version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3751 70.35 +1 4207334..4209100 - 588 91978233 bchD RPD_3770 - magnesium chelatase subunit D 3752 66.47 0 4209097..4210119 - 340 91978234 - RPD_3771 - magnesium chelatase ATPase subunit I 3753 65.66 0 4210128..4211120 - 330 91978235 - RPD_3772 - porphobilinogen deaminase 3754 67.50 0 4211369..4212682 + 437 91978236 - RPD_3773 - hypothetical protein 3755 65.79 0 4212682..4214283 + 533 91978237 - RPD_3774 - hypothetical protein 3756 66.26 0 4214283..4214771 + 162 91978238 - RPD_3775 - hypothetical protein 3757 67.47 0 4214835..4215332 + 165 91978239 - RPD_3776 - hypothetical protein 3758 64.31 0 4215326..4216558 + 410 91978240 - RPD_3777 - coenzyme F420 hydrogenase/dehydrogenase beta subunit-like 3759 61.29 -1 4216665..4217129 + 154 91978241 - RPD_3778 - hypothetical protein 3760 64.16 0 4217206..4217643 - 145 91978242 - RPD_3779 - hypothetical protein 3761 62.81 0 4217749..4220913 - 1054 91978243 - RPD_3780 - hydrophobe/amphiphile efflux-1 HAE1 3762 66.25 0 4220922..4222118 - 398 91978244 - RPD_3781 - secretion protein HlyD 3763 63.04 0 4222451..4223995 - 514 91978245 - RPD_3782 - putative monooxygenase 3764 58.42 -1 4224233..4224523 - 96 91978246 - RPD_3783 - hypothetical protein 3765 60.18 -1 4224535..4225197 - 220 91978247 - RPD_3784 - hypothetical protein 3766 66.46 0 4225216..4226643 - 475 91978248 - RPD_3785 - PUCC protein 3767 58.89 -1 4226832..4227011 - 59 91978249 - RPD_3786 - antenna complex, alpha/beta subunit 3768 59.62 -1 4227024..4227179 - 51 91978250 - RPD_3787 - antenna complex, alpha/beta subunit 3769 65.93 0 4227536..4229854 + 772 91978251 - RPD_3788 - phytochrome 3770 66.67 0 4229858..4230544 + 228 91978252 - RPD_3789 - response regulator receiver 3771 66.67 0 4230685..4230933 - 82 91978253 - RPD_3790 - hypothetical protein 3772 67.56 0 4230972..4232201 - 409 91978254 - RPD_3791 - NnrS 3773 68.54 +1 4232329..4233021 - 230 91978255 - RPD_3792 - NnrU 3774 66.30 0 4233210..4234862 - 550 91978256 - RPD_3793 - phosphoglucomutase 3775 65.86 0 4235125..4236360 + 411 91978257 - RPD_3794 - FAD dependent oxidoreductase 3776 61.75 0 4236368..4237201 - 277 91978258 - RPD_3795 - hypothetical protein 3777 60.53 -1 4237352..4237726 - 124 91978259 - RPD_3796 - response regulator receiver 3778 63.08 0 4237857..4238693 - 278 91978260 - RPD_3797 - metallophosphoesterase 3779 62.02 0 4238714..4238971 - 85 91978261 - RPD_3798 - putative transport system ATP-binding protein 3780 64.44 0 4239355..4239624 + 89 91978262 - RPD_3799 - hypothetical protein 3781 63.89 0 4239893..4240360 + 155 91978263 - RPD_3800 - hypothetical protein 3782 68.63 +1 4240707..4241420 + 237 91978264 - RPD_3801 - GntR-like 3783 69.44 +1 4241433..4243232 + 599 91978265 - RPD_3802 - amidase 3784 65.55 0 4243434..4244237 + 267 91978266 - RPD_3803 - peptidase C26 3785 65.48 0 4244391..4246250 - 619 91978267 - RPD_3804 - dihydroxy-acid dehydratase 3786 62.37 0 4246588..4247379 - 263 91978268 - RPD_3805 - cyclic nucleotide-binding 3787 59.15 -1 4247418..4247723 + 101 91978269 - RPD_3806 - hypothetical protein 3788 65.81 0 4247765..4248229 - 154 91978270 - RPD_3807 - hypothetical protein 3789 64.18 0 4248464..4249990 + 508 91978271 - RPD_3808 - AMP-dependent synthetase and ligase 3790 69.50 +1 4250100..4250876 - 258 91978272 - RPD_3809 - enoyl-CoA hydratase/isomerase 3791 63.09 0 4250921..4252066 - 381 91978273 - RPD_3810 - acyl-CoA dehydrogenase-like 3792 64.73 0 4252077..4252904 - 275 91978274 - RPD_3811 - short-chain dehydrogenase/reductase SDR 3793 63.12 0 4252932..4253354 - 140 91978275 - RPD_3812 - MaoC-like dehydratase 3794 63.09 0 4253351..4253797 - 148 91978276 - RPD_3813 - hypothetical protein 3795 66.75 0 4253808..4254992 - 394 91978277 - RPD_3814 - lipid-transfer protein 3796 61.13 -1 4255032..4255790 + 252 91978278 - RPD_3815 - regulatory protein, TetR 3797 67.50 0 4255787..4257343 + 518 91978279 - RPD_3816 - AMP-dependent synthetase and ligase 3798 64.68 0 4257364..4258068 - 234 91978280 - RPD_3817 - hypothetical protein 3799 66.50 0 4258090..4259283 - 397 91978281 - RPD_3818 - phosphonate metabolism PhnM 3800 61.26 -1 4259280..4260056 - 258 91978282 - RPD_3819 - putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol) 3801 64.70 0 4260113..4260925 + 270 91978283 - RPD_3820 - phosphonate ABC transporter ATP-binding 3802 60.83 -1 4261010..4261951 + 313 91978284 - RPD_3821 - phosphonate-binding periplasmic protein 3803 62.79 0 4262001..4262903 + 300 91978285 - RPD_3822 - phosphonate ABC transporter permease 3804 63.72 0 4262900..4263748 + 282 91978286 - RPD_3823 - phosphonate ABC transporter permease 3805 66.12 0 4263760..4264488 - 242 91978287 - RPD_3824 - GntR family transcriptional regulator 3806 65.67 0 4264565..4265068 + 167 91978288 - RPD_3825 - phosphonate metabolism PhnG 3807 66.67 0 4265071..4265679 + 202 91978289 phnH RPD_3826 - carbon-phosphorus lyase complex subunit 3808 66.12 0 4265679..4266785 + 368 91978290 - RPD_3827 - phosphonate metabolism 3809 63.49 0 4266782..4267663 + 293 91978291 - RPD_3828 - phosphonate metabolism PhnJ 3810 65.67 0 4267656..4268456 + 266 91978292 phnK RPD_3829 - phosphonates transport ATP-binding protein 3811 65.54 0 4268453..4269163 + 236 91978293 - RPD_3830 - phosphonate C-P lyase system, PhnL 3812 66.41 0 4269179..4270333 + 384 91978294 - RPD_3831 - phosphonate metabolism PhnM 3813 66.84 0 4270330..4270923 + 197 91978295 - RPD_3832 - phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN 3814 61.81 0 4270932..4271549 + 205 91978296 - RPD_3833 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 3815 59.28 -1 4271613..4272140 - 175 91978297 - RPD_3834 - Ferritin and Dps 3816 63.79 0 4272420..4273115 + 231 91978298 - RPD_3835 - methyltransferase type 12 3817 65.61 0 4273282..4275267 + 661 91978299 - RPD_3836 - Cache, type 2 3818 64.99 0 4275356..4276549 - 397 91978300 - RPD_3837 - putative deoxyribonuclease 3819 63.89 0 4276641..4277468 - 275 91978301 - RPD_3838 - transglutaminase-like 3820 64.81 0 4277761..4278030 + 89 91978302 - RPD_3839 - hypothetical protein 3821 60.51 -1 4278070..4278345 + 91 91978303 - RPD_3840 - hypothetical protein 3822 62.18 0 4278483..4278638 + 51 91978304 - RPD_3841 - hypothetical protein 3823 68.12 0 4278720..4280099 - 459 91978305 - RPD_3842 - two component, sigma54 specific, transcriptional regulator, Fis family 3824 63.82 0 4280149..4280499 - 116 91978306 - RPD_3843 - flagellar motor switch protein 3825 67.15 0 4280518..4281135 - 205 91978307 fliH RPD_3844 - flagellar assembly protein H 3826 62.81 0 4281135..4282223 - 362 91978308 fliG RPD_3845 - flagellar motor switch protein G 3827 65.35 0 4282230..4283828 - 532 91978309 fliF RPD_3846 - flagellar MS-ring protein 3828 62.32 0 4284003..4284278 - 91 91978310 - RPD_3847 - hypothetical protein 3829 67.54 0 4284555..4286153 - 532 91978311 - RPD_3848 - FAD linked oxidase-like 3830 64.04 0 4286381..4288435 - 684 91978312 - RPD_3849 - Outer membrane autotransporter barrel 3831 66.85 0 4288582..4289115 - 177 91978313 - RPD_3850 - NADH ubiquinone oxidoreductase, 20 kDa subunit 3832 68.39 0 4289118..4290629 - 503 91978314 - RPD_3851 - NADH-ubiquinone oxidoreductase, chain 49kDa 3833 64.53 0 4290646..4292097 - 483 91978315 - RPD_3852 - hydrogenase 4 subunit F 3834 63.95 0 4292094..4292756 - 220 91978316 - RPD_3853 - hypothetical protein 3835 66.77 0 4292759..4293709 - 316 91978317 - RPD_3854 - respiratory-chain NADH dehydrogenase, subunit 1 3836 65.92 0 4293706..4295724 - 672 91978318 - RPD_3855 - hydrogenase 4 subunit B 3837 57.97 -2 4295752..4296096 + 114 91978319 - RPD_3856 - hypothetical protein 3838 68.09 0 4296167..4297009 + 280 91978320 - RPD_3857 - cobalamin 5'-phosphate synthase 3839 64.35 0 4297019..4297363 - 114 91978321 - RPD_3858 - putative formamidase regulatory protein FmdB 3840 62.03 0 4297463..4298692 - 409 91978322 - RPD_3859 - formamidase 3841 63.62 0 4298738..4299427 - 229 91978323 - RPD_3860 - ABC transporter related 3842 61.38 -1 4299439..4300194 - 251 91978324 - RPD_3861 - ABC transporter related 3843 62.24 0 4300205..4301356 - 383 91978325 - RPD_3862 - inner-membrane translocator 3844 62.03 0 4301371..4302297 - 308 91978326 - RPD_3863 - inner-membrane translocator 3845 61.28 -1 4302470..4303732 - 420 91978327 - RPD_3864 - amide-urea binding protein 3846 62.81 0 4303889..4307257 + 1122 91978328 - RPD_3865 - ATP-binding region, ATPase-like 3847 65.05 0 4307247..4308176 + 309 91978329 - RPD_3866 - response regulator receiver 3848 59.75 -1 4308280..4308438 - 52 91978330 - RPD_3867 - hypothetical protein 3849 67.81 0 4308443..4309141 - 232 91978331 - RPD_3868 - hypothetical protein 3850 62.60 0 4309168..4309560 - 130 91978332 - RPD_3869 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0