version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 318 70.06 +1 368865..370073 - 402 91974800 - RPD_0320 - beta-ketoadipyl CoA thiolase 319 70.35 +1 370238..373009 + 923 91974801 - RPD_0321 - DNA mismatch repair protein 320 64.68 0 373035..374597 - 520 91974802 - RPD_0322 - Acetyl-CoA hydrolase 321 63.39 0 375533..376999 - 488 91974803 - RPD_0323 - putative Omp2b porin 322 60.39 -1 377484..377993 + 169 91974804 - RPD_0324 - regulatory protein, MarR 323 64.65 0 378222..379013 - 263 91974805 - RPD_0325 - hypothetical protein 324 69.41 +1 379721..380266 + 181 91974806 - RPD_0326 - hypothetical protein 325 61.01 -1 380435..381637 + 400 91974807 - RPD_0327 - histidine kinase, dimerisation/phosphoacceptor 326 59.23 -1 381649..382092 + 147 91974808 - RPD_0328 - response regulator receiver 327 61.70 0 382089..382913 + 274 91974809 - RPD_0329 - PRC-barrel 328 66.67 0 383067..384146 - 359 91974810 - RPD_0330 - putative ammonia monooxygenase 329 65.29 0 384313..384822 + 169 91974811 - RPD_0331 - hypothetical protein 330 68.75 +1 384922..385305 + 127 91974812 - RPD_0332 - LrgA 331 67.77 0 385302..386024 + 240 91974813 - RPD_0333 - LrgB-like protein 332 68.16 0 386266..386733 + 155 91974814 - RPD_0334 - hypothetical protein 333 69.27 +1 386777..387850 - 357 91974815 - RPD_0335 - phospholipase/carboxylesterase 334 63.83 0 388007..389698 - 563 91974816 - RPD_0336 - chemotaxis sensory transducer 335 64.78 0 390010..391701 - 563 91974817 - RPD_0337 - chemotaxis sensory transducer 336 64.94 0 392283..393380 + 365 91974818 - RPD_0338 - hypothetical protein 337 70.02 +1 393530..394186 - 218 91974819 - RPD_0339 - anti-sigma factor ChrR, putative 338 61.90 0 394183..394770 - 195 91974820 - RPD_0340 - RNA polymerase sigma factor RpoE 339 63.00 0 395002..395274 + 90 91974821 - RPD_0341 - hypothetical protein 340 61.65 0 395596..396153 - 185 91974822 - RPD_0342 - HNH endonuclease 341 67.47 0 396439..397437 + 332 91974823 - RPD_0343 - cysteine synthase A 342 69.29 +1 397736..399184 - 482 91974824 - RPD_0344 - glycogen/starch synthases, ADP-glucose type 343 63.29 0 399181..400455 - 424 91974825 glgC RPD_0345 - glucose-1-phosphate adenylyltransferase 344 64.16 0 400757..403072 - 771 91974826 - RPD_0346 - oxidoreductase alpha (molybdopterin) subunit 345 69.44 +1 409676..410614 - 312 91974827 - RPD_0347 - PfkB 346 65.21 0 410826..411650 - 274 91974828 - RPD_0348 - hypothetical protein 347 65.40 0 411884..412120 + 78 91974829 - RPD_0349 - ChaB 348 68.28 0 412315..414354 - 679 91974830 - RPD_0350 - carbamoyl-phosphate synthase L chain, ATP-binding 349 65.73 0 414354..415961 - 535 91974831 - RPD_0351 - propionyl-CoA carboxylase 350 63.27 0 416057..416791 - 244 91974832 - RPD_0352 - short-chain dehydrogenase/reductase SDR 351 59.84 -1 417000..418610 - 536 91974833 - RPD_0353 - AMP-dependent synthetase and ligase 352 58.84 -1 418647..419438 - 263 91974834 - RPD_0354 - enoyl-CoA hydratase/isomerase 353 64.39 0 419471..420262 - 263 91974835 - RPD_0355 - short-chain dehydrogenase/reductase SDR 354 59.80 -1 420259..421437 - 392 91974836 - RPD_0356 - isovaleryl-CoA dehydrogenase 355 59.01 -1 421620..422846 - 408 91974837 - RPD_0357 - extracellular ligand-binding receptor 356 57.40 -2 423299..424021 + 240 91974838 - RPD_0358 - regulatory protein, TetR 357 69.32 +1 424666..425946 + 426 91974839 - RPD_0359 - pseudouridine synthase RluD 358 64.89 0 426165..427064 + 299 91974840 - RPD_0360 - RNA polymerase factor sigma-32 359 60.88 -1 427197..427559 - 120 91974841 - RPD_0361 - hypothetical protein 360 65.22 0 427695..428594 - 299 91974842 - RPD_0362 - beta-lactamase-like 361 66.67 0 428704..429039 + 111 91974843 - RPD_0363 - regulatory protein, ArsR 362 67.03 0 429057..429875 + 272 91974844 - RPD_0364 - hypothetical protein 363 65.24 0 429936..431549 - 537 91974845 - RPD_0365 - phosphoenolpyruvate carboxykinase 364 67.76 0 431739..432473 - 244 91974846 - RPD_0366 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 365 62.39 0 432687..433388 + 233 91974847 - RPD_0367 - winged helix family two component transcriptional regulator 366 67.79 0 433595..435286 + 563 91974848 - RPD_0368 - periplasmic sensor signal transduction histidine kinase 367 68.18 0 435283..435744 + 153 91974849 - RPD_0369 - HPr kinase 368 61.87 0 435884..436342 + 152 91974850 - RPD_0370 - PTS system fructose subfamily IIA component 369 66.07 0 436339..436674 + 111 91974851 - RPD_0371 - phosphotransferase system, HPr 370 69.78 +1 436731..438272 - 513 91974852 - RPD_0372 - hypothetical protein 371 64.19 0 438293..440227 + 644 91974853 - RPD_0373 - GTP-binding protein LepA 372 48.18 -2 440240..440926 + 228 91974854 - RPD_0374 - hypothetical protein 373 67.93 0 441249..441485 + 78 91974855 - RPD_0375 - hypothetical protein 374 64.29 0 441476..441811 + 111 91974856 - RPD_0376 - hypothetical protein 375 67.05 0 441925..443745 + 606 91974857 aceK RPD_0377 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 376 66.80 0 443977..444726 + 249 91974858 - RPD_0378 - CysZ-like protein 377 70.53 +1 445371..446354 + 327 91974859 - RPD_0379 - alpha/beta hydrolase fold 378 68.12 0 446518..448239 + 573 91974860 - RPD_0380 - peptidase S10, serine carboxypeptidase 379 64.74 0 448307..449083 - 258 91974861 - RPD_0381 - endonuclease III 380 62.02 0 449106..449621 + 171 91974862 - RPD_0382 - hypothetical protein 381 70.42 +1 449638..450570 + 310 91974863 - RPD_0383 - methylated-DNA--protein-cysteine methyltransferase 382 66.20 0 450661..452175 + 504 91974864 - RPD_0384 - phosphoglyceromutase 383 68.63 +1 452216..453031 - 271 91974865 - RPD_0385 - dihydrodipicolinate reductase 384 62.50 0 453124..453435 - 103 91974866 - RPD_0386 - hypothetical protein 385 68.36 0 453455..454162 - 235 91974867 - RPD_0387 - orotidine 5'-phosphate decarboxylase 386 64.95 0 454169..454750 - 193 91974868 - RPD_0388 - NADPH-dependent FMN reductase 387 63.02 0 454899..455501 - 200 91974869 - RPD_0389 - putative phospholipid N-methyltransferase 388 65.12 0 455595..456755 - 386 91974870 - RPD_0390 - chaperone DnaJ 389 63.51 0 456864..458765 - 633 91974871 - RPD_0391 - molecular chaperone DnaK 390 67.62 0 459160..460104 + 314 91974872 - RPD_0392 - hypothetical protein 391 65.86 0 460221..460841 - 206 91974873 - RPD_0393 - GrpE protein 392 67.13 0 460941..462029 - 362 91974874 hrcA RPD_0394 - heat-inducible transcription repressor 393 65.97 0 462181..462894 + 237 91974875 rph RPD_0395 - ribonuclease PH 394 68.72 +1 462947..463579 + 210 91974876 - RPD_0396 - putative deoxyribonucleotide triphosphate pyrophosphatase 395 67.79 0 463569..464726 + 385 91974877 - RPD_0397 - coproporphyrinogen III oxidase 396 69.92 +1 464836..466035 - 399 91974878 - RPD_0398 - extracellular ligand-binding receptor 397 67.51 0 466232..467185 + 317 91974879 - RPD_0399 - hypothetical protein 398 69.95 +1 467172..467567 + 131 91974880 - RPD_0400 - hypothetical protein 399 64.01 0 467651..468592 + 313 91974881 - RPD_0401 - glutathione synthetase 400 64.20 0 468696..469424 + 242 91974882 - RPD_0402 - regulatory protein, LuxR 401 64.23 0 469502..470158 + 218 91974883 - RPD_0403 - autoinducer (acylhomoserine lactone) synthase 402 61.33 -1 470155..470379 + 74 91974884 - RPD_0404 - hypothetical protein 403 70.70 +1 470489..472027 + 512 91974885 - RPD_0405 - Mg chelatase-related protein 404 66.87 0 472132..472617 + 161 91974886 - RPD_0406 - hypothetical protein 405 66.82 0 472732..474684 + 650 91974887 - RPD_0407 - ATP-binding region, ATPase-like 406 66.27 0 474891..475904 + 337 91974888 - RPD_0408 - hypothetical protein 407 64.05 0 476038..476994 - 318 91974889 - RPD_0409 - pantothenate kinase 408 65.74 0 477185..477508 - 107 91974890 hisE RPD_0410 - phosphoribosyl-ATP pyrophosphatase 409 65.62 0 477564..478331 - 255 91974891 - RPD_0411 - imidazole glycerol phosphate synthase subunit HisF 410 68.43 0 478339..479076 - 245 91974892 - RPD_0412 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 411 65.59 0 479255..479905 - 216 91974893 hisH RPD_0413 - imidazole glycerol phosphate synthase subunit HisH 412 68.98 +1 479902..480420 - 172 91974894 - RPD_0414 - hypothetical protein 413 63.97 0 480449..481042 - 197 91974895 - RPD_0415 - imidazoleglycerol-phosphate dehydratase 414 65.46 0 481225..481806 + 193 91974896 - RPD_0416 - ATP-dependent protease peptidase subunit 415 65.64 0 481803..482288 + 161 91974897 - RPD_0417 - GCN5-related N-acetyltransferase 416 64.90 0 482285..483586 + 433 91974898 hslU RPD_0418 - ATP-dependent protease ATP-binding subunit 417 69.35 +1 483691..484287 - 198 91974899 - RPD_0419 - Smr protein/MutS2 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0