version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3870 64.07 0 4326756..4327640 - 294 91978352 - RPD_3889 - hypothetical protein 3871 58.33 -1 4327905..4328060 + 51 91978353 - RPD_3890 - antenna complex, alpha/beta subunit 3872 66.67 0 4328073..4328276 + 67 91978354 - RPD_3891 - antenna complex, alpha/beta subunit 3873 65.75 0 4328844..4329062 + 72 91978355 - RPD_3892 - hypothetical protein 3874 71.16 +1 4329311..4330936 - 541 91978356 - RPD_3893 - hypothetical protein 3875 66.82 0 4330974..4332266 - 430 91978357 - RPD_3894 - adenylosuccinate synthetase 3876 65.45 0 4332590..4333414 + 274 91978358 - RPD_3895 - aldo/keto reductase 3877 66.67 0 4333439..4334065 - 208 91978359 - RPD_3896 - methyltransferase type 11 3878 66.47 0 4334718..4335755 + 345 91978360 - RPD_3897 - hypothetical protein 3879 62.30 0 4335788..4336222 - 144 91978361 - RPD_3898 - hypothetical protein 3880 66.19 0 4336482..4337327 + 281 91978362 - RPD_3899 - hypothetical protein 3881 66.76 0 4337380..4338405 + 341 91978363 - RPD_3900 - hypothetical protein 3882 66.97 0 4338509..4339486 + 325 91978364 - RPD_3901 - hypothetical protein 3883 66.15 0 4339557..4340528 - 323 91978365 - RPD_3902 - rubrerythrin 3884 62.46 0 4340710..4342065 + 451 91978366 - RPD_3903 - hypothetical protein 3885 65.02 0 4342248..4343948 - 566 91978367 - RPD_3904 - chemotaxis sensory transducer 3886 64.47 0 4344160..4345749 - 529 91978368 - RPD_3905 - D-3-phosphoglycerate dehydrogenase 3887 66.92 0 4345918..4347087 - 389 91978369 - RPD_3906 - phosphoserine aminotransferase 3888 68.08 0 4347306..4348580 - 424 91978370 - RPD_3907 - chemotaxis sensory transducer 3889 58.86 -1 4348585..4349109 - 174 91978371 - RPD_3908 - methyl-accepting chemotaxis sensory transducer 3890 67.52 0 4349272..4349742 - 156 91978372 - RPD_3909 - GCN5-related N-acetyltransferase 3891 66.01 0 4349739..4350344 - 201 91978373 - RPD_3910 - glutathione S-transferase-like 3892 64.03 0 4350415..4351209 - 264 91978374 - RPD_3911 - hypothetical protein 3893 64.18 0 4351364..4352206 - 280 91978375 - RPD_3912 - hypothetical protein 3894 65.32 0 4352553..4353818 - 421 91978376 - RPD_3913 - major facilitator transporter 3895 66.15 0 4353999..4355351 - 450 91978377 - RPD_3914 - phosphoglucosamine mutase 3896 62.64 0 4355563..4355736 - 57 91978378 - RPD_3915 - hypothetical protein 3897 63.68 0 4355903..4357042 + 379 91978379 - RPD_3916 - L-lactate dehydrogenase (cytochrome) 3898 66.42 0 4357187..4358002 + 271 91978380 - RPD_3917 - enoyl-CoA hydratase/isomerase 3899 66.03 0 4358100..4358729 + 209 91978381 - RPD_3918 - hypothetical protein 3900 68.78 +1 4358856..4359707 - 283 91978382 - RPD_3919 - shikimate 5-dehydrogenase 3901 68.10 0 4359704..4359982 - 92 91978383 - RPD_3920 - XRE family transcriptional regulator 3902 67.50 0 4360091..4362142 - 683 91978384 - RPD_3921 - elongation factor G 3903 61.13 -1 4362173..4362913 + 246 91978385 - RPD_3922 - hypothetical protein 3904 70.06 +1 4363017..4363487 - 156 91978386 - RPD_3923 - hypothetical protein 3905 67.61 0 4363732..4364259 - 175 91978387 - RPD_3924 - hypothetical protein 3906 63.51 0 4364397..4365599 - 400 91978388 - RPD_3925 - aspartate aminotransferase 3907 62.65 0 4365672..4365920 - 82 91978389 - RPD_3926 - hypothetical protein 3908 62.45 0 4366045..4366731 + 228 91978390 - RPD_3927 - glutathione S-transferase-like 3909 66.32 0 4367125..4368288 + 387 91978391 - RPD_3928 - glucose sorbosone dehydrogenase 3910 57.78 -2 4368401..4368760 - 119 91978392 - RPD_3929 - hypothetical protein 3911 70.07 +1 4369058..4369909 + 283 91978393 - RPD_3930 - phospholipid/glycerol acyltransferase 3912 65.71 0 4370000..4370941 + 313 91978394 - RPD_3931 - aldo/keto reductase 3913 64.09 0 4371125..4372018 + 297 91978395 - RPD_3932 - hypothetical protein 3914 68.26 0 4372235..4373050 + 271 91978396 - RPD_3933 - HAD family hydrolase 3915 64.33 0 4373401..4374600 + 399 91978397 - RPD_3934 - transposase, IS204/IS1001/IS1096/IS1165 3916 61.06 -1 4374600..4374956 + 118 91978398 - RPD_3935 - putative transposase 3917 61.24 -1 4375060..4376091 + 343 91978399 - RPD_3936 - transposase IS116/IS110/IS902 3918 60.53 -1 4376289..4376663 + 124 91978400 - RPD_3937 - hypothetical protein 3919 48.57 -2 4377190..4378344 - 384 91978401 - RPD_3938 - hypothetical