version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3974 60.78 -1 4443254..4443406 - 50 91978456 - RPD_3995 - hypothetical protein 3975 66.46 0 4443552..4444034 - 160 91978457 - RPD_3996 - MaoC-like dehydratase 3976 62.61 0 4444157..4444624 - 155 91978458 - RPD_3997 - MaoC-like dehydratase 3977 58.84 -1 4444707..4445000 + 97 91978459 - RPD_3998 - hypothetical protein 3978 64.94 0 4445197..4446294 - 365 91978460 - RPD_3999 - translation-associated GTPase 3979 64.58 0 4446424..4447047 - 207 91978461 - RPD_4000 - peptidyl-tRNA hydrolase 3980 67.38 0 4447066..4447770 - 234 91978462 - RPD_4001 - 50S ribosomal protein L25/general stress protein Ctc 3981 72.47 +2 4447948..4448826 - 292 91978463 - RPD_4002 - TonB-like 3982 67.12 0 4448823..4449260 - 145 91978464 - RPD_4003 - biopolymer transport protein ExbD/TolR 3983 68.66 +1 4449264..4450067 - 267 91978465 - RPD_4004 - MotA/TolQ/ExbB proton channel 3984 65.02 0 4450438..4451286 + 282 91978466 - RPD_4005 - enoyl-CoA hydratase 3985 69.20 +1 4451290..4452432 + 380 91978467 - RPD_4006 - acyl-CoA dehydrogenase-like 3986 66.25 0 4452448..4453644 + 398 91978468 - RPD_4007 - acyl-CoA dehydrogenase-like 3987 66.29 0 4453844..4455178 - 444 91978469 - RPD_4008 - phenylacetate--CoA ligase 3988 67.74 0 4455199..4455756 - 185 91978470 - RPD_4009 - pyruvate ferredoxin/flavodoxin oxidoreductase 3989 66.91 0 4455771..4456601 - 276 91978471 - RPD_4010 - 2-oxoglutarate ferredoxin oxidoreductase subunit beta 3990 68.30 0 4456601..4457761 - 386 91978472 - RPD_4011 - 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 3991 66.56 0 4457758..4458705 - 315 91978473 - RPD_4012 - pyruvate ferredoxin/flavodoxin oxidoreductase 3992 65.68 0 4458702..4460525 - 607 91978474 - RPD_4013 - thiamine pyrophosphate enzyme-like TPP-binding 3993 63.30 0 4460789..4461055 + 88 91978475 - RPD_4014 - hypothetical protein 3994 65.55 0 4461171..4462154 + 327 91978476 - RPD_4015 - CHAD 3995 65.58 0 4462147..4462971 + 274 91978477 - RPD_4016 - hypothetical protein 3996 68.28 0 4462993..4465098 - 701 91978478 - RPD_4017 - adenylyl cyclase class-3/4/guanylyl cyclase 3997 65.62 0 4465177..4465842 - 221 91978479 - RPD_4018 - hypothetical protein 3998 66.08 0 4466095..4467114 - 339 91978480 - RPD_4019 - hypothetical protein 3999 66.21 0 4467156..4468259 - 367 91978481 - RPD_4020 - cyclic nucleotide-binding 4000 67.31 0 4468632..4469255 + 207 91978482 - RPD_4021 - hypothetical protein 4001 63.38 0 4469508..4471118 - 536 91978483 - RPD_4022 - extracellular solute-binding protein 4002 67.11 0 4471424..4472554 + 376 91978484 - RPD_4023 - carboxypeptidase 4003 65.29 0 4472731..4473672 + 313 91978485 - RPD_4024 - binding-protein-dependent transport systems inner membrane component 4004 67.34 0 4473684..4474574 + 296 91978486 - RPD_4025 - binding-protein-dependent transport systems inner membrane component 4005 68.16 0 4474571..4476244 + 557 91978487 - RPD_4026 - ABC transporter related 4006 62.80 0 4476346..4476837 + 163 91978488 - RPD_4027 - peroxiredoxin-like protein 4007 63.58 0 4476977..4477429 - 150 91978489 - RPD_4028 - ribonuclease H 4008 65.24 0 4477435..4478415 - 326 91978490 - RPD_4029 - homoserine kinase 4009 66.36 0 4478502..4479467 - 321 91978491 - RPD_4030 - hydroxymethylbutenyl pyrophosphate reductase 4010 65.68 0 4479726..4480433 + 235 91978492 - RPD_4031 - hypothetical protein 4011 70.29 +1 4480602..4482395 - 597 91978493 mutL RPD_4032 - DNA mismatch repair protein 4012 67.14 0 4482676..4483095 - 139 91978494 - RPD_4033 - hypothetical protein 4013 66.74 0 4483233..4484621 - 462 91978495 - RPD_4034 - peptidase M16-like 4014 67.39 0 4484618..4486003 - 461 91978496 - RPD_4035 - peptidase M16-like 4015 66.25 0 4486158..4486883 - 241 91978497 - RPD_4036 - hypothetical protein 4016 63.45 0 4486973..4487470 - 165 91978498 - RPD_4037 - lipoprotein signal peptidase 4017 64.70 0 4487627..4490632 - 1001 91978499 ileS RPD_4038 - isoleucyl-tRNA synthetase 4018 67.53 0 4490811..4491386 - 191 91978500 - RPD_4039 - maltose O-acetyltransferase 4019 68.63 +1 4491383..4492351 - 322 91978501 - RPD_4040 - riboflavin biosynthesis protein RibF 4020 66.67 0 4492499..4493191 - 230 91978502 - RPD_4041 - ribonuclease T2 4021 64.94 0 4493302..4493763 - 153 91978503 - RPD_4042 - hypothetical protein 4022 63.57 0 4493928..4494218 + 96 91978504 - RPD_4043 - hypothetical protein 4023 63.50 0 4494232..4494768 + 178 91978505 - RPD_4044 - hypothetical protein 4024 69.33 +1 4494931..4495305 + 124 91978506 - RPD_4045 - hypothetical protein 4025 67.72 0 4495439..4497808 + 789 91978507 - RPD_4046 - TonB-dependent receptor 4026 68.79 +1 4497968..4498486 - 172 91978508 - RPD_4047 - GCN5-related N-acetyltransferase 4027 64.50 0 4498564..4500273 - 569 91978509 - RPD_4048 - MscS mechanosensitive ion channel 4028 66.47 0 4500421..4500930 - 169 91978510 - RPD_4049 - NUDIX hydrolase 4029 67.46 0 4501147..4502025 + 292 91978511 - RPD_4050 - metallophosphoesterase 4030 66.31 0 4502035..4502595 - 186 91978512 - RPD_4051 - hypothetical protein 4031 60.48 -1 4502823..4503032 - 69 91978513 - RPD_4052 - hypothetical protein 4032 61.72 0 4503056..4504693 - 545 91978514 - RPD_4053 - isocitrate lyase 4033 66.25 0 4504908..4506350 + 480 91978515 - RPD_4054 - hypothetical protein 4034 67.03 0 4506597..4507985 + 462 91978516 - RPD_4055 - lytic murein transglycosylase 4035 63.63 0 4508065..4509249 + 394 91978517 - RPD_4056 - extracellular ligand-binding receptor 4036 66.67 0 4509393..4510157 + 254 91978518 - RPD_4057 - ABC transporter related 4037 64.45 0 4510303..4511025 + 240 91978519 - RPD_4058 - ABC transporter related 4038 66.17 0 4511022..4512032 + 336 91978520 - RPD_4059 - inner-membrane translocator 4039 67.23 0 4512058..4513125 + 355 91978521 - RPD_4060 - inner-membrane translocator 4040 63.40 0 4513336..4513641 + 101 91978522 - RPD_4061 - hypothetical protein 4041 63.57 0 4513704..4515092 + 462 91978523 - RPD_4062 - NADH:flavin oxidoreductase/NADH