein 4126 65.85 0 4618605..4619954 - 449 91978608 tolB RPD_4147 - translocation protein TolB 4127 64.62 0 4620012..4620989 - 325 91978609 - RPD_4148 - putative TolA 4128 64.97 0 4621046..4621516 - 156 91978610 - RPD_4149 - biopolymer transport protein ExbD/TolR 4129 62.87 0 4621554..4622237 - 227 91978611 - RPD_4150 - MotA/TolQ/ExbB proton channel 4130 67.28 0 4622568..4622894 - 108 91978612 - RPD_4151 - RNA polymerase ECF-type sigma factor 4131 66.67 0 4622900..4623172 - 90 91978613 - RPD_4152 - alkylhydroperoxidase AhpD core 4132 64.54 0 4623330..4623800 - 156 91978614 - RPD_4153 - hypothetical protein 4133 68.65 +1 4623945..4624649 - 234 91978615 - RPD_4154 - TetR family transcriptional regulator 4134 67.86 0 4624884..4625303 - 139 91978616 - RPD_4155 - hypothetical protein 4135 61.54 0 4625728..4625883 + 51 91978617 - RPD_4156 - hypothetical protein 4136 60.45 -1 4626029..4626205 - 58 91978618 - RPD_4157 - hypothetical protein 4137 68.19 0 4626489..4627277 + 262 91978619 - RPD_4158 - short-chain dehydrogenase/reductase SDR 4138 64.23 0 4627492..4627902 - 136 91978620 - RPD_4159 - glyoxalase/bleomycin resistance protein/dioxygenase 4139 68.97 +1 4627937..4629196 - 419 91978621 - RPD_4160 - sigma-70 region 2 4140 66.40 0 4629193..4629564 - 123 91978622 - RPD_4161 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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