version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3552 64.86 0 3972036..3974642 - 868 91978034 - RPD_3569 - hypothetical protein 3553 63.28 0 3974943..3975887 + 314 91978035 ispH RPD_3570 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3554 62.70 0 3975928..3977088 + 386 91978036 - RPD_3571 - radical SAM family protein 3555 67.48 0 3977017..3977757 - 246 91978037 - RPD_3572 - hypothetical protein 3556 65.19 0 3977754..3979718 - 654 91978038 - RPD_3573 - squalene cyclase 3557 69.13 +1 3979758..3981014 - 418 91978039 - RPD_3574 - amine oxidase 3558 67.26 0 3981014..3981853 - 279 91978040 - RPD_3575 - squalene/phytoene synthase 3559 65.98 0 3981850..3982728 - 292 91978041 - RPD_3576 - squalene/phytoene synthase 3560 62.96 0 3982981..3983223 - 80 91978042 - RPD_3577 - hypothetical protein 3561 65.26 0 3983641..3984138 + 165 91978043 - RPD_3578 - hypothetical protein 3562 65.91 0 3984365..3986731 - 788 91978044 - RPD_3579 - RND superfamily transporter 3563 62.31 0 3987142..3988725 - 527 91978045 - RPD_3580 - radical SAM family protein 3564 66.31 0 3989044..3990747 - 567 91978046 - RPD_3581 - methyl-accepting chemotaxis sensory transducer 3565 60.31 -1 3990812..3991267 - 151 91978047 - RPD_3582 - Cache, type 2 3566 66.89 0 3991491..3992369 - 292 91978048 - RPD_3583 - transglutaminase-like 3567 70.38 +1 3992366..3994867 - 833 91978049 - RPD_3584 - hypothetical protein 3568 66.55 0 3994892..3998278 - 1128 91978050 - RPD_3585 - transglutaminase-like 3569 63.42 0 3998440..3999270 - 276 91978051 - RPD_3586 - HpcH/HpaI aldolase 3570 68.85 +1 3999364..4000464 - 366 91978052 - RPD_3587 - malate/L-lactate dehydrogenase 3571 64.65 0 4000578..4001072 - 164 91978053 - RPD_3588 - homoprotocatechuate degradation transcriptional regulator HpaR 3572 66.29 0 4001289..4002095 + 268 91978054 - RPD_3589 - 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 3573 65.66 0 4002115..4002513 + 132 91978055 - RPD_3590 - 5-carboxymethyl-2-hydroxymuconate isomerase 3574 67.82 0 4002506..4004062 + 518 91978056 - RPD_3591 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 3575 64.93 0 4004229..4005206 + 325 91978057 - RPD_3592 - 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD 3576 67.35 0 4005364..4006239 + 291 91978058 - RPD_3593 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 3577 69.43 +1 4006270..4007895 + 541 91978059 - RPD_3594 - hypothetical protein 3578 69.57 +1 4007919..4008572 - 217 91978060 - RPD_3595 - 2OG-Fe(II) oxygenase 3579 67.89 0 4008926..4009252 + 108 91978061 - RPD_3596 - hypothetical protein 3580 66.91 0 4009266..4009676 - 136 91978062 - RPD_3597 - hypothetical protein 3581 65.12 0 4009907..4010293 + 128 91978063 - RPD_3598 - hypothetical protein 3582 60.49 -1 4010376..4010780 - 134 91978064 - RPD_3599 - hypothetical protein 3583 69.20 +1 4011106..4011972 - 288 91978065 - RPD_3600 - hypothetical protein 3584 62.67 0 4012014..4012688 - 224 91978066 - RPD_3601 - cyclic nucleotide-binding 3585 69.73 +1 4013020..4013802 + 260 91978067 - RPD_3602 - enoyl-CoA hydratase/isomerase 3586 68.24 0 4013828..4014526 - 232 91978068 - RPD_3603 - nitroreductase 3587 65.38 0 4014693..4015937 - 414 91978069 - RPD_3604 - acyl-CoA dehydrogenase-like 3588 66.03 0 4016118..4017365 - 415 91978070 - RPD_3605 - acyl-CoA dehydrogenase-like 3589 67.46 0 4017376..4018503 - 375 91978071 - RPD_3606 - acyl-CoA dehydrogenase-like 3590 66.93 0 4018649..4020523 - 624 91978072 - RPD_3607 - acyl-CoA synthetase 3591 66.17 0 4020582..4021388 - 268 91978073 - RPD_3608 - enoyl-CoA hydratase/isomerase 3592 67.85 0 4021580..4022338 - 252 91978074 - RPD_3609 - short-chain dehydrogenase/reductase SDR 3593 61.74 0 4022820..4023509 - 229 91978075 - RPD_3610 - TetR family transcriptional regulator 3594 66.84 0 4023640..4024815 + 391 91978076 - RPD_3611 - acetyl-CoA acetyltransferase 3595 64.72 0 4024975..4026519 + 514 91978077 - RPD_3612 - acyl-CoA synthetase 3596 69.62 +1 4026680..4027594 + 304 91978078 - RPD_3613 - hypothetical protein 3597 64.97 0 4027823..4028530 - 235 91978079 - RPD_3614 - putative outer membrane protein 3598 65.16 0 4028661..4030319 - 552 91978080 - RPD_3615 - hypothetical protein 3599 62.15 0 4030424..4030711 - 95 91978081 - RPD_3616 - twin-arginine translocation pathway signal 3600 67.86 0 4031300..4033315 - 671 91978082 - RPD_3617 - autotransporter beta-domain-containing protein 3601 65.43 0 4033900..4035756 - 618 91978083 - RPD_3618 - acyl-CoA dehydrogenase-like 3602 67.48 0 4035844..4036332 + 162 91978084 - RPD_3619 - CinA-like 3603 64.27 0 4036339..4036713 - 124 91978085 - RPD_3620 - crcB protein 3604 58.63 -1 4036876..4037472 - 198 91978086 - RPD_3621 - superoxide dismutase 3605 65.70 0 4037649..4038884 - 411 91978087 - RPD_3622 - major facilitator transporter 3606 69.36 +1 4039143..4040516 + 457 91978088 - RPD_3623 - MATE efflux family protein 3607 66.67 0 4040638..4041081 + 147 91978089 - RPD_3624 - hypothetical protein 3608 67.36 0 4041207..4042358 - 383 91978090 - RPD_3625 - hypothetical protein 3609 61.81 0 4042436..4042579 - 47 91978091 - RPD_3626 - hypothetical protein 3610 63.81 0 4042795..4044018 + 407 91978092 - RPD_3627 - metallophosphoesterase 3611 68.72 +1 4044015..4047470 + 1151 91978093 - RPD_3628 - hypothetical protein 3612 62.52 0 4048610..4049380 + 256 91978094 - RPD_3629 - hypothetical protein 3613 61.47 -1 4049364..4052885 + 1173 91978095 - RPD_3630 - DEAD/DEAH box helicase-like 3614 61.55 0 4052958..4054481 - 507 91978096 - RPD_3631 - hypothetical protein 3615 61.62 0 4054478..4055923 - 481 91978097 - RPD_3632 - hypothetical protein 3616 64.46 0 4056261..4056668 + 135 91978098 - RPD_3633 - hypothetical protein 3617 63.33 0 4056712..4057161 + 149 91978099 - RPD_3634 - hypothetical protein 3618 63.64 0 4057164..4057889 + 241 91978100 - RPD_3635 - hypothetical protein 3619 63.56 0 4058037..4059227 + 396 91978101 - RPD_3636 - DNA polymerase IV 3620 64.21 0 4059446..4061440 - 664 91978102 - RPD_3637 - iron permease FTR1 3621 63.40 0 4061600..4062580 - 326 91978103 - RPD_3638 - bile acid:sodium symporter 3622 57.00 -2 4062666..4063058 + 130 91978104 - RPD_3639 - regulatory protein, ArsR 3623 60.64 -1 4063165..4063413 - 82 91978105 - RPD_3640 - putative silver efflux pump-like 3624 62.86 0 4063410..4063724 - 104 91978106 - RPD_3641 - putative silver efflux pump-like 3625 62.44 0 4063699..4064598 - 299 91978107 - RPD_3642 - cation diffusion facilitator family transporter 3626 65.93 0 4064637..4066817 - 726 91978108 - RPD_3643 - heavy metal translocating P-type ATPase 3627 61.67 0 4066954..4068093 - 379 91978109 - RPD_3644 - hypothetical protein 3628 62.33 0 4068142..4068510 - 122 91978110 - RPD_3645 - hypothetical protein 3629 63.89 0 4068553..4071723 - 1056 91978111 - RPD_3646 - heavy metal efflux pump CzcA 3630 61.02 -1 4071826..4072782 - 318 91978112 - RPD_3647 - secretion protein HlyD 3631 66.75 0 4072779..4074053 - 424 91978113 - RPD_3648 - outer membrane efflux protein 3632 60.10 -1 4074112..4074507 - 131 91978114 - RPD_3649 - hypothetical protein 3633 58.13 -1 4074626..4075597 - 323 91978115 - RPD_3650 - hypothetical protein 3634 56.25 -2 4076753..4076944 - 63 91978116 - RPD_3651 - hypothetical protein 3635 65.02 0 4077202..4077807 + 201 91978117 - RPD_3652 - hypothetical protein 3636 67.78 0 4077817..4078356 + 179 91978118 - RPD_3653 - hypothetical protein 3637 64.54 0 4078362..4079159 + 265 91978119 - RPD_3654 - metallophosphoesterase 3638 66.50 0 4079247..4079837 + 196 91978120 - RPD_3655 - hypothetical protein 3639 63.26 0 4079834..4081918 + 694 91978121 - RPD_3656 - AAA ATPase, central region 3640 61.80 0 4081934..4082200 + 88 91978122 - RPD_3657 - hypothetical protein 3641 63.68 0 4082312..4083148 + 278 91978123 - RPD_3658 - hypothetical protein 3642 60.43 -1 4083145..4085502 + 785 91978124 - RPD_3659 - integrase catalytic subunit 3643 57.78 -2 4085511..4086500 + 329 91978125 - RPD_3660 - hypothetical protein 3644 60.82 -1 4086497..4088977 + 826 91978126 - RPD_3661 - hypothetical protein 3645 54.55 -2 4088978..4089703 - 241 91978127 - RPD_3662 - hypothetical protein 3646 66.29 0 4089859..4090125 - 88 91978128 - RPD_3663 - hypothetical protein 3647 64.20 0 4090348..4091076 + 242 91978129 - RPD_3664 - hypothetical protein 3648 68.51 +1 4091510..4092757 - 415 91978130 - RPD_3665 - major facilitator transporter 3649 66.58 0 4092920..4095154 + 744 91978131 flhA RPD_3666 - flagellar biosynthesis protein FlhA 3650 59.70 -1 4095480..4095680 + 66 91978132 - RPD_3667 - hypothetical protein 3651 67.67 0 4095925..4096824 - 299 91978133 - RPD_3668 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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