oxidase 4042 63.06 0 4515295..4517094 - 599 91978524 - RPD_4063 - extracellular solute-binding protein 4043 63.57 0 4517164..4517550 - 128 91978525 - RPD_4064 - hypothetical protein 4044 61.21 -1 4517558..4518364 - 268 91978526 - RPD_4065 - binding-protein-dependent transport systems inner membrane component 4045 62.46 0 4518364..4519266 - 300 91978527 - RPD_4066 - binding-protein-dependent transport systems inner membrane component 4046 65.76 0 4519266..4520369 - 367 91978528 - RPD_4067 - ABC transporter related 4047 67.31 0 4520382..4521461 - 359 91978529 - RPD_4068 - ABC transporter related 4048 65.89 0 4521458..4522999 - 513 91978530 glpD RPD_4069 - glycerol-3-phosphate dehydrogenase 4049 65.29 0 4523269..4524069 - 266 91978531 - RPD_4070 - DeoR family transcriptional regulator 4050 62.14 0 4524169..4524786 - 205 91978532 - RPD_4071 - hypothetical protein 4051 62.60 0 4524803..4525417 - 204 91978533 - RPD_4072 - TetR family transcriptional regulator 4052 64.98 0 4525436..4528576 - 1046 91978534 - RPD_4073 - acriflavin resistance protein 4053 66.31 0 4528593..4529699 - 368 91978535 - RPD_4074 - secretion protein HlyD 4054 63.11 0 4529865..4530089 - 74 91978536 - RPD_4075 - 3-demethylubiquinone-9 3-methyltransferase 4055 63.55 0 4530132..4532762 - 876 91978537 - RPD_4076 - multi-sensor hybrid histidine kinase 4056 63.89 0 4533259..4533474 + 71 91978538 - RPD_4077 - CsbD-like 4057 65.24 0 4533568..4534551 - 327 91978539 - RPD_4078 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 4058 66.41 0 4534672..4536258 - 528 91978540 - RPD_4079 - gamma-glutamyltransferase 4059 61.57 0 4536471..4536686 + 71 91978541 - RPD_4080 - SlyX 4060 65.76 0 4536848..4538386 - 512 91978542 - RPD_4081 - AMP-dependent synthetase and ligase 4061 58.07 -1 4538705..4539367 - 220 91978543 - RPD_4082 - cyclic nucleotide-binding 4062 63.77 0 4539607..4540020 - 137 91978544 - RPD_4083 - hypothetical protein 4063 63.84 0 4540152..4541000 + 282 91978545 - RPD_4084 - beta-lactamase-like 4064 64.77 0 4541110..4541952 + 280 91978546 - RPD_4085 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4065 62.14 0 4542034..4542651 + 205 91978547 - RPD_4086 - glutathione S-transferase-like 4066 68.88 +1 4542716..4543258 - 180 91978548 - RPD_4087 - methylated-DNA--protein-cysteine methyltransferase 4067 68.65 +1 4543323..4544432 - 369 91978549 - RPD_4088 - glycosyl transferase, group 1 4068 68.58 +1 4544791..4546098 + 435 91978550 - RPD_4089 - dihydrodipicolinate reductase 4069 63.06 0 4546187..4546768 - 193 91978551 - RPD_4090 - hypothetical protein 4070 62.86 0 4552807..4553331 + 174 91978552 - RPD_4091 - hypothetical protein 4071 67.11 0 4553328..4555373 + 681 91978553 - RPD_4092 - peptidase M23B 4072 63.89 0 4555635..4556498 - 287 91978554 - RPD_4093 - hypothetical protein 4073 59.92 -1 4556743..4556994 + 83 91978555 - RPD_4094 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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