version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3415 68.14 0 3814600..3815208 + 202 91977897 - RPD_3431 - thiamine-phosphate pyrophosphorylase 3416 64.80 0 3815473..3817398 + 641 91977898 - RPD_3432 - thiamine biosynthesis protein ThiC 3417 48.97 -2 3817559..3818338 - 259 91977899 - RPD_3433 - hypothetical protein 3418 59.83 -1 3818910..3819143 - 77 91977900 - RPD_3434 - hypothetical protein 3419 47.40 -2 3819600..3819983 + 127 91977901 - RPD_3436 - hypothetical protein 3420 71.13 +1 3821432..3821857 - 141 91977902 - RPD_3437 - hypothetical protein 3421 66.49 0 3822059..3822625 + 188 91977903 - RPD_3438 - endoribonuclease L-PSP 3422 65.88 0 3822817..3823830 + 337 91977904 - RPD_3439 - hypothetical protein 3423 65.06 0 3824062..3825243 + 393 91977905 - RPD_3440 - putative cytochrome P450 3424 67.62 0 3825464..3826090 + 208 91977906 - RPD_3441 - SOUL heme-binding protein 3425 67.07 0 3826158..3826403 + 81 91977907 - RPD_3442 - hypothetical protein 3426 66.25 0 3826529..3827005 + 158 91977908 - RPD_3443 - hypothetical protein 3427 65.94 0 3827119..3827670 + 183 91977909 - RPD_3444 - hypothetical protein 3428 57.76 -2 3827713..3828195 - 160 91977910 - RPD_3445 - bacterioferritin 3429 59.67 -1 3828345..3828587 + 80 91977911 - RPD_3446 - hypothetical protein 3430 68.93 +1 3828994..3829302 + 102 91977912 - RPD_3447 - hypothetical protein 3431 71.23 +1 3829522..3829806 + 94 91977913 - RPD_3448 - hypothetical protein 3432 64.94 0 3829927..3831255 - 442 91977914 - RPD_3449 - lytic murein transglycosylase 3433 61.62 0 3831236..3831829 - 197 91977915 - RPD_3450 - hypothetical protein 3434 66.28 0 3831949..3832719 - 256 91977916 - RPD_3451 - trans-aconitate 2-methyltransferase 3435 62.42 0 3833015..3834664 - 549 91977917 - RPD_3452 - putative ABC transporter ATP-binding protein 3436 61.84 0 3834898..3835104 + 68 91977918 - RPD_3453 - hypothetical protein 3437 68.53 +1 3835200..3836432 - 410 91977919 - RPD_3454 - ErfK/YbiS/YcfS/YnhG 3438 61.38 -1 3836627..3836872 - 81 91977920 - RPD_3455 - hypothetical protein 3439 69.22 +1 3837155..3837859 + 234 91977921 - RPD_3456 - hypothetical protein 3440 67.13 0 3837917..3838774 - 285 91977922 - RPD_3457 - 3-mercaptopyruvate sulfurtransferase 3441 66.19 0 3838888..3839310 - 140 91977923 - RPD_3458 - rhodanese-like protein 3442 61.17 -1 3839357..3840592 - 411 91977924 - RPD_3459 - hypothetical protein 3443 62.12 0 3840700..3842634 + 644 91977925 - RPD_3460 - GGDEF domain-containing protein 3444 65.10 0 3842737..3842991 + 84 91977926 - RPD_3461 - transglycosylase-associated protein 3445 61.57 0 3843096..3843938 + 280 91977927 - RPD_3462 - ATPase 3446 65.61 0 3844038..3844322 - 94 91977928 - RPD_3463 - hypothetical protein 3447 64.23 0 3844438..3845052 - 204 91977929 - RPD_3464 - GCN5-related N-acetyltransferase 3448 65.27 0 3845220..3846149 - 309 91977930 - RPD_3465 - senescence marker protein-30 (SMP-30) 3449 