version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 283 66.67 0 326169..326474 + 101 91974765 rpmB RPD_0283 - 50S ribosomal protein L28 284 64.26 0 326692..330009 + 1105 91974766 - RPD_0284 - multi-sensor hybrid histidine kinase 285 67.31 0 330097..331176 - 359 91974767 - RPD_0285 - hypothetical protein 286 67.56 0 331173..333068 - 631 91974768 - RPD_0286 - cobalt chelatase, pCobT subunit 287 63.15 0 333223..334218 - 331 91974769 - RPD_0287 - cobalt chelatase, pCobS small subunit 288 64.51 0 334887..335534 - 215 91974770 - RPD_0290 - heat shock protein DnaJ-like 289 61.76 0 335604..335909 + 101 91974771 - RPD_0291 - BolA-like protein 290 67.04 0 335951..337273 - 440 91974772 - RPD_0292 - hypothetical protein 291 69.63 +1 337288..338436 - 382 91974773 - RPD_0293 - 3-dehydroquinate synthase 292 70.08 +1 338433..339047 - 204 91974774 - RPD_0294 - shikimate kinase 293 53.74 -2 339225..339371 + 48 91974775 - RPD_0295 - hypothetical protein 294 67.05 0 339389..340444 + 351 91974776 - RPD_0296 - tyrosine recombinase XerD 295 66.46 0 340595..341569 + 324 91974777 - RPD_0297 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 296 66.12 0 341987..343450 + 487 91974778 - RPD_0298 - hypothetical protein 297 63.92 0 343844..346684 - 946 91974779 - RPD_0299 - preprotein translocase subunit SecA 298 64.81 0 347027..347944 + 305 91974780 - RPD_0300 - PpiC-type peptidyl-prolyl cis-trans isomerase 299 65.06 0 348152..349207 - 351 91974781 - RPD_0301 - acyltransferase 3 300 70.98 +1 349371..351848 + 825 91974782 - RPD_0302 - ATP-dependent helicase HrpB 301 66.28 0 351980..352492 + 170 91974783 - RPD_0303 - hypothetical protein 302 70.90 +1 352495..353367 - 290 91974784 - RPD_0304 - hypothetical protein 303 60.74 -1 353514..354239 - 241 91974785 - RPD_0305 - acetoacetyl-CoA reductase 304 66.58 0 354417..355595 - 392 91974786 - RPD_0306 - acetyl-CoA acetyltransferase 305 58.46 -1 355878..356486 + 202 91974787 - RPD_0307 - polyhydroxyalkanoate synthesis repressor PhaR 306 67.35 0 356488..358239 - 583 91974788 - RPD_0308 - GGDEF domain-containing protein 307 66.17 0 358341..358739 + 132 91974789 - RPD_0309 - hypothetical protein 308 66.51 0 358756..359406 - 216 91974790 - RPD_0310 - hypothetical protein 309 61.75 0 359642..359824 - 60 91974791 rpmF RPD_0311 - 50S ribosomal protein L32 310 67.68 0 360016..360705 - 229 91974792 mtgA RPD_0312 - monofunctional biosynthetic peptidoglycan transglycosylase 311 69.46 +1 360822..361787 + 321 91974793 - RPD_0313 - polyprenyl synthetase 312 66.38 0 361795..362481 + 228 91974794 - RPD_0314 - hypothetical protein 313 66.97 0 362564..364216 + 550 91974795 - RPD_0315 - Na+/H+ antiporter 314 63.15 0 364246..365580 - 444 91974796 - RPD_0316 - ferric reductase-like transmembrane component-like 315 66.59 0 365780..367105 - 441 91974797 ispG RPD_0317 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 316 65.68 0 367135..368049 - 304 91974798 - RPD_0318 - hypothetical protein 317 67.48 0 368182..368670 - 162 91974799 - RPD_0319 - zinc uptake regulator ZUR 318 70.06 +1 368865..370073 - 402 91974800 - RPD_0320 - beta-ketoadipyl CoA thiolase 319 70.35 +1 370238..373009 + 923 91974801 - RPD_0321 - DNA mismatch repair protein 320 64.68 0 373035..374597 - 520 91974802 - RPD_0322 - Acetyl-CoA hydrolase 321 63.39 0 375533..376999 - 488 91974803 - RPD_0323 - putative Omp2b porin 322 60.39 -1 377484..377993 + 169 91974804 - RPD_0324 - regulatory protein, MarR 323 64.65 0 378222..379013 - 263 91974805 - RPD_0325 - hypothetical protein 324 69.41 +1 379721..380266 + 181 91974806 - RPD_0326 - hypothetical protein 325 61.01 -1 380435..381637 + 400 91974807 - RPD_0327 - histidine kinase, dimerisation/phosphoacceptor 326 59.23 -1 381649..382092 + 147 91974808 - RPD_0328 - response regulator receiver 327 61.70 0 382089..382913 + 274 91974809 - RPD_0329 - PRC-barrel 328 66.67 0 383067..384146 - 359 91974810 - RPD_0330 - putative ammonia monooxygenase 329 65.29 0 384313..384822 + 169 91974811 - RPD_0331 - hypothetical protein 330 68.75 +1 384922..385305 + 127 91974812 - RPD_0332 - LrgA 331 67.77 0 385302..386024 + 240 91974813 - RPD_0333 - LrgB-like protein 332 68.16 0 386266..386733 + 155 91974814 - RPD_0334 - hypothetical protein 333 69.27 +1 386777..387850 - 357 91974815 - RPD_0335 - phospholipase/carboxylesterase 334 63.83 0 388007..389698 - 563 91974816 - RPD_0336 - chemotaxis sensory transducer 335 64.78 0 390010..391701 - 563 91974817 - RPD_0337 - chemotaxis sensory transducer 336 64.94 0 392283..393380 + 365 91974818 - RPD_0338 - hypothetical protein 337 70.02 +1 393530..394186 - 218 91974819 - RPD_0339 - anti-sigma factor ChrR, putative 338 61.90 0 394183..394770 - 195 91974820 - RPD_0340 - RNA polymerase sigma factor RpoE 339 63.00 0 395002..395274 + 90 91974821 - RPD_0341 - hypothetical protein 340 61.65 0 395596..396153 - 185 91974822 - RPD_0342 - HNH endonuclease 341 67.47 0 396439..397437 + 332 91974823 - RPD_0343 - cysteine synthase A 342 69.29 +1 397736..399184 - 482 91974824 - RPD_0344 - glycogen/starch synthases, ADP-glucose type 343 63.29 0 399181..400455 - 424 91974825 glgC RPD_0345 - glucose-1-phosphate adenylyltransferase 344 64.16 0 400757..403072 - 771 91974826 - RPD_0346 - oxidoreductase alpha (molybdopterin) subunit 345 69.44 +1 409676..410614 - 312 91974827 - RPD_0347 - PfkB 346 65.21 0 410826..411650 - 274 91974828 - RPD_0348 - hypothetical protein 347 65.40 0 411884..412120 + 78 91974829 - RPD_0349 - ChaB 348 68.28 0 412315..414354 - 679 91974830 - RPD_0350 - carbamoyl-phosphate synthase L chain, ATP-binding 349 65.73 0 414354..415961 - 535 91974831 - RPD_0351 - propionyl-CoA carboxylase 350 63.27 0 416057..416791 - 244 91974832 - RPD_0352 - short-chain dehydrogenase/reductase SDR 351 59.84 -1 417000..418610 - 536 91974833 - RPD_0353 - AMP-dependent synthetase and ligase 352 58.84 -1 418647..419438 - 263 91974834 - RPD_0354 - enoyl-CoA hydratase/isomerase 353 64.39 0 419471..420262 - 263 91974835 - RPD_0355 - short-chain dehydrogenase/reductase SDR 354 59.80 -1 420259..421437 - 392 91974836 - RPD_0356 - isovaleryl-CoA dehydrogenase 355 59.01 -1 421620..422846 - 408 91974837 - RPD_0357 - extracellular ligand-binding receptor 356 57.40 -2 423299..424021 + 240 91974838 - RPD_0358 - regulatory protein, TetR 357 69.32 +1 424666..425946 + 426 91974839 - RPD_0359 - pseudouridine synthase RluD 358 64.89 0 426165..427064 + 299 91974840 - RPD_0360 - RNA polymerase factor sigma-32 359 60.88 -1 427197..427559 - 120 91974841 - RPD_0361 - hypothetical protein 360 65.22 0 427695..428594 - 299 91974842 - RPD_0362 - beta-lactamase-like 361 66.67 0 428704..429039 + 111 91974843 - RPD_0363 - regulatory protein, ArsR 362 67.03 0 429057..429875 + 272 91974844 - RPD_0364 - hypothetical protein 363 65.24 0 429936..431549 - 537 91974845 - RPD_0365 - phosphoenolpyruvate carboxykinase 364 67.76 0 431739..432473 - 244 91974846 - RPD_0366 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 365 62.39 0 432687..433388 + 233 91974847 - RPD_0367 - winged helix family two component transcriptional regulator 366 67.79 0 433595..435286 + 563 91974848 - RPD_0368 - periplasmic sensor signal transduction histidine kinase 367 68.18 0 435283..435744 + 153 91974849 - RPD_0369 - HPr kinase 368 61.87 0 435884..436342 + 152 91974850 - RPD_0370 - PTS system fructose subfamily IIA component 369 66.07 0 436339..436674 + 111 91974851 - RPD_0371 - phosphotransferase system, HPr 370 69.78 +1 436731..438272 - 513 91974852 - RPD_0372 - hypothetical protein 371 64.19 0 438293..440227 + 644 91974853 - RPD_0373 - GTP-binding protein LepA 372 48.18 -2 440240..440926 + 228 91974854 - RPD_0374 - hypothetical protein 373 67.93 0 441249..441485 + 78 91974855 - RPD_0375 - hypothetical protein 374 64.29 0 441476..441811 + 111 91974856 - RPD_0376 - hypothetical protein 375 67.05 0 441925..443745 + 606 91974857 aceK RPD_0377 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 376 66.80 0 443977..444726 + 249 91974858 - RPD_0378 - CysZ-like protein 377 70.53 +1 445371..446354 + 327 91974859 - RPD_0379 - alpha/beta hydrolase fold 378 68.12 0 446518..448239 + 573 91974860 - RPD_0380 - peptidase S10, serine carboxypeptidase 379 64.74 0 448307..449083 - 258 91974861 - RPD_0381 - endonuclease III 380 62.02 0 449106..449621 + 171 91974862 - RPD_0382 - hypothetical protein 381 70.42 +1 449638..450570 + 310 91974863 - RPD_0383 - methylated-DNA--protein-cysteine methyltransferase 382 66.20 0 450661..452175 + 504 91974864 - RPD_0384 - phosphoglyceromutase 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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