protein 3920 60.00 -1 4378341..4379585 - 414 91978402 - RPD_3939 - MobA/MobL protein 3921 59.38 -1 4379671..4380315 + 214 91978403 - RPD_3940 - Type IV secretory pathway VirD4 components-like 3922 59.83 -1 4380650..4382389 + 579 91978404 - RPD_3941 - hypothetical protein 3923 61.76 0 4382628..4387577 + 1649 91978405 - RPD_3942 - hypothetical protein 3924 58.03 -2 4387641..4388867 + 408 91978406 - RPD_3943 - hypothetical protein 3925 61.55 0 4388864..4389859 + 331 91978407 - RPD_3944 - hypothetical protein 3926 58.71 -1 4389999..4391720 - 573 91978408 - RPD_3945 - hypothetical protein 3927 63.33 0 4392966..4393235 - 89 91978409 - RPD_3948 - conjugal transfer TraD 3928 61.58 0 4393237..4393629 - 130 91978410 - RPD_3949 - hypothetical protein 3929 65.58 0 4393639..4396758 + 1039 91978411 - RPD_3950 - MobA/MobL protein 3930 50.63 -2 4397755..4398546 - 263 91978412 - RPD_3951 - hypothetical protein 3931 52.44 -2 4398770..4400899 - 709 91978413 - RPD_3952 - hypothetical protein 3932 55.06 -2 4400896..4402170 - 424 91978414 - RPD_3953 - metallophosphoesterase 3933 55.42 -2 4402532..4402771 + 79 91978415 - RPD_3954 - hypothetical protein 3934 59.56 -1 4402877..4404100 + 407 91978416 - RPD_3955 - endodeoxyribonuclease RusA 3935 65.66 0 4404206..4405396 - 396 91978417 - RPD_3956 - hypothetical protein 3936 57.20 -2 4405407..4405649 - 80 91978418 - RPD_3957 - hypothetical protein 3937 61.96 0 4405733..4406221 + 162 91978419 - RPD_3958 - hypothetical protein 3938 59.91 -1 4406360..4407988 + 542 91978420 - RPD_3959 - recombinase 3939 70.76 +1 4408125..4408466 - 113 91978421 - RPD_3960 - hypothetical protein 3940 67.14 0 4408508..4409146 - 212 91978422 - RPD_3961 - phosphatidylethanolamine N-methyltransferase 3941 67.99 0 4409165..4410373 - 402 91978423 trmU RPD_3962 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3942 70.27 +1 4410684..4412264 + 526 91978424 - RPD_3963 - flagellar hook-length control protein 3943 64.33 0 4412277..4413005 + 242 91978425 - RPD_3964 - flagellar hook capping protein 3944 67.16 0 4413018..4413836 - 272 91978426 - RPD_3965 - lytic murein transglycosylase 3945 68.33 0 4414075..4414434 + 119 91978427 - RPD_3966 - hypothetical protein 3946 62.94 0 4414558..4415121 - 187 91978428 - RPD_3967 - peptidase C56, PfpI 3947 71.87 +1 4415876..4416202 - 108 91978429 - RPD_3968 - cupin 2, barrel 3948 64.36 0 4416453..4417580 + 375 91978430 - RPD_3969 - 3-oxoacyl-(acyl carrier protein) synthase III 3949 61.64 0 4417706..4417924 + 72 91978431 - RPD_3970 - transcriptional regulator 3950 56.90 -2 4418005..4418997 + 330 91978432 - RPD_3971 - filamentation induced by cAMP protein Fic 3951 62.69 0 4419952..4422087 - 711 91978433 - RPD_3972 - RNA polymerase sigma factor RpoD 3952 68.51 +1 4422346..4424403 - 685 91978434 dnaG RPD_3973 - DNA primase 3953 57.18 -2 4424598..4424945 + 115 91978435 - RPD_3974 - hypothetical protein 3954 60.83 -1 4424965..4425204 + 79 91978436 - RPD_3975 - hypothetical protein 3955 59.67 -1 4425502..4425744 + 80 91978437 - RPD_3976 - hypothetical protein 3956 67.89 0 4425827..4426234 - 135 91978438 - RPD_3977 - hypothetical protein 3957 66.34 0 4426251..4427165 - 304 91978439 - RPD_3978 - transglutaminase-like 3958 67.70 0 4427175..4428047 + 290 91978440 - RPD_3979 - N-formylglutamate amidohydrolase 3959 68.93 +1 4428184..4428801 - 205 91978441 - RPD_3980 - lysine exporter protein LysE/YggA 3960 64.81 0 4428912..4429235 + 107 91978442 - RPD_3981 - helix-turn-helix, type 11 3961 65.15 0 4429228..4429689 + 153 91978443 - RPD_3982 - hypothetical protein 3962 66.90 0 4429729..4430577 - 282 91978444 - RPD_3983 - hypothetical protein 3963 66.42 0 4430991..4432598 - 535 91978445 - RPD_3984 - AMP-dependent synthetase and ligase 3964 63.16 0 4432685..4433140 - 151 91978446 - RPD_3985 - hypothetical protein 3965 65.33 0 4433598..4434791 + 397 91978447 - RPD_3986 - carbamoyl phosphate synthase small subunit 3966 66.44 0 4435092..4438235 + 1047 91978448 - RPD_3987 - excinuclease ABC subunit B 3967 55.13 -2 4438431..4438586 + 51 91978449 - RPD_3988 - hypothetical protein 3968 61.46 -1 4438589..4438876 + 95 91978450 - RPD_3989 - hypothetical protein 3969 67.21 0 4438928..4439293 - 121 91978451 - RPD_3990 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0