64.10 0 3846302..3846652 - 116 91977931 - RPD_3466 - hypothetical protein 3450 65.26 0 3846766..3847050 + 94 91977932 - RPD_3467 - excinuclease ABC subunit C 3451 62.79 0 3847622..3849400 - 592 91977933 - RPD_3468 - radical SAM family protein 3452 62.22 0 3849673..3849942 - 89 91977934 - RPD_3469 - hypothetical protein 3453 58.49 -1 3849939..3850415 - 158 91977935 - RPD_3470 - glutathione peroxidase 3454 69.46 +1 3850432..3851829 - 465 91977936 - RPD_3471 - amidase 3455 60.47 -1 3851897..3852154 - 85 91977937 - RPD_3472 - hypothetical protein 3456 66.26 0 3852277..3853266 + 329 91977938 - RPD_3473 - proline iminopeptidase 3457 66.07 0 3853655..3856507 + 950 91977939 - RPD_3474 - bifunctional transaldolase/phosoglucose isomerase 3458 65.42 0 3856565..3857605 + 346 91977940 - RPD_3475 - 6-phosphogluconate dehydrogenase-like protein 3459 64.15 0 3857602..3859113 + 503 91977941 - RPD_3476 - glucose-6-phosphate 1-dehydrogenase 3460 70.95 +1 3859114..3859860 + 248 91977942 - RPD_3477 - 6-phosphogluconolactonase 3461 66.47 0 3859886..3860389 + 167 91977943 - RPD_3478 - carbohydrate kinase, thermoresistant glucokinase 3462 66.30 0 3860389..3861201 + 270 91977944 - RPD_3479 - Cof protein 3463 66.94 0 3861320..3863125 - 601 91977945 - RPD_3480 - glycoside hydrolase 15-related 3464 66.16 0 3863115..3865088 - 657 91977946 - RPD_3481 - 4-alpha-glucanotransferase 3465 63.75 0 3865277..3867232 + 651 91977947 - RPD_3482 - alpha amylase, catalytic region 3466 63.37 0 3867244..3870546 + 1100 91977948 - RPD_3483 - trehalose synthase-like 3467 65.32 0 3870543..3872693 + 716 91977949 - RPD_3484 - glycogen branching enzyme 3468 62.91 0 3872696..3874774 + 692 91977950 - RPD_3485 - glycogen debranching protein GlgX 3469 66.95 0 3874771..3876534 + 587 91977951 - RPD_3486 - malto-oligosyltrehalose trehalohydrolase 3470 66.31 0 3876534..3879323 + 929 91977952 - RPD_3487 - malto-oligosyltrehalose synthase 3471 60.84 -1 3879533..3879841 - 102 91977953 - RPD_3488 - hypothetical protein 3472 58.18 -1 3880018..3880182 + 54 91977954 - RPD_3489 - hypothetical protein 3473 66.24 0 3880200..3882992 - 930 91977955 ligD RPD_3490 - ATP-dependent DNA ligase 3474 61.92 0 3883133..3884017 + 294 91977956 - RPD_3491 - hypothetical protein 3475 60.38 -1 3884259..3884624 - 121 91977957 - RPD_3492 - hypothetical protein 3476 64.56 0 3884688..3884972 - 94 91977958 - RPD_3493 - SirA-like 3477 69.04 +1 3885050..3885682 + 210 91977959 mobA RPD_3494 - molybdopterin-guanine dinucleotide biosynthesis protein A 3478 66.86 0 3885683..3886735 - 350 91977960 - RPD_3495 - alcohol dehydrogenase GroES-like protein 3479 66.36 0 3886814..3887779 - 321 91977961 - RPD_3496 - 2-nitropropane dioxygenase, NPD 3480 68.74 +1 3887980..3888846 - 288 91977962 - RPD_3497 - urease accessory protein UreF 3481 62.00 0 3889472..3889771 - 99 91977963 - RPD_3498 - antibiotic biosynthesis monooxygenase 3482 62.00 0 3889799..3890098 - 99 91977964 - RPD_3499 - antibiotic biosynthesis monooxygenase 3483 64.39 0 3890446..3892158 - 570 91977965 ureC RPD_3500 - urease subunit alpha 3484 62.34 0 3892172..3892564 - 130 91977966 - RPD_3501 - PilT protein-like 3485 67.02 0 3892561..3892845 - 94 91977967 - RPD_3502 - transcriptional regulator AbrB 3486 63.17 0 3892891..3893205 - 104 91977968 ureB RPD_3503 - urease subunit beta 3487 65.68 0 3893215..3893517 - 100 91977969 ureA RPD_3504 - urease subunit gamma 3488 68.66 +1 3893583..3894434 - 283 91977970 - RPD_3505 - urease accessory protein UreD 3489 65.37 0 3894471..3895166 - 231 91977971 - RPD_3506 - ABC transporter related 3490 61.96 0 3895360..3896124 - 254 91977972 - RPD_3507 - ABC transporter related 3491 64.24 0 3896121..3897314 - 397 91977973 - RPD_3508 - inner-membrane translocator 3492 67.40 0 3897676..3899304 - 542 91977974 - RPD_3509 - inner-membrane translocator 3493 61.00 -1 3899447..3900769 - 440 91977975 - RPD_3510 - twin-arginine translocation pathway signal 3494 68.25 0 3901271..3902719 + 482 91977976 - RPD_3511 - DEAD/DEAH box helicase-like 3495 63.51 0 3902743..3903027 + 94 91977977 - RPD_3512 - translation initiation factor IF-1 3496 62.91 0 3903311..3903523 + 70 91977978 - RPD_3513 - cold-shock DNA-binding domain protein 3497 59.17 -1 3903663..3904289 - 208 91977979 - RPD_3514 - TadE-like 3498 60.44 -1 3904298..3904843 - 181 91977980 - RPD_3515 - TadE-like 3499 62.76 0 3905035..3905520 - 161 91977981 - RPD_3516 - hypothetical protein 3500 62.45 0 3905825..3906061 + 78 91977982 - RPD_3517 - Flp/Fap pilin component 3501 65.52 0 3906390..3906914 + 174 91977983 - RPD_3518 - peptidase A24A, prepilin type IV 3502 65.79 0 3907039..3907839 + 266 91977984 - RPD_3519 - Flp pilus assembly CpaB 3503 65.42 0 3907853..3909295 + 480 91977985 - RPD_3520 - type II and III secretion system protein 3504 67.90 0 3909315..3910046 + 243 91977986 - RPD_3521 - Type IV pili component-like 3505 65.49 0 3910043..3911320 + 425 91977987 - RPD_3522 - putative pilus assembly protein cpaE 3506 65.36 0 3911342..3912790 + 482 91977988 - RPD_3523 - type II secretion system protein E 3507 64.31 0 3912805..3913779 + 324 91977989 - RPD_3524 - type II secretion system protein 3508 63.18 0 3913791..3914765 + 324 91977990 - RPD_3525 - type II secretion system protein 3509 67.38 0 3914862..3915707 - 281 91977991 - RPD_3526 - tetratricopeptide TPR_2 3510 68.77 +1 3915781..3917160 + 459 91977992 - RPD_3527 - leucyl aminopeptidase 3511 68.78 +1 3917153..3918004 + 283 91977993 - RPD_3528 - NLP/P60 3512 67.61 0 3917988..3918626 - 212 91977994 - RPD_3529 - nucleoside diphosphate pyrophosphatase 3513 65.45 0 3918634..3920271 - 545 91977995 - RPD_3530 - ABC transporter related 3514 50.51 -2 3920271..3920759 - 162 91977996 - RPD_3531 - PilT protein-like 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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