version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3707 60.24 -1 4161312..4162415 - 367 91978189 - RPD_3726 - magnesium-protoporphyrin IX monomethyl ester cyclase 3708 60.13 -1 4162412..4162717 - 101 91978190 - RPD_3727 - hypothetical protein 3709 63.01 0 4162714..4163205 - 163 91978191 - RPD_3728 - putative photosynthetic complex assembly protein 3710 62.59 0 4163219..4163881 - 220 91978192 - RPD_3729 - putative photosynthetic complex assembly protein 3711 64.44 0 4163878..4164642 - 254 91978193 - RPD_3730 - photosynthetic reaction center subunit H 3712 66.60 0 4164665..4166098 - 477 91978194 - RPD_3731 - PUCC protein 3713 65.81 0 4166095..4166796 - 233 91978195 - RPD_3732 - Mg-protoporphyrin IX methyl transferase 3714 61.13 -1 4166796..4167734 - 312 91978196 chlL RPD_3733 - protochlorophyllide reductase iron-sulfur ATP-binding protein 3715 64.96 0 4167731..4171477 - 1248 91978197 bchH RPD_3734 - magnesium chelatase subunit H 3716 65.24 0 4171452..4173059 - 535 91978198 - RPD_3735 - light-independent protochlorophyllide reductase subunit B 3717 64.88 0 4173062..4174348 - 428 91978199 - RPD_3736 - light-independent protochlorophyllide reductase subunit N 3718 59.42 -1 4174345..4175034 - 229 91978200 - RPD_3737 - 2-vinyl bacteriochlorophyllide hydratase 3719 63.63 0 4175168..4176055 + 295 91978201 - RPD_3738 - cobalamin B12-binding 3720 64.47 0 4176124..4176807 + 227 91978202 - RPD_3739 - Heme oxygenase (decyclizing) 3721 63.71 0 4176909..4179107 - 732 91978203 - RPD_3740 - phytochrome 3722 63.49 0 4179109..4180431 - 440 91978204 - RPD_3741 - transcriptional regulator PpsR 3723 60.71 -1 4180792..4181211 + 139 91978205 - RPD_3742 - cytochrome c, class I 3724 65.58 0 4181337..4181612 - 91 91978206 - RPD_3743 - hypothetical protein 3725 61.75 0 4181654..4182121 - 155 91978207 - RPD_3744 - TspO/MBR family protein 3726 64.59 0 4182138..4183340 - 400 91978208 - RPD_3745 - geranylgeranyl reductase 3727 68.01 0 4183342..4184685 - 447 91978209 - RPD_3746 - PUCC protein 3728 65.66 0 4184688..4185581 - 297 91978210 - RPD_3747 - bacteriochlorophyll/chlorophyll a synthase 3729 63.18 0 4185574..4187007 - 477 91978211 - RPD_3748 - transcriptional regulator PpsR 3730 61.04 -1 4187331..4188254 - 307 91978212 - RPD_3749 - photosynthetic reaction center subunit M 3731 58.03 -2 4188282..4189115 - 277 91978213 - RPD_3750 - photosynthetic reaction center subunit L 3732 57.78 -2 4189248..4189427 - 59 91978214 - RPD_3751 - antenna complex, alpha/beta subunit 3733 55.40 -2 4189440..4189652 - 70 91978215 - RPD_3752 - antenna complex, alpha/beta subunit 3734 59.11 -1 4189796..4190020 - 74 91978216 - RPD_3753 - hypothetical protein 3735 63.71 0 4190097..4191548 - 483 91978217 - RPD_3754 - chlorophyllide reductase subunit Z 3736 65.56 0 4191548..4193170 - 540 91978218 - RPD_3755 - chlorophyllide reductase subunit Y 3737 62.16 0 4193196..4194194 - 332 91978219 - RPD_3756 - chlorophyllide reductase iron protein subunit X 3738 64.96 0 4194194..4195132 - 312 91978220 - RPD_3757 - chlorophyll synthesis pathway protein BchC 3739 65.00 0 4195201..4196343 - 380 91978221 - RPD_3758 - O-methyltransferase family protein 3740 67.82 0 4196484..4197350 - 288 91978222 - RPD_3759 - polyprenyl synthetase 3741 65.84 0 4197472..4199046 + 524 91978223 - RPD_3760 - FAD dependent oxidoreductase 3742 65.51 0 4199053..4200006 + 317 91978224 - RPD_3761 - hydroxyneurosporene synthase 3743 53.59 -2 4200062..4200214 - 50 91978225 - RPD_3762 - hypothetical protein 3744 60.74 -1 4200211..4200345 - 44 91978226 - RPD_3763 - hypothetical protein 3745 65.06 0 4200367..4201299 - 310 91978227 - RPD_3764 - coproporphyrinogen III oxidase 3746 66.10 0 4201498..4202547 - 349 91978228 - RPD_3765 - squalene/phytoene synthase 3747 63.15 0 4202544..4204079 - 511 91978229 - RPD_3766 - amine oxidase 3748 65.32 0 4204157..4205047 - 296 91978230 - RPD_3767 - alpha/beta hydrolase fold 3749 62.79 0 4205058..4206011 - 317 91978231 - RPD_3768 - alpha/beta hydrolase fold 3750 65.43 0 4206123..4207169 + 348 91978232 hemE RPD_3769 - uroporphyrinogen decarboxylase 3751 70.35 +1 4207334..4209100 - 588 91978233 bchD RPD_3770 - magnesium chelatase subunit D 3752 66.47 0 4209097..4210119 - 340 91978234 - RPD_3771 - magnesium chelatase ATPase subunit I 3753 65.66 0 4210128..4211120 - 330 91978235 - RPD_3772 - porphobilinogen deaminase 3754 67.50 0 4211369..4212682 + 437 91978236 - RPD_3773 - hypothetical protein 3755 65.79 0 4212682..4214283 + 533 91978237 - RPD_3774 - hypothetical protein 3756 66.26 0 4214283..4214771 + 162 91978238 - RPD_3775 - hypothetical protein 3757 67.47 0 4214835..4215332 + 165 91978239 - RPD_3776 - hypothetical protein 3758 64.31 0 4215326..4216558 + 410 91978240 - RPD_3777 - coenzyme F420 hydrogenase/dehydrogenase beta subunit-like 3759 61.29 -1 4216665..4217129 + 154 91978241 - RPD_3778 - hypothetical protein 3760 64.16 0 4217206..4217643 - 145 91978242 - RPD_3779 - hypothetical protein 3761 62.81 0 4217749..4220913 - 1054 91978243 - RPD_3780 - hydrophobe/amphiphile efflux-1 HAE1 3762 66.25 0 4220922..4222118 - 398 91978244 - RPD_3781 - secretion protein HlyD 3763 63.04 0 4222451..4223995 - 514 91978245 - RPD_3782 - putative monooxygenase 3764 58.42 -1 4224233..4224523 - 96 91978246 - RPD_3783 - hypothetical protein 3765 60.18 -1 4224535..4225197 - 220 91978247 - RPD_3784 - hypothetical protein 3766 66.46 0 4225216..4226643 - 475 91978248 - RPD_3785 - PUCC protein 3767 58.89 -1 4226832..4227011 - 59 91978249 - RPD_3786 - antenna complex, alpha/beta subunit 3768 59.62 -1 4227024..4227179 - 51 91978250 - RPD_3787 - antenna complex, alpha/beta subunit 3769 65.93 0 4227536..4229854 + 772 91978251 - RPD_3788 - phytochrome 3770 66.67 0 4229858..4230544 + 228 91978252 - RPD_3789 - response regulator receiver 3771 66.67 0 4230685..4230933 - 82 91978253 - RPD_3790 - hypothetical protein 3772 67.56 0 4230972..4232201 - 409 91978254 - RPD_3791 - NnrS 3773 68.54 +1 4232329..4233021 - 230 91978255 - RPD_3792 - NnrU 3774 66.30 0 4233210..4234862 - 550 91978256 - RPD_3793 - phosphoglucomutase 3775 65.86 0 4235125..4236360 + 411 91978257 - RPD_3794 - FAD dependent oxidoreductase 3776 61.75 0 4236368..4237201 - 277 91978258 - RPD_3795 - hypothetical protein 3777 60.53 -1 4237352..4237726 - 124 91978259 - RPD_3796 - response regulator receiver 3778 63.08 0 4237857..4238693 - 278 91978260 - RPD_3797 - metallophosphoesterase 3779 62.02 0 4238714..4238971 - 85 91978261 - RPD_3798 - putative transport system ATP-binding protein 3780 64.44 0 4239355..4239624 + 89 91978262 - RPD_3799 - hypothetical protein 3781 63.89 0 4239893..4240360 + 155 91978263 - RPD_3800 - hypothetical protein 3782 68.63 +1 4240707..4241420 + 237 91978264 - RPD_3801 - GntR-like 3783 69.44 +1 4241433..4243232 + 599 91978265 - RPD_3802 - amidase 3784 65.55 0 4243434..4244237 + 267 91978266 - RPD_3803 - peptidase C26 3785 65.48 0 4244391..4246250 - 619 91978267 - RPD_3804 - dihydroxy-acid dehydratase 3786 62.37 0 4246588..4247379 - 263 91978268 - RPD_3805 - cyclic nucleotide-binding 3787 59.15 -1 4247418..4247723 + 101 91978269 - RPD_3806 - hypothetical protein 3788 65.81 0 4247765..4248229 - 154 91978270 - RPD_3807 - hypothetical protein 3789 64.18 0 4248464..4249990 + 508 91978271 - RPD_3808 - AMP-dependent synthetase and ligase 3790 69.50 +1 4250100..4250876 - 258 91978272 - RPD_3809 - enoyl-CoA hydratase/isomerase 3791 63.09 0 4250921..4252066 - 381 91978273 - RPD_3810 - acyl-CoA dehydrogenase-like 3792 64.73 0 4252077..4252904 - 275 91978274 - RPD_3811 - short-chain dehydrogenase/reductase SDR 3793 63.12 0 4252932..4253354 - 140 91978275 - RPD_3812 - MaoC-like dehydratase 3794 63.09 0 4253351..4253797 - 148 91978276 - RPD_3813 - hypothetical protein 3795 66.75 0 4253808..4254992 - 394 91978277 - RPD_3814 - lipid-transfer protein 3796 61.13 -1 4255032..4255790 + 252 91978278 - RPD_3815 - regulatory protein, TetR 3797 67.50 0 4255787..4257343 + 518 91978279 - RPD_3816 - AMP-dependent synthetase and ligase 3798 64.68 0 4257364..4258068 - 234 91978280 - RPD_3817 - hypothetical protein 3799 66.50 0 4258090..4259283 - 397 91978281 - RPD_3818 - phosphonate metabolism PhnM 3800 61.26 -1 4259280..4260056 - 258 91978282 - RPD_3819 - putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol) 3801 64.70 0 4260113..4260925 + 270 91978283 - RPD_3820 - phosphonate ABC transporter ATP-binding 3802 60.83 -1 4261010..4261951 + 313 91978284 - RPD_3821 - phosphonate-binding periplasmic protein 3803 62.79 0 4262001..4262903 + 300 91978285 - RPD_3822 - phosphonate ABC transporter permease 3804 63.72 0 4262900..4263748 + 282 91978286 - RPD_3823 - phosphonate ABC transporter permease 3805 66.12 0 4263760..4264488 - 242 91978287 - RPD_3824 - GntR family transcriptional regulator 3806 65.67 0 4264565..4265068 + 167 91978288 - RPD_3825 - phosphonate metabolism PhnG